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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
71.2
nTPM
HPA Brain:
69.4
nTPM
GTEx:
71.2
nTPM
FANTOM5:
45.8
Scaled Tags Per Million
Pig:
51.3
nTPM
Mouse:
147.3
nTPM
Allen mouse:
6.8
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
69.4
Sample id
Sample description
nTPM
Amygdala nTPM: 66.4
2517
Female, age 94, left hemisphere
72.2
2814
Male, age 76, right hemisphere
70.2
1987
Female, age 91, left hemisphere
67.5
2695
Female, age 67, right hemisphere
61.9
2514
Male, age 75, right hemisphere
60.0
Basal amygdala nTPM: 64.8
2243
Female, age 91, right hemisphere
72.7
2609
Male, age 75, right hemisphere
70.7
2110
Male, age 80, left hemisphere
67.1
2685
Female, age 94, left hemisphere
64.9
1955
Male, age 76, both hemispheres
61.6
2827
Female, age 67, right hemisphere
51.7
Central amygdala nTPM: 69.4
2826
Female, age 94, left hemisphere
82.0
2515
Male, age 75, right hemisphere
69.0
1905
Male, age 76, both hemispheres
66.8
2239
Male, age 80, left hemisphere
66.5
2701
Female, age 91, right hemisphere
62.7
Corticomedial amygdala nTPM: 63.7
2429
Female, age 94, left hemisphere
67.8
2428
Male, age 75, right hemisphere
67.4
2829
Male, age 80, left hemisphere
66.7
2242
Female, age 91, right hemisphere
64.8
2535
Female, age 67, right hemisphere
59.6
2240
Male, age 76, both hemispheres
55.8
Lateral amygdala nTPM: 67.0
2534
Female, age 94, left hemisphere
81.7
2255
Female, age 91, right hemisphere
69.8
1883
Male, age 76, both hemispheres
67.5
2516
Male, age 75, right hemisphere
66.4
2256
Male, age 80, left hemisphere
63.0
2830
Female, age 67, right hemisphere
53.4
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
71.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 71.2
Samples: 152
Max nTPM: 116.9
Min nTPM: 37.5
Std nTPM: 16.7
Median nTPM: 68.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
116.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
111.4
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
109.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
109.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
109.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
106.8
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
105.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
104.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
102.1
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
101.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
100.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
100.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
100.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
98.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
98.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
96.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
94.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
91.8
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
91.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
89.1
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
89.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
88.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
86.3
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
86.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
85.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
85.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
85.4
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
85.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
85.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
84.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
83.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
83.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
83.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
83.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
82.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
82.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
82.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
82.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
81.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
81.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
81.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
81.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
81.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
81.0
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
80.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
80.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
80.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
78.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
78.9
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
77.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
77.6
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
76.9
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
76.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
76.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
76.4
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
76.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
76.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
75.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
75.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
74.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
73.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
73.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
73.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
73.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
72.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
72.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
72.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
72.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
72.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
71.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
71.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
70.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
69.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
69.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
69.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
68.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
68.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
68.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
68.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
68.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
68.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
67.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
66.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
66.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
66.3
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
66.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
66.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
65.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
65.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
65.2
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
65.1
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
64.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
64.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
63.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
63.2
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
63.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
62.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
62.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
62.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
61.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
61.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
61.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
61.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
61.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
60.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
60.7
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
60.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
60.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
60.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
59.8
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
59.6
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
59.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
59.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
58.6
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
58.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
58.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
58.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
58.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
58.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
58.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
57.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
57.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
56.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
56.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
56.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
56.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
55.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
54.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
54.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
54.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
53.6
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
53.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
53.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
52.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
52.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
52.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
51.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
50.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
50.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
50.0
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
49.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
48.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
48.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
47.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
47.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
46.4
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
46.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
43.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
43.7
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
41.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
40.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
37.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
147.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 147.3
Samples: 4
Max nTPM: 152.5
Min nTPM: 142.4
Sample A
Male
149.4
Sample B
Male
152.5
Sample C
Female
144.8
Sample D
Female
142.4
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.