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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DUS1L is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
95.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
277.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
230.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
225.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
221.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
221.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
220.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
217.7
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
215.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
194.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
191.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
190.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
189.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
189.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
188.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
185.4
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
184.9
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
178.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
176.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
169.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
168.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
166.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
164.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
163.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
162.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
160.6
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
159.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
157.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
156.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
156.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
155.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
151.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
148.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
147.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
147.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
147.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
146.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
145.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
145.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
145.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
144.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
142.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
142.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
141.6
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
140.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
140.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
139.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
138.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
138.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
137.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
136.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
135.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
134.5
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
134.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
133.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
133.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
133.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
132.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
132.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
132.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
131.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
130.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
127.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
127.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
126.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
126.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
126.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
124.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
123.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
122.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
121.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
121.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
121.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
120.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
120.2
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
119.9
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
119.8
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
119.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
118.1
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
117.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
117.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
117.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
115.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
115.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
115.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
115.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
115.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
114.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
114.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
113.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
113.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
113.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
112.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
112.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
112.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
111.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
111.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
111.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
110.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
110.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
109.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
109.4
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
108.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
108.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
107.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
107.5
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
107.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
107.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
107.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
107.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
106.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
106.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
106.6
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
106.3
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
106.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
105.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
105.9
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
105.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
105.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
105.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
104.7
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
104.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
104.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
104.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
104.1
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
104.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
103.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
103.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
103.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
103.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
102.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
102.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
102.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
102.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
101.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
100.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
100.6
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
100.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
99.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
99.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
99.3
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
99.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
99.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
99.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
98.8
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
98.8
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
98.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
98.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
98.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
97.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
97.4
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
97.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
96.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
96.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
96.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
96.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
96.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
96.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
95.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
94.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
94.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
94.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
93.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
93.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
93.3
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
93.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
92.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
92.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
92.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
92.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
91.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
91.2
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
91.2
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
90.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
90.4
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
90.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
90.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
89.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
89.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
89.5
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
89.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
89.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
88.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
87.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
87.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
87.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
87.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
87.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
87.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
87.1
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
87.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
86.8
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
86.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
86.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
86.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
86.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
85.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
85.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
85.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
85.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
84.9
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
84.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
84.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
84.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
84.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
82.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
82.9
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
82.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
82.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
82.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
82.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
82.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
81.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
81.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
81.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
81.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
81.3
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
80.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
80.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
79.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
79.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
79.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
79.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
78.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
78.4
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
78.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
77.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
77.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
77.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
77.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
76.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
75.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
75.5
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
75.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
74.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
74.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
74.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
73.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
72.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
72.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
71.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
71.6
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
71.3
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
71.1
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
71.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
71.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
71.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
70.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
69.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
69.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
69.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
69.2
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
69.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
69.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
68.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
68.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
68.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
68.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
68.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
68.0
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
67.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
67.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
67.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
67.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
66.9
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
66.8
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
66.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
65.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
64.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
64.6
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
64.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
64.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
63.9
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
63.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
63.6
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
63.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
62.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
62.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
62.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
62.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
62.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
62.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
62.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
61.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
61.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
61.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
61.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
61.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
61.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
60.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
60.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
60.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
60.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
60.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
59.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
59.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
59.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
59.2
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
59.1
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
59.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
58.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
58.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
58.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
58.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
58.0
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
57.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
57.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
57.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
57.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
57.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
57.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
57.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
57.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
56.9
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
56.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
56.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
55.9
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
55.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
55.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
55.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
55.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
54.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
54.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
54.7
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
54.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
54.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
54.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
53.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
53.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
53.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
53.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
52.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
51.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
50.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
50.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
49.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
49.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
48.6
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
48.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
48.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
48.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
47.4
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
47.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
47.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
46.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
46.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
44.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
44.0
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
44.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
44.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
43.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
42.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
41.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
40.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
39.8
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
38.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
38.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
37.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
37.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
36.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
35.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
35.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DUS1L is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
67.6
Number of samples
231
Samples
Sample
Description
TPM
DO50816
0 years, male, NA, stage:2, alive, 390 days
240.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
204.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
192.2
DO50814
0 years, male, NA, stage:3, alive, 420 days
183.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
177.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
158.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
157.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
156.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
146.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
145.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
141.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
138.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
137.7
DO50813
0 years, male, NA, stage:2, alive, 420 days
137.4
DO23532
0 years, female, NA, stage:1, alive, 960 days
134.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
132.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
130.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
125.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
122.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
122.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
118.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
115.5
DO50817
0 years, male, NA, stage:2, alive, 390 days
115.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
114.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
112.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
111.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
110.5
DO50832
0 years, male, NA, stage:3, alive, 90 days
109.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
109.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
105.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
105.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
104.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
102.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
100.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
100.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
100.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
98.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
97.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
96.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
92.8
DO45267
0 years, male, NA, stage:3, dead, 570 days
92.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
91.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
91.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
89.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
88.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
88.5
DO45269
0 years, male, NA, stage:3, alive, 750 days
88.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
88.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
87.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
86.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
85.8
DO45127
0 years, male, NA, stage:3, dead, 420 days
84.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
83.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
83.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
82.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
82.8
DO45133
0 years, male, NA, stage:3, dead, 660 days
82.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
82.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
81.9
DO23536
0 years, male, NA, stage:2, alive, 930 days
81.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
79.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
79.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
79.1
DO48747
0 years, male, NA, stage:3, alive, 540 days
79.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
78.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
77.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
77.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
76.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
75.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
75.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
74.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
74.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
73.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
73.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
73.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
73.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
73.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
73.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
72.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
72.7
DO45235
0 years, female, NA, stage:1, alive, 900 days
71.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
71.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
71.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
70.5
DO45299
0 years, female, NA, stage:1, alive, 1440 days
70.4
DO45227
0 years, female, NA, stage:2, alive, 1020 days
69.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
68.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
66.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
66.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
66.2
DO23548
0 years, female, NA, stage:1, alive, 840 days
65.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
65.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
64.1
DO45245
0 years, female, NA, stage:2, dead, 240 days
64.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
63.8
DO48693
0 years, male, NA, stage:2, alive, 900 days
63.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
63.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
62.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
62.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
62.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
62.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
62.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
62.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
62.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
62.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
61.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
61.1
DO48672
0 years, male, NA, stage:2, alive, 450 days
61.0
DO23545
0 years, male, NA, stage:2, dead, 570 days
60.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
59.1
DO45107
0 years, female, NA, stage:2, alive, 1710 days
59.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
59.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
58.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
58.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
58.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
57.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
57.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
56.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
56.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
56.2
DO23527
0 years, male, NA, stage:1, alive, 1050 days
56.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
55.9
DO45103
0 years, male, NA, stage:3, alive, 450 days
55.5
DO23541
0 years, male, NA, stage:2, alive, 930 days
54.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
54.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
54.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
54.2
DO227643
0 years, male, NA, stage:2, alive, 1260 days
54.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
53.9
DO50825
0 years, male, NA, stage:2, alive, 390 days
53.7
DO48743
0 years, female, NA, stage:2, alive, 570 days
53.7
DO45307
0 years, female, NA, stage:4, dead, 240 days
53.6
DO48719
0 years, male, NA, stage:2, alive, 690 days
53.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
53.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
53.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
52.7
DO48736
0 years, female, NA, stage:1, alive, 600 days
52.7
DO45119
0 years, male, NA, stage:3, dead, 510 days
52.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
52.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
52.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
52.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
51.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
51.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
50.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
50.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
50.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
50.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
49.9
DO45121
0 years, male, NA, stage:3, alive, 1530 days
49.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
49.6
DO45285
0 years, male, NA, stage:3, alive, 480 days
48.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
48.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
48.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
48.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
48.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
48.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
47.4
DO23535
0 years, male, NA, stage:1, alive, 960 days
47.4
DO45179
0 years, female, NA, stage:2, alive, 600 days
47.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
47.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
46.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
46.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
46.9
DO45099
0 years, male, NA, stage:3, alive, 1590 days
46.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
45.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
45.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
45.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
45.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
45.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
45.4
DO45263
0 years, male, NA, stage:3, dead, 270 days
44.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
44.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
43.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
42.9
DO48727
0 years, female, NA, stage:2, dead, 390 days
42.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
42.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
42.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
41.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
41.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
41.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
41.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
40.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
40.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
40.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
40.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
40.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
39.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
39.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
38.5
DO45197
0 years, male, NA, stage:2, alive, 1170 days
38.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
38.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
38.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
37.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
37.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
37.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
37.2
DO45231
0 years, male, NA, stage:2, alive, 930 days
36.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
36.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
36.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
36.3
DO50803
0 years, female, NA, stage:1, alive, 540 days
36.0
DO48725
0 years, male, NA, stage:1, alive, 780 days
36.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
35.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
35.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
34.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
34.2
DO45233
0 years, male, NA, stage:3, alive, 900 days
34.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
33.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
33.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
33.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
32.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
32.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
31.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
31.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
31.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
30.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
30.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
29.8
DO45091
0 years, male, NA, stage:2, dead, 1320 days
29.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
29.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
29.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
29.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
28.3
DO45195
0 years, male, NA, stage:1, alive, 390 days
28.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
27.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
27.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
26.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
23.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
23.3
DO23551
0 years, male, NA, stage:3, dead, 150 days
22.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
22.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
477
Tumor
1.1
533
Tumor
1.0
695
Tumor
0.8
423
Tumor
0.7
411
Tumor
0.7
355
Tumor
0.7
435
Tumor
0.7
425
Tumor
0.7
1021
Tumor
0.7
433
Tumor
0.7
957
Tumor
0.6
497
Tumor
0.6
525
Tumor
0.6
571
Tumor
0.6
953
Tumor
0.6
123
Tumor
0.6
977
Tumor
0.6
471
Tumor
0.6
465
Tumor
0.5
277
Tumor
0.5
615
Tumor
0.5
271
Tumor
0.5
923
Tumor
0.5
777
Tumor
0.5
491
Tumor
0.5
327
Tumor
0.4
222
Normal
0.4
227
Tumor
0.4
353
Tumor
0.4
741
Tumor
0.4
861
Tumor
0.4
964
Normal
0.4
112
Tumor
0.4
468
Normal
0.4
365
Tumor
0.3
981
Tumor
0.3
818
Normal
0.3
858
Normal
0.3
627
Tumor
0.3
873
Tumor
0.3
162
Normal
0.3
431
Tumor
0.3
221
Tumor
0.3
463
Tumor
0.3
1041
Tumor
0.3
267
Tumor
0.3
388
Normal
0.3
937
Tumor
0.3
186
Normal
0.3
824
Normal
0.3
745
Tumor
0.3
172
Normal
0.3
685
Tumor
0.3
473
Tumor
0.3
951
Tumor
0.3
1026
Normal
0.3
1025
Tumor
0.3
341
Tumor
0.3
912
Normal
0.3
213
Tumor
0.3
513
Tumor
0.2
877
Tumor
0.2
196
Normal
0.2
461
Tumor
0.2
545
Tumor
0.2
342
Normal
0.2
361
Tumor
0.2
467
Tumor
0.2
956
Normal
0.2
452
Normal
0.2
1014
Normal
0.2
148
Normal
0.2
553
Tumor
0.2
214
Normal
0.2
563
Tumor
0.2
138
Normal
0.2
636
Normal
0.2
944
Normal
0.2
642
Normal
0.2
515
Tumor
0.2
938
Normal
0.2
464
Normal
0.2
354
Normal
0.2
136
Normal
0.2
925
Tumor
0.2
456
Normal
0.2
131
Tumor
0.2
573
Tumor
0.2
817
Tumor
0.2
1015
Tumor
0.2
527
Tumor
0.2
865
Tumor
0.2
432
Normal
0.2
395
Tumor
0.2
714
Normal
0.2
737
Tumor
0.2
195
Tumor
0.2
443
Tumor
0.2
357
Tumor
0.2
351
Tumor
0.2
867
Tumor
0.2
618
Normal
0.2
778
Normal
0.2
363
Tumor
0.2
356
Normal
0.2
526
Normal
0.1
358
Normal
0.1
258
Normal
0.1
132
Normal
0.1
882
Normal
0.1
493
Tumor
0.1
554
Normal
0.1
1042
Normal
0.1
755
Tumor
0.1
968
Normal
0.1
746
Normal
0.1
141
Tumor
0.1
343
Tumor
0.1
952
Normal
0.1
466
Normal
0.1
394
Normal
0.1
161
Tumor
0.1
1031
Tumor
0.1
218
Normal
0.1
146
Normal
0.1
661
Tumor
0.1
483
Tumor
0.1
884
Normal
0.1
785
Tumor
0.1
756
Normal
0.1
298
Normal
0.1
455
Tumor
0.1
671
Tumor
0.1
387
Tumor
0.1
331
Tumor
0.1
913
Tumor
0.1
723
Tumor
0.1
698
Normal
0.1
866
Normal
0.1
616
Normal
0.1
436
Normal
0.1
1016
Normal
0.1
228
Normal
0.1
722
Normal
0.1
261
Tumor
0.1
516
Normal
0.1
352
Normal
0.1
878
Normal
0.1
446
Normal
0.1
396
Normal
0.1
366
Normal
0.1
881
Tumor
0.1
462
Normal
0.1
982
Normal
0.1
534
Normal
0.1
786
Normal
0.1
546
Normal
0.1
863
Tumor
0.1
268
Normal
0.1
967
Tumor
0.1
1022
Normal
0.1
427
Tumor
0.1
984
Normal
0.1
444
Normal
0.1
958
Normal
0.1
874
Normal
0.1
744
Normal
0.1
451
Tumor
0.1
127
Tumor
0.1
187
Tumor
0.1
278
Normal
0.0
147
Tumor
0.0
954
Normal
0.0
564
Normal
0.0
728
Normal
0.0
344
Normal
0.0
857
Tumor
0.0
472
Normal
0.0
223
Tumor
0.0
862
Normal
0.0
976
Normal
0.0
447
Tumor
0.0
328
Normal
0.0
217
Tumor
0.0
224
Normal
0.0
983
Tumor
0.0
574
Normal
0.0
568
Normal
0.0
696
Normal
0.0
864
Normal
0.0
498
Normal
0.0
212
Normal
0.0
883
Tumor
0.0
724
Normal
0.0
523
Tumor
0.0
955
Tumor
0.0
386
Normal
0.0
482
Normal
0.0
142
Normal
0.0
1046
Normal
0.0
868
Normal
0.0
474
Normal
0.0
816
Normal
0.0
362
Normal
0.0
392
Normal
0.0
814
Normal
0.0
128
Normal
0.0
518
Normal
0.0
232
Normal
0.0
393
Tumor
0.0
911
Tumor
0.0
852
Normal
0.0
125
Tumor
0.0
137
Tumor
0.0
558
Normal
0.0
314
Normal
0.0
813
Tumor
0.0
664
Normal
0.0
635
Tumor
0.0
647
Tumor
0.0
284
Normal
0.0
412
Normal
0.0
628
Normal
0.0
135
Tumor
0.0
188
Normal
0.0
514
Normal
0.0
434
Normal
0.0
376
Normal
0.0
428
Normal
0.0
414
Normal
0.0
538
Normal
-0.1
665
Tumor
-0.1
283
Tumor
-0.1
697
Tumor
-0.1
481
Tumor
-0.1
742
Normal
-0.1
416
Normal
-0.1
286
Normal
-0.1
445
Tumor
-0.1
914
Normal
-0.1
391
Tumor
-0.1
823
Tumor
-0.1
297
Tumor
-0.1
966
Normal
-0.1
918
Normal
-0.1
686
Normal
-0.1
492
Normal
-0.1
917
Tumor
-0.1
191
Tumor
-0.1
524
Normal
-0.1
368
Normal
-0.1
926
Normal
-0.1
257
Tumor
-0.1
557
Tumor
-0.1
528
Normal
-0.1
672
Normal
-0.1
648
Normal
-0.1
922
Normal
-0.1
662
Normal
-0.1
384
Normal
-0.1
185
Tumor
-0.1
484
Normal
-0.1
924
Normal
-0.1
145
Tumor
-0.1
963
Tumor
-0.1
312
Normal
-0.1
364
Normal
-0.1
666
Normal
-0.1
424
Normal
-0.1
272
Normal
-0.1
192
Normal
-0.1
114
Normal
-0.1
426
Normal
-0.1
494
Normal
-0.1
978
Normal
-0.1
1028
Normal
-0.1
738
Normal
-0.1
231
Tumor
-0.1
815
Tumor
-0.1
727
Tumor
-0.2
1032
Normal
-0.2
713
Tumor
-0.2
915
Tumor
-0.2
965
Tumor
-0.2
975
Tumor
-0.2
916
Normal
-0.2
126
Normal
-0.2
488
Normal
-0.2
517
Tumor
-0.2
332
Normal
-0.2
262
Normal
-0.2
716
Normal
-0.2
572
Normal
-0.2
921
Tumor
-0.2
567
Tumor
-0.2
311
Tumor
-0.2
111
Normal
-0.2
385
Tumor
-0.2
383
Tumor
-0.2
313
Tumor
-0.2
851
Tumor
-0.2
375
Tumor
-0.2
536
Normal
-0.2
113
Tumor
-0.3
721
Tumor
-0.3
1043
Tumor
-0.3
1045
Tumor
-0.3
943
Tumor
-0.3
663
Tumor
-0.3
124
Normal
-0.3
1013
Tumor
-0.3
415
Tumor
-0.3
413
Tumor
-0.3
211
Tumor
-0.3
641
Tumor
-0.3
448
Normal
-0.3
487
Tumor
-0.3
422
Normal
-0.4
478
Normal
-0.4
285
Tumor
-0.4
171
Tumor
-0.4
743
Tumor
-0.4
1044
Normal
-0.4
537
Tumor
-0.4
535
Tumor
-0.5
367
Tumor
-0.5
421
Tumor
-0.5
715
Tumor
-0.6
617
Tumor
-0.6
1027
Tumor
-0.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
