HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:19.0 nTPM
HPA Brain:25.0 nTPM
GTEx:19.0 nTPM
FANTOM5:26.3 Scaled Tags Per Million
Pig:9.0 nTPM
Mouse:28.7 nTPM
Allen mouse:4.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041995Antibody HPA042988
Glial cells LowNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 25.0
Sample id Sample description nTPM
Hippocampus
nTPM: 24.0
2529 Female, age 94, left hemisphere 26.8
2148 Female, age 91, left hemisphere 26.1
1855 Male, age 76, left hemisphere 24.9
2621 Female, age 67, right hemisphere 23.2
1911 Female, age 85, right hemisphere 22.9
1898 Male, age 80, left hemisphere 20.1
Dentate gyrus
nTPM: 23.3
2530 Female, age 94, left hemisphere 25.8
2528 Male, age 74, both hemispheres 23.6
2531 Female, age 67, both hemispheres 23.1
2246 Female, age 85, both hemispheres 22.7
1927 Female, age 91, both hemispheres 22.4
2010 Male, age 76, both hemispheres 22.2
Entorhinal gyrus
nTPM: 23.0
2613 Female, age 94, left hemisphere 25.3
2117 Female, age 91, right hemisphere 24.1
2764 Male, age 80, right hemisphere 23.4
1787 Male, age 76, left hemisphere 23.1
2686 Male, age 75, right hemisphere 22.5
1938 Female, age 85, left hemisphere 19.8
Hippocampus, CA1
nTPM: 23.0
2082 Female, age 91, right hemisphere 25.8
1873 Female, age 85, both hemispheres 22.9
2045 Male, age 76, both hemispheres 22.6
2749 Male, age 80, left hemisphere 22.2
2527 Male, age 74, both hemispheres 21.3
Hippocampus, CA2
nTPM: 22.8
2113 Female, age 91, right hemisphere 25.5
1892 Male, age 76, both hemispheres 24.2
2437 Female, age 94, left hemisphere 23.6
1940 Female, age 85, left hemisphere 22.5
1963 Male, age 80, left hemisphere 21.2
2249 Male, age 74, both hemispheres 19.8
Hippocampus, CA3
nTPM: 25.0
2620 Female, age 94, left hemisphere 32.5
2861 Female, age 67, both hemispheres 26.3
1867 Male, age 76, both hemispheres 23.3
1891 Female, age 85, both hemispheres 22.8
2137 Male, age 80, left hemisphere 22.5
2436 Male, age 74, both hemispheres 22.4
Parahippocampal cortex
nTPM: 21.6
2622 Female, age 67, right hemisphere 25.2
2692 Male, age 74, both hemispheres 23.6
2532 Female, age 72, left hemisphere 21.7
2018 Male, age 76, both hemispheres 21.5
2245 Female, age 91, both hemispheres 21.5
1990 Female, age 91, right hemisphere 21.4
2250 Female, age 67, right hemisphere 21.2
2693 Female, age 94, both hemispheres 20.1
1933 Female, age 85, both hemispheres 19.7
1850 Male, age 80, both hemispheres 19.6
Perirhinal gyrus
nTPM: 19.7
2848 Male, age 76, right hemisphere 22.0
2521 Female, age 94, right hemisphere 19.9
1794 Male, age 80, right hemisphere 19.3
1847 Female, age 91, left hemisphere 19.3
1841 Female, age 85, right hemisphere 18.2
Subiculum
nTPM: 23.7
2729 Female, age 91, right hemisphere 27.0
2619 Male, age 74, both hemispheres 25.3
2042 Male, age 76, both hemispheres 24.0
2438 Female, age 94, left hemisphere 22.8
1901 Male, age 80, both hemispheres 22.0
1977 Female, age 85, both hemispheres 21.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 19.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.0
Samples: 197

Max nTPM: 33.8
Min nTPM: 8.4
Std nTPM: 4.7
Median nTPM: 18.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 33.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 32.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 28.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 28.7
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 28.7
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 28.7
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 28.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 28.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 28.3
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 28.1
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 27.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 26.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.3
FF:10153-102I9 76 years, female 34.9
FF:10169-103B7 60 years, female 17.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 9.0
Pig sample Sample description nTPM
Subiculum
nTPM: 7.6
Samples: 4

Max nTPM: 8.7
Min nTPM: 7.0
Sample A Female 8.7
Sample B Female 7.2
Sample C Male 7.4
Sample D Male 7.0
Dorsal hippocampus
nTPM: 8.9
Samples: 4

Max nTPM: 10.0
Min nTPM: 7.4
Sample A Female 10.0
Sample B Female 8.8
Sample C Male 9.2
Sample D Male 7.4
Entorhinal cortex
nTPM: 7.5
Samples: 4

Max nTPM: 8.4
Min nTPM: 6.8
Sample A Female 8.4
Sample B Female 7.7
Sample C Male 7.1
Sample D Male 6.8
Ventral hippocampus
nTPM: 9.0
Samples: 4

Max nTPM: 10.8
Min nTPM: 6.3
Sample A Female 8.9
Sample B Female 6.3
Sample C Male 10.8
Sample D Male 9.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 28.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.5
Samples: 4

Max nTPM: 31.9
Min nTPM: 26.1
Sample A Male 26.1
Sample B Male 29.4
Sample C Female 26.5
Sample D Female 31.9
Hippocampal formation
nTPM: 28.7
Samples: 4

Max nTPM: 30.1
Min nTPM: 25.9
Sample A Male 25.9
Sample B Male 30.1
Sample C Female 29.2
Sample D Female 29.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.8
532670 Antisense, RP_040825_01_C05, Mouse strain C57BL/6J (56 days, male) 4.8

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