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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
INO80E is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
80.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
78.1
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
58.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
51.5
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
49.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
49.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
49.1
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
48.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
47.9
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
47.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
47.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
46.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
46.4
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
45.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
45.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
45.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
45.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
44.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
43.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
42.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
42.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
42.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
41.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
40.9
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
40.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
40.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
39.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
39.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
39.1
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
38.8
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
38.5
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
37.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
37.3
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
37.1
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
36.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
36.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
36.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
36.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
36.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
35.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
35.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
35.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
35.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
35.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
35.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
35.0
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
34.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
34.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
34.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
34.3
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
34.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
34.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
33.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
33.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
33.6
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
33.5
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
33.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
33.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
32.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
32.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
32.7
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
32.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
32.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
32.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
31.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
31.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
31.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
31.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
31.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
30.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
30.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
30.8
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
30.8
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
30.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
30.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
30.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
30.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
30.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
30.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
30.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
30.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
29.9
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
29.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
29.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
29.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
29.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
29.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
29.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
29.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
29.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
29.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
29.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
28.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
28.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
28.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
28.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
28.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
28.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
28.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
28.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
28.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
28.2
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
28.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
28.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
28.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
27.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
27.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
27.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
27.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
27.3
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
27.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
27.1
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
27.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
26.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
26.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
26.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
26.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
26.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
26.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
26.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
26.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
26.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
26.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
26.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
25.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
25.9
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
25.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
25.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
25.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
25.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
25.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
25.6
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
25.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
25.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
25.2
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
25.1
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
25.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
24.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
24.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
24.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
24.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
24.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
24.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
24.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
24.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
24.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
24.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
23.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
23.9
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
23.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
23.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
23.6
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
23.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
23.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
23.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
23.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
23.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
23.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
23.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
23.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
23.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
23.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
23.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
23.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
23.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
22.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
22.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
22.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
22.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
22.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
22.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
22.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
22.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
22.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
22.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
22.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
22.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
22.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
22.3
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
22.2
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
22.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
22.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
22.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
22.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
22.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
22.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
21.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
21.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
21.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
21.7
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
21.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
21.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
21.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
21.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
21.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
21.4
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
21.4
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
21.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
21.3
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
21.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
21.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
20.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
20.8
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
20.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
20.7
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
20.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
20.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
20.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
20.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
20.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
20.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
20.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
20.5
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
20.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
20.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
20.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
20.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
20.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
20.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
20.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
20.3
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
20.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
20.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
20.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
20.2
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
20.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
19.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
19.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
19.8
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
19.8
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
19.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
19.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
19.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
19.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
19.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
19.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
19.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
19.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
19.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
19.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
19.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
19.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
18.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
18.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
18.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
18.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
18.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
18.7
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
18.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
18.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
18.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
18.5
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
18.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
18.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
18.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
18.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
18.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
18.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
18.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
18.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
17.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
17.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
17.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
17.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
17.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
17.7
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
17.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
17.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
17.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
17.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
17.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
17.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
17.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
17.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
17.1
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
17.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
17.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
16.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
16.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
16.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
16.1
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
16.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
16.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
16.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
16.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
16.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
16.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
15.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
15.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
15.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
15.8
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
15.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
15.6
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
15.6
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
15.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
15.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
15.5
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
15.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
15.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
15.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
15.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
15.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
15.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
14.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
14.9
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
14.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
14.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
14.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
14.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
14.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
14.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
14.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
14.3
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
14.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
14.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
14.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
14.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
14.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
14.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
14.0
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
13.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
13.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
13.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
13.5
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
13.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
13.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
13.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
13.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
13.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
13.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
13.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
13.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
13.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
13.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
13.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
12.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
12.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
12.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
12.5
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
12.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
12.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
12.4
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
12.3
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
12.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
12.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
11.4
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
11.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
11.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
11.1
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
11.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
10.9
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
10.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
10.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
10.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
10.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
10.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
9.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
9.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
9.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
8.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
8.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
INO80E is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.1
Number of samples
231
Samples
Sample
Description
TPM
DO23532
0 years, female, NA, stage:1, alive, 960 days
134.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
113.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
112.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
86.6
DO48747
0 years, male, NA, stage:3, alive, 540 days
85.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
82.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
81.7
DO23533
0 years, male, NA, stage:2, alive, 900 days
80.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
80.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
79.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
71.9
DO45101
0 years, male, NA, stage:2, alive, 1680 days
71.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
70.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
68.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
66.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
64.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
64.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
63.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
63.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
62.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
61.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
61.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
61.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
60.0
DO50811
0 years, male, NA, stage:1, alive, 450 days
59.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
59.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
58.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
57.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
56.8
DO23543
0 years, male, NA, stage:2, alive, 1020 days
56.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
56.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
55.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
54.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
52.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
52.8
DO23547
0 years, male, NA, stage:1, alive, 1020 days
52.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
52.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
51.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
51.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
50.2
DO48677
0 years, male, NA, stage:3, alive, 1140 days
49.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
49.7
DO45305
0 years, male, NA, stage:4, alive, 300 days
49.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
47.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
47.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
46.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
46.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
46.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
46.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
45.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
45.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
45.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
44.9
DO23549
0 years, male, NA, stage:3, alive, 990 days
44.8
DO45307
0 years, female, NA, stage:4, dead, 240 days
44.3
DO50798
0 years, male, NA, stage:3, dead, 30 days
44.2
DO45287
0 years, male, NA, stage:1, alive, 390 days
43.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
43.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
41.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
41.4
DO45303
0 years, female, NA, stage:3, alive, 990 days
40.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
40.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
40.2
DO45279
0 years, male, NA, stage:3, alive, 1290 days
40.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
39.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
39.5
DO45273
0 years, male, NA, stage:2, alive, 480 days
39.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
38.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
38.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
38.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
38.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
37.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
37.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
37.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
36.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
36.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
36.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
35.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
35.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
35.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
35.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
35.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
34.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
34.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
34.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
34.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
34.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
34.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
33.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
33.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
33.2
DO45243
0 years, female, NA, stage:3, alive, 930 days
32.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
31.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
31.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
31.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
31.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
31.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
30.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
30.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
30.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
30.4
DO45099
0 years, male, NA, stage:3, alive, 1590 days
30.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
30.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
30.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
30.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
29.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
29.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
29.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
29.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
29.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
29.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
29.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
29.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
29.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
28.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
28.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
28.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
28.2
DO48672
0 years, male, NA, stage:2, alive, 450 days
28.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
28.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
28.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
27.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
27.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
27.3
DO23510
0 years, female, NA, stage:2, alive, 870 days
27.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
27.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
27.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
27.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
27.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
27.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
26.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
26.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
26.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
26.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
26.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
26.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
26.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
26.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
26.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
26.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
25.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
25.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
25.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
25.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
25.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
25.4
DO45163
0 years, male, NA, stage:2, alive, 960 days
25.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
25.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
25.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
24.9
DO45201
0 years, male, NA, stage:1, alive, 900 days
24.5
DO45153
0 years, female, NA, stage:2, alive, 1380 days
24.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
24.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
24.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
24.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
24.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
24.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
24.0
DO50787
0 years, male, NA, stage:3, alive, 480 days
23.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
23.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
23.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
23.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
22.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
22.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
22.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
22.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
22.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
21.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
21.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
21.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
21.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
21.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
21.2
DO45199
0 years, female, NA, stage:2, alive, 1350 days
21.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
20.9
DO45173
0 years, male, NA, stage:3, alive, 1170 days
20.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
20.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
20.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
20.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
19.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
19.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
19.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
19.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
19.2
DO23518
0 years, male, NA, stage:2, alive, 1320 days
19.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
18.9
DO45233
0 years, male, NA, stage:3, alive, 900 days
18.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
18.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
18.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
18.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
18.0
DO45135
0 years, male, NA, stage:1, alive, 1410 days
17.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
17.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
17.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
17.3
DO45123
0 years, female, NA, stage:2, dead, 570 days
17.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
17.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
16.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
16.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
16.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
16.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
16.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
16.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
16.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
16.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
15.8
DO45177
0 years, female, NA, stage:3, alive, 1260 days
15.4
DO23517
0 years, male, NA, stage:2, alive, 1200 days
15.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
15.3
DO45213
0 years, male, NA, stage:1, alive, 1200 days
15.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
15.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
15.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
15.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
15.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
15.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
13.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
13.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
13.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
12.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
12.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
12.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
11.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
11.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
11.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
11.8
DO45183
0 years, female, NA, stage:2, dead, 570 days
10.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
9.0
DO45191
0 years, female, NA, stage:2, alive, 1200 days
8.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
8.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
8.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
7.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
661
Tumor
1.2
951
Tumor
1.0
533
Tumor
0.9
497
Tumor
0.9
977
Tumor
0.8
545
Tumor
0.8
983
Tumor
0.8
131
Tumor
0.7
865
Tumor
0.6
917
Tumor
0.6
413
Tumor
0.6
487
Tumor
0.6
1031
Tumor
0.6
953
Tumor
0.6
943
Tumor
0.5
523
Tumor
0.5
817
Tumor
0.5
537
Tumor
0.5
861
Tumor
0.5
937
Tumor
0.5
873
Tumor
0.5
483
Tumor
0.5
663
Tumor
0.5
877
Tumor
0.5
467
Tumor
0.5
925
Tumor
0.5
513
Tumor
0.5
492
Normal
0.5
385
Tumor
0.5
1015
Tumor
0.5
427
Tumor
0.5
955
Tumor
0.4
527
Tumor
0.4
921
Tumor
0.4
815
Tumor
0.4
285
Tumor
0.4
515
Tumor
0.4
647
Tumor
0.4
1013
Tumor
0.4
923
Tumor
0.4
212
Normal
0.4
1041
Tumor
0.4
498
Normal
0.4
525
Tumor
0.4
981
Tumor
0.4
493
Tumor
0.4
286
Normal
0.4
465
Tumor
0.4
553
Tumor
0.3
867
Tumor
0.3
491
Tumor
0.3
224
Normal
0.3
1027
Tumor
0.3
1021
Tumor
0.3
881
Tumor
0.3
671
Tumor
0.3
488
Normal
0.3
268
Normal
0.3
231
Tumor
0.3
852
Normal
0.3
913
Tumor
0.3
863
Tumor
0.3
313
Tumor
0.2
911
Tumor
0.2
857
Tumor
0.2
538
Normal
0.2
1025
Tumor
0.2
952
Normal
0.2
267
Tumor
0.2
524
Normal
0.2
883
Tumor
0.2
297
Tumor
0.2
283
Tumor
0.2
956
Normal
0.2
228
Normal
0.2
516
Normal
0.2
874
Normal
0.2
311
Tumor
0.2
1026
Normal
0.2
395
Tumor
0.2
232
Normal
0.2
957
Tumor
0.2
665
Tumor
0.2
135
Tumor
0.2
137
Tumor
0.2
391
Tumor
0.2
975
Tumor
0.2
954
Normal
0.2
258
Normal
0.2
976
Normal
0.2
387
Tumor
0.2
517
Tumor
0.2
484
Normal
0.2
211
Tumor
0.2
468
Normal
0.1
277
Tumor
0.1
1028
Normal
0.1
425
Tumor
0.1
271
Tumor
0.1
331
Tumor
0.1
534
Normal
0.1
494
Normal
0.1
824
Normal
0.1
978
Normal
0.1
916
Normal
0.1
554
Normal
0.1
858
Normal
0.1
866
Normal
0.1
984
Normal
0.1
141
Tumor
0.1
466
Normal
0.1
518
Normal
0.1
966
Normal
0.1
982
Normal
0.1
1014
Normal
0.1
546
Normal
0.1
963
Tumor
0.1
672
Normal
0.1
878
Normal
0.1
421
Tumor
0.0
514
Normal
0.0
816
Normal
0.0
528
Normal
0.0
938
Normal
0.0
455
Tumor
0.0
958
Normal
0.0
262
Normal
0.0
851
Tumor
0.0
423
Tumor
0.0
662
Normal
0.0
1042
Normal
0.0
145
Tumor
0.0
393
Tumor
0.0
456
Normal
0.0
862
Normal
0.0
915
Tumor
0.0
823
Tumor
0.0
261
Tumor
0.0
463
Tumor
0.0
284
Normal
-0.1
272
Normal
-0.1
818
Normal
-0.1
868
Normal
-0.1
965
Tumor
-0.1
223
Tumor
-0.1
968
Normal
-0.1
298
Normal
-0.1
1016
Normal
-0.1
388
Normal
-0.1
526
Normal
-0.1
394
Normal
-0.1
1032
Normal
-0.1
864
Normal
-0.1
967
Tumor
-0.1
926
Normal
-0.1
464
Normal
-0.1
964
Normal
-0.1
386
Normal
-0.1
1022
Normal
-0.1
332
Normal
-0.1
278
Normal
-0.1
944
Normal
-0.1
882
Normal
-0.1
922
Normal
-0.1
924
Normal
-0.2
451
Tumor
-0.2
136
Normal
-0.2
884
Normal
-0.2
664
Normal
-0.2
426
Normal
-0.2
314
Normal
-0.2
914
Normal
-0.2
452
Normal
-0.2
138
Normal
-0.2
666
Normal
-0.2
227
Tumor
-0.2
648
Normal
-0.2
142
Normal
-0.2
146
Normal
-0.2
912
Normal
-0.2
312
Normal
-0.2
396
Normal
-0.2
422
Normal
-0.2
257
Tumor
-0.2
424
Normal
-0.2
132
Normal
-0.3
392
Normal
-0.3
918
Normal
-0.3
428
Normal
-0.4
414
Normal
-0.5
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
352
Normal
N/A
473
Tumor
N/A
111
Normal
N/A
353
Tumor
N/A
474
Normal
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
363
Tumor
N/A
364
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
125
Tumor
N/A
367
Tumor
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
383
Tumor
N/A
384
Normal
N/A
147
Tumor
N/A
148
Normal
N/A
713
Tumor
N/A
714
Normal
N/A
715
Tumor
N/A
716
Normal
N/A
161
Tumor
N/A
162
Normal
N/A
721
Tumor
N/A
722
Normal
N/A
723
Tumor
N/A
724
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
615
Tumor
N/A
616
Normal
N/A
737
Tumor
N/A
617
Tumor
N/A
738
Normal
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
741
Tumor
N/A
742
Normal
N/A
1046
Normal
N/A
743
Tumor
N/A
1045
Tumor
N/A
744
Normal
N/A
745
Tumor
N/A
746
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
755
Tumor
N/A
635
Tumor
N/A
756
Normal
N/A
636
Normal
N/A
641
Tumor
N/A
642
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
535
Tumor
N/A
777
Tumor
N/A
415
Tumor
N/A
536
Normal
N/A
778
Normal
N/A
416
Normal
N/A
785
Tumor
N/A
786
Normal
N/A
431
Tumor
N/A
432
Normal
N/A
433
Tumor
N/A
434
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
443
Tumor
N/A
564
Normal
N/A
685
Tumor
N/A
444
Normal
N/A
686
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
567
Tumor
N/A
447
Tumor
N/A
568
Normal
N/A
327
Tumor
N/A
448
Normal
N/A
328
Normal
N/A
571
Tumor
N/A
572
Normal
N/A
573
Tumor
N/A
574
Normal
N/A
695
Tumor
N/A
696
Normal
N/A
213
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
342
Normal
N/A
222
Normal
N/A
343
Tumor
N/A
344
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
