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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCBP1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
200.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
465.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
413.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
395.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
377.0
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
375.9
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
369.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
366.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
363.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
362.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
356.7
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
348.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
347.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
345.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
333.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
332.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
326.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
325.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
322.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
320.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
317.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
316.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
312.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
308.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
307.8
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
307.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
306.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
305.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
302.9
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
297.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
295.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
294.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
294.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
294.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
293.8
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
293.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
292.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
291.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
290.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
288.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
287.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
285.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
285.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
284.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
284.6
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
284.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
284.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
283.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
280.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
280.0
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
277.3
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
274.0
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
273.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
272.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
272.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
271.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
271.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
269.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
268.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
266.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
265.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
264.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
262.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
260.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
260.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
259.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
258.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
257.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
257.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
256.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
256.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
255.4
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
254.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
254.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
254.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
253.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
253.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
252.9
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
251.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
250.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
249.5
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
248.4
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
248.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
246.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
246.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
245.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
245.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
244.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
244.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
244.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
244.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
243.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
242.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
242.6
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
241.5
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
241.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
238.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
238.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
237.7
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
237.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
236.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
234.0
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
234.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
232.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
231.3
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
231.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
230.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
230.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
229.5
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
229.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
228.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
228.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
228.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
227.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
227.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
227.2
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
227.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
226.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
223.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
223.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
221.9
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
221.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
221.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
220.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
220.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
219.5
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
219.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
219.3
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
219.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
219.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
218.8
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
218.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
218.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
217.9
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
217.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
217.2
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
216.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
216.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
216.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
216.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
215.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
214.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
214.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
214.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
214.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
213.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
213.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
213.6
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
213.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
212.5
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
212.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
211.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
211.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
211.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
209.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
209.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
209.6
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
209.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
209.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
208.2
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
207.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
207.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
206.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
206.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
205.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
204.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
202.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
202.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
201.8
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
201.8
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
201.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
200.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
200.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
199.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
199.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
199.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
198.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
198.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
198.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
197.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
197.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
196.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
196.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
195.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
195.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
194.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
194.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
194.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
194.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
194.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
193.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
193.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
192.5
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
192.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
192.3
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
191.5
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
191.4
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
191.3
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
190.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
190.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
190.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
190.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
190.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
189.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
188.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
188.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
187.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
187.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
186.7
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
186.6
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
186.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
186.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
185.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
185.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
184.9
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
184.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
183.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
183.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
182.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
182.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
182.3
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
182.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
181.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
181.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
180.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
180.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
179.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
178.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
177.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
176.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
176.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
175.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
175.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
174.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
172.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
172.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
172.1
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
171.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
171.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
170.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
170.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
170.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
170.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
170.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
170.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
169.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
168.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
167.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
166.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
166.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
164.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
164.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
164.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
163.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
163.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
163.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
163.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
162.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
162.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
161.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
161.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
161.5
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
160.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
159.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
159.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
159.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
157.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
157.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
156.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
156.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
156.1
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
155.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
154.8
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
154.6
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
153.6
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
153.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
153.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
152.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
152.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
151.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
151.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
149.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
149.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
148.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
148.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
148.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
147.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
146.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
146.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
146.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
146.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
145.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
145.7
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
145.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
144.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
143.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
142.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
142.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
142.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
141.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
141.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
140.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
139.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
138.9
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
138.8
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
138.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
138.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
135.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
135.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
135.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
134.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
133.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
131.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
128.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
126.3
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
125.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
125.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
124.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
122.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
122.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
120.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
119.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
118.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
117.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
116.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
114.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
113.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
112.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
111.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
110.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
107.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
107.2
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
104.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
103.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
103.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
103.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
103.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
103.2
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
102.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
100.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
98.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
96.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
93.6
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
93.3
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
91.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
87.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
85.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
85.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
84.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
82.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
82.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
81.6
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
79.5
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
78.4
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
77.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
75.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
62.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
61.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
54.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
39.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
38.9
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
36.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCBP1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
181.6
Number of samples
231
Samples
Sample
Description
TPM
DO45131
0 years, male, NA, stage:4, dead, 360 days
357.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
336.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
315.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
309.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
299.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
295.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
292.9
DO23549
0 years, male, NA, stage:3, alive, 990 days
290.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
290.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
284.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
279.9
DO23526
0 years, male, NA, stage:3, alive, 1050 days
275.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
275.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
259.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
258.5
DO45267
0 years, male, NA, stage:3, dead, 570 days
256.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
255.8
DO48751
0 years, male, NA, stage:2, dead, 480 days
253.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
247.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
247.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
247.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
246.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
244.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
242.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
242.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
238.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
235.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
233.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
233.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
230.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
229.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
228.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
225.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
225.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
224.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
224.7
DO48730
0 years, female, NA, stage:2, alive, 630 days
224.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
224.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
224.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
223.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
223.2
DO45279
0 years, male, NA, stage:3, alive, 1290 days
223.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
222.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
221.9
DO45159
0 years, male, NA, stage:3, alive, 1470 days
219.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
216.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
216.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
215.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
215.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
215.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
215.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
213.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
213.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
213.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
213.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
212.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
209.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
208.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
208.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
208.4
DO45219
0 years, male, NA, stage:2, alive, 1080 days
207.8
DO48697
0 years, female, NA, stage:2, dead, 810 days
207.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
207.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
206.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
206.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
204.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
202.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
201.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
199.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
199.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
198.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
198.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
198.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
197.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
197.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
196.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
195.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
194.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
193.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
193.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
192.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
192.0
DO50850
0 years, male, NA, stage:3, alive, 720 days
191.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
191.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
188.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
187.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
187.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
187.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
187.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
186.2
DO50787
0 years, male, NA, stage:3, alive, 480 days
185.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
185.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
185.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
184.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
184.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
184.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
184.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
184.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
183.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
183.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
183.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
183.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
182.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
182.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
182.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
182.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
181.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
180.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
180.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
179.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
179.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
179.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
178.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
178.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
177.7
DO45203
0 years, female, NA, stage:2, alive, 1170 days
177.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
177.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
177.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
176.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
176.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
175.5
DO50776
0 years, male, NA, stage:1, alive, 690 days
174.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
174.5
DO45231
0 years, male, NA, stage:2, alive, 930 days
174.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
174.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
172.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
172.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
171.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
170.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
170.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
170.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
169.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
169.2
DO48695
0 years, male, NA, stage:2, alive, 720 days
168.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
168.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
167.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
167.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
166.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
166.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
165.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
165.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
164.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
164.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
163.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
163.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
163.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
162.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
162.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
161.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
161.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
161.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
161.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
161.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
161.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
161.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
160.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
160.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
159.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
158.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
158.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
157.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
156.9
DO50806
0 years, male, NA, stage:4, alive, 540 days
156.9
DO50855
0 years, male, NA, stage:2, alive, 570 days
155.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
155.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
154.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
154.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
153.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
152.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
151.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
151.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
151.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
150.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
149.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
147.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
146.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
145.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
145.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
145.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
144.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
144.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
144.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
143.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
142.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
141.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
141.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
140.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
140.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
139.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
138.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
138.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
137.1
DO23509
0 years, male, NA, stage:3, dead, 780 days
136.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
136.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
135.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
135.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
135.4
DO50816
0 years, male, NA, stage:2, alive, 390 days
135.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
133.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
133.2
DO45201
0 years, male, NA, stage:1, alive, 900 days
132.9
DO48741
0 years, male, NA, stage:3, alive, 240 days
132.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
130.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
130.4
DO23541
0 years, male, NA, stage:2, alive, 930 days
130.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
130.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
129.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
128.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
127.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
126.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
123.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
123.4
DO23517
0 years, male, NA, stage:2, alive, 1200 days
120.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
119.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
119.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
118.2
DO45285
0 years, male, NA, stage:3, alive, 480 days
114.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
113.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
113.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
112.8
DO23531
0 years, female, NA, stage:3, alive, 900 days
111.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
111.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
109.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
108.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
104.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
103.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
94.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
93.2
DO23511
0 years, female, NA, stage:3, dead, 180 days
81.9
DO50814
0 years, male, NA, stage:3, alive, 420 days
80.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
73.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
635
Tumor
0.5
367
Tumor
0.4
815
Tumor
0.4
357
Tumor
0.4
443
Tumor
0.4
385
Tumor
0.4
743
Tumor
0.4
413
Tumor
0.4
313
Tumor
0.4
227
Tumor
0.4
425
Tumor
0.3
557
Tumor
0.3
571
Tumor
0.3
161
Tumor
0.3
331
Tumor
0.3
567
Tumor
0.2
983
Tumor
0.2
427
Tumor
0.2
135
Tumor
0.2
715
Tumor
0.2
393
Tumor
0.2
877
Tumor
0.2
465
Tumor
0.2
383
Tumor
0.2
363
Tumor
0.2
131
Tumor
0.2
713
Tumor
0.2
267
Tumor
0.2
391
Tumor
0.2
813
Tumor
0.2
455
Tumor
0.2
617
Tumor
0.2
298
Normal
0.2
271
Tumor
0.2
257
Tumor
0.1
278
Normal
0.1
967
Tumor
0.1
112
Tumor
0.1
867
Tumor
0.1
925
Tumor
0.1
746
Normal
0.1
1027
Tumor
0.1
137
Tumor
0.1
113
Tumor
0.1
314
Normal
0.1
661
Tumor
0.1
452
Normal
0.1
446
Normal
0.1
727
Tumor
0.1
913
Tumor
0.1
537
Tumor
0.1
366
Normal
0.1
423
Tumor
0.1
951
Tumor
0.1
387
Tumor
0.1
881
Tumor
0.1
171
Tumor
0.1
421
Tumor
0.1
392
Normal
0.1
351
Tumor
0.1
445
Tumor
0.1
132
Normal
0.1
332
Normal
0.1
467
Tumor
0.1
222
Normal
0.1
365
Tumor
0.1
297
Tumor
0.1
456
Normal
0.1
312
Normal
0.1
563
Tumor
0.1
368
Normal
0.1
424
Normal
0.1
695
Tumor
0.1
1041
Tumor
0.1
523
Tumor
0.1
353
Tumor
0.1
814
Normal
0.1
444
Normal
0.1
671
Tumor
0.1
361
Tumor
0.1
422
Normal
0.1
428
Normal
0.1
141
Tumor
0.1
352
Normal
0.1
873
Tumor
0.1
436
Normal
0.1
362
Normal
0.1
136
Normal
0.1
384
Normal
0.1
744
Normal
0.1
138
Normal
0.1
777
Tumor
0.1
344
Normal
0.1
124
Normal
0.1
311
Tumor
0.1
737
Tumor
0.1
464
Normal
0.1
742
Normal
0.1
466
Normal
0.0
187
Tumor
0.0
914
Normal
0.0
627
Tumor
0.0
786
Normal
0.0
721
Tumor
0.0
185
Tumor
0.0
431
Tumor
0.0
714
Normal
0.0
186
Normal
0.0
461
Tumor
0.0
641
Tumor
0.0
527
Tumor
0.0
214
Normal
0.0
125
Tumor
0.0
148
Normal
0.0
955
Tumor
0.0
497
Tumor
0.0
778
Normal
0.0
433
Tumor
0.0
434
Normal
0.0
515
Tumor
0.0
388
Normal
0.0
414
Normal
0.0
738
Normal
0.0
471
Tumor
0.0
426
Normal
0.0
824
Normal
0.0
1016
Normal
0.0
432
Normal
0.0
451
Tumor
0.0
883
Tumor
0.0
354
Normal
0.0
196
Normal
0.0
468
Normal
0.0
376
Normal
0.0
493
Tumor
0.0
114
Normal
0.0
268
Normal
0.0
545
Tumor
0.0
975
Tumor
0.0
341
Tumor
0.0
146
Normal
0.0
921
Tumor
0.0
396
Normal
0.0
616
Normal
0.0
741
Tumor
0.0
463
Tumor
0.0
477
Tumor
0.0
188
Normal
0.0
145
Tumor
0.0
111
Normal
0.0
272
Normal
0.0
1045
Tumor
0.0
162
Normal
0.0
568
Normal
0.0
395
Tumor
0.0
615
Tumor
0.0
966
Normal
0.0
285
Tumor
0.0
286
Normal
0.0
128
Normal
0.0
127
Tumor
0.0
1021
Tumor
0.0
386
Normal
0.0
283
Tumor
0.0
628
Normal
0.0
642
Normal
0.0
911
Tumor
0.0
723
Tumor
0.0
878
Normal
0.0
342
Normal
0.0
716
Normal
0.0
142
Normal
0.0
862
Normal
0.0
533
Tumor
0.0
411
Tumor
0.0
755
Tumor
0.0
195
Tumor
0.0
858
Normal
0.0
358
Normal
0.0
884
Normal
0.0
172
Normal
0.0
618
Normal
0.0
375
Tumor
0.0
818
Normal
0.0
277
Tumor
0.0
262
Normal
0.0
976
Normal
0.0
435
Tumor
0.0
662
Normal
0.0
192
Normal
0.0
648
Normal
0.0
343
Tumor
0.0
817
Tumor
0.0
745
Tumor
-0.1
923
Tumor
-0.1
513
Tumor
-0.1
663
Tumor
-0.1
572
Normal
-0.1
1026
Normal
-0.1
1028
Normal
-0.1
816
Normal
-0.1
213
Tumor
-0.1
728
Normal
-0.1
823
Tumor
-0.1
982
Normal
-0.1
756
Normal
-0.1
912
Normal
-0.1
126
Normal
-0.1
394
Normal
-0.1
882
Normal
-0.1
952
Normal
-0.1
498
Normal
-0.1
258
Normal
-0.1
984
Normal
-0.1
968
Normal
-0.1
1015
Tumor
-0.1
447
Tumor
-0.1
696
Normal
-0.1
284
Normal
-0.1
685
Tumor
-0.1
686
Normal
-0.1
977
Tumor
-0.1
356
Normal
-0.1
866
Normal
-0.1
574
Normal
-0.1
868
Normal
-0.1
518
Normal
-0.1
218
Normal
-0.1
228
Normal
-0.1
918
Normal
-0.1
412
Normal
-0.1
191
Tumor
-0.1
416
Normal
-0.1
474
Normal
-0.1
487
Tumor
-0.1
1025
Tumor
-0.1
217
Tumor
-0.1
978
Normal
-0.1
874
Normal
-0.1
232
Normal
-0.1
664
Normal
-0.1
488
Normal
-0.1
1043
Tumor
-0.1
954
Normal
-0.1
937
Tumor
-0.1
224
Normal
-0.1
462
Normal
-0.1
864
Normal
-0.1
525
Tumor
-0.1
722
Normal
-0.1
327
Tumor
-0.1
981
Tumor
-0.1
484
Normal
-0.1
852
Normal
-0.1
666
Normal
-0.1
964
Normal
-0.1
517
Tumor
-0.1
1022
Normal
-0.1
938
Normal
-0.1
231
Tumor
-0.1
1031
Tumor
-0.1
944
Normal
-0.1
123
Tumor
-0.1
538
Normal
-0.1
915
Tumor
-0.1
1014
Normal
-0.1
724
Normal
-0.1
1032
Normal
-0.1
636
Normal
-0.1
956
Normal
-0.1
922
Normal
-0.1
472
Normal
-0.1
558
Normal
-0.1
328
Normal
-0.1
926
Normal
-0.1
415
Tumor
-0.1
924
Normal
-0.1
851
Tumor
-0.1
221
Tumor
-0.1
223
Tumor
-0.1
573
Tumor
-0.1
953
Tumor
-0.1
261
Tumor
-0.1
785
Tumor
-0.1
481
Tumor
-0.2
364
Normal
-0.2
211
Tumor
-0.2
965
Tumor
-0.2
478
Normal
-0.2
482
Normal
-0.2
494
Normal
-0.2
212
Normal
-0.2
1042
Normal
-0.2
1046
Normal
-0.2
647
Tumor
-0.2
698
Normal
-0.2
535
Tumor
-0.2
483
Tumor
-0.2
448
Normal
-0.2
528
Normal
-0.2
546
Normal
-0.2
665
Tumor
-0.2
857
Tumor
-0.2
916
Normal
-0.2
863
Tumor
-0.2
958
Normal
-0.2
553
Tumor
-0.2
943
Tumor
-0.2
564
Normal
-0.2
534
Normal
-0.2
492
Normal
-0.2
861
Tumor
-0.2
1044
Normal
-0.2
516
Normal
-0.2
491
Tumor
-0.2
526
Normal
-0.2
963
Tumor
-0.2
554
Normal
-0.2
697
Tumor
-0.2
355
Tumor
-0.3
524
Normal
-0.3
514
Normal
-0.3
672
Normal
-0.3
536
Normal
-0.3
957
Tumor
-0.3
917
Tumor
-0.3
147
Tumor
-0.3
1013
Tumor
-0.4
865
Tumor
-0.4
473
Tumor
-0.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.