HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:3.8 nTPM
HPA Brain:14.7 nTPM
GTEx:3.8 nTPM
FANTOM5:31.3 Scaled Tags Per Million
Pig:11.5 nTPM
Mouse:6.7 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 14.7
Sample id Sample description nTPM
Hippocampus
nTPM: 13.9
1855 Male, age 76, left hemisphere 16.0
1898 Male, age 80, left hemisphere 15.0
1911 Female, age 85, right hemisphere 14.8
2148 Female, age 91, left hemisphere 13.8
2621 Female, age 67, right hemisphere 12.0
2529 Female, age 94, left hemisphere 11.8
Dentate gyrus
nTPM: 14.4
2531 Female, age 67, both hemispheres 17.1
2528 Male, age 74, both hemispheres 15.6
1927 Female, age 91, both hemispheres 14.8
2246 Female, age 85, both hemispheres 14.0
2010 Male, age 76, both hemispheres 13.1
2530 Female, age 94, left hemisphere 11.9
Entorhinal gyrus
nTPM: 12.4
2117 Female, age 91, right hemisphere 13.4
1787 Male, age 76, left hemisphere 13.2
1938 Female, age 85, left hemisphere 12.7
2686 Male, age 75, right hemisphere 12.5
2613 Female, age 94, left hemisphere 11.5
2764 Male, age 80, right hemisphere 11.4
Hippocampus, CA1
nTPM: 14.7
2045 Male, age 76, both hemispheres 19.5
1873 Female, age 85, both hemispheres 16.0
2527 Male, age 74, both hemispheres 13.6
2082 Female, age 91, right hemisphere 12.3
2749 Male, age 80, left hemisphere 12.0
Hippocampus, CA2
nTPM: 13.5
1892 Male, age 76, both hemispheres 14.6
2249 Male, age 74, both hemispheres 14.6
1940 Female, age 85, left hemisphere 13.2
2437 Female, age 94, left hemisphere 13.1
2113 Female, age 91, right hemisphere 12.9
1963 Male, age 80, left hemisphere 12.6
Hippocampus, CA3
nTPM: 13.7
2620 Female, age 94, left hemisphere 15.2
2861 Female, age 67, both hemispheres 15.2
1867 Male, age 76, both hemispheres 14.0
2436 Male, age 74, both hemispheres 13.1
1891 Female, age 85, both hemispheres 12.9
2137 Male, age 80, left hemisphere 12.0
Parahippocampal cortex
nTPM: 13.1
2532 Female, age 72, left hemisphere 15.1
2693 Female, age 94, both hemispheres 14.8
1933 Female, age 85, both hemispheres 13.7
2245 Female, age 91, both hemispheres 13.6
2692 Male, age 74, both hemispheres 13.6
1990 Female, age 91, right hemisphere 13.5
1850 Male, age 80, both hemispheres 12.5
2250 Female, age 67, right hemisphere 12.2
2018 Male, age 76, both hemispheres 11.5
2622 Female, age 67, right hemisphere 10.9
Perirhinal gyrus
nTPM: 14.6
2521 Female, age 94, right hemisphere 15.7
1794 Male, age 80, right hemisphere 14.8
1847 Female, age 91, left hemisphere 14.8
1841 Female, age 85, right hemisphere 14.1
2848 Male, age 76, right hemisphere 13.9
Subiculum
nTPM: 12.5
2729 Female, age 91, right hemisphere 16.1
1977 Female, age 85, both hemispheres 13.4
1901 Male, age 80, both hemispheres 12.4
2619 Male, age 74, both hemispheres 11.4
2042 Male, age 76, both hemispheres 11.0
2438 Female, age 94, left hemisphere 10.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 3.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.8
Samples: 197

Max nTPM: 7.7
Min nTPM: 1.8
Std nTPM: 1.1
Median nTPM: 3.6
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 7.7
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 7.5
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 7.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 7.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 6.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 6.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 6.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 6.3
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 6.2
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 6.2
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 6.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 31.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.3
FF:10169-103B7 60 years, female 36.3
FF:10153-102I9 76 years, female 26.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 11.5
Pig sample Sample description nTPM
Subiculum
nTPM: 10.9
Samples: 4

Max nTPM: 13.0
Min nTPM: 7.9
Sample A Female 7.9
Sample B Female 11.6
Sample C Male 11.2
Sample D Male 13.0
Dorsal hippocampus
nTPM: 11.5
Samples: 4

Max nTPM: 14.6
Min nTPM: 9.7
Sample A Female 10.1
Sample B Female 11.7
Sample C Male 9.7
Sample D Male 14.6
Entorhinal cortex
nTPM: 10.7
Samples: 4

Max nTPM: 12.3
Min nTPM: 8.9
Sample A Female 8.9
Sample B Female 9.6
Sample C Male 12.0
Sample D Male 12.3
Ventral hippocampus
nTPM: 11.0
Samples: 4

Max nTPM: 13.0
Min nTPM: 8.3
Sample A Female 12.1
Sample B Female 13.0
Sample C Male 8.3
Sample D Male 10.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 6.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.4
Samples: 4

Max nTPM: 6.2
Min nTPM: 4.7
Sample A Male 5.5
Sample B Male 5.1
Sample C Female 6.2
Sample D Female 4.7
Hippocampal formation
nTPM: 6.7
Samples: 4

Max nTPM: 7.9
Min nTPM: 6.0
Sample A Male 6.4
Sample B Male 7.9
Sample C Female 6.5
Sample D Female 6.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69352762 Antisense, RP_050412_01_B03, Mouse strain C57BL/6J (56 days, male) 0.1

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