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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
72.3
nTPM
GTEx:
72.3
nTPM
FANTOM5:
0.0
Scaled Tags Per Million
Pig:
18.7
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
72.3
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 72.3
Samples: 105
Max nTPM: 203.0
Min nTPM: 0.7
Std nTPM: 42.9
Median nTPM:
384_1
83 years, male
203.0
265_1
87 years, male
180.3
32_1
67 years, male
167.5
405_1
91 years, male
167.1
389_1
86 years, female
160.1
246_1
77 years, male
151.8
81_1
67 years, male
146.3
324_1
76 years, male
142.4
526_1
61 years, male
137.5
311_1
78 years, male
128.8
495_1
57 years, female
126.4
189_1
76 years, male
126.3
415_1
77 years, female
125.7
217_1
76 years, male
124.2
286_1
68 years, female
124.1
153_1
70 years, female
123.0
316_1
62 years, male
119.8
35_1
74 years, female
119.7
126_1
63 years, male
119.6
376_1
75 years, female
115.1
490_1
67 years, female
114.4
229_1
69 years, female
114.2
517_1
88 years, male
113.9
347_1
72 years, male
110.2
292_1
71 years, male
105.7
321_1
62 years, female
102.6
499_1
55 years, female
101.9
349_1
83 years, male
101.0
377_1
82 years, female
99.1
348_1
84 years, male
99.0
18_1
88 years, male
98.2
413_1
59 years, female
98.1
163_1
78 years, male
94.5
352_1
62 years, male
93.4
322_1
76 years, male
91.6
43_1
64 years, female
85.5
42_1
85 years, male
83.4
149_1
88 years, male
80.6
142_1
61 years, female
79.8
89_1
63 years, male
76.8
145_1
84 years, male
72.4
503_1
68 years, male
71.7
320_1
89 years, female
70.5
356_1
87 years, female
69.7
307_1
66 years, female
67.2
379_1
60 years, male
66.9
396_1
62 years, male
66.9
291_1
76 years, male
66.8
115_1
83 years, male
66.2
17_1
71 years, male
65.0
315_1
62 years, female
64.6
2_1
77 years, female
61.9
9_1
66 years, female
61.9
266_1
85 years, male
61.2
319_1
81 years, male
61.1
335_1
73 years, female
58.6
293_1
68 years, female
57.5
501_1
88 years, male
56.1
237_1
82 years, male
55.7
172_1
72 years, female
55.2
4_1
88 years, female
54.1
353_1
82 years, female
53.5
506_1
65 years, male
52.3
350_1
84 years, female
52.1
447_1
81 years, male
51.5
6_1
73 years, female
51.4
313_1
79 years, female
49.9
394_1
75 years, female
49.7
314_1
67 years, male
49.4
218_1
71 years, female
48.6
254_1
77 years, female
47.9
264_1
73 years, female
47.3
308_1
70 years, female
45.0
351_1
91 years, male
44.5
386_1
76 years, male
43.5
414_1
84 years, female
41.8
425_1
59 years, female
40.6
452_1
88 years, female
40.6
251_1
78 years, male
40.4
355_1
70 years, female
40.2
137_1
83 years, male
40.0
318_1
68 years, male
39.7
117_1
61 years, male
39.2
468_1
89 years, male
38.0
173_1
67 years, male
35.6
139_1
64 years, female
35.0
295_1
61 years, female
33.8
288_1
66 years, female
31.6
404_1
82 years, female
30.9
109_1
81 years, female
30.1
162_1
79 years, female
29.8
119_1
70 years, female
26.1
177_1
74 years, male
25.9
518_1
75 years, female
23.1
99_1
64 years, male
22.3
120_1
70 years, female
21.5
317_1
60 years, male
20.5
243_1
75 years, male
19.9
354_1
81 years, female
18.1
375_1
74 years, female
17.3
41_1
94 years, female
17.2
491_1
89 years, female
15.3
466_1
57 years, female
3.3
406_1
79 years, male
3.2
480_1
63 years, male
0.7
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
