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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
83.6
nTPM
HPA Brain:
36.4
nTPM
GTEx:
83.6
nTPM
FANTOM5:
37.6
Scaled Tags Per Million
Pig:
15.9
nTPM
Mouse:
35.9
nTPM
Allen mouse:
16.3
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
36.4
Sample id
Sample description
nTPM
Amygdala nTPM: 36.4
2814
Male, age 76, right hemisphere
41.9
2695
Female, age 67, right hemisphere
41.0
2514
Male, age 75, right hemisphere
35.1
2517
Female, age 94, left hemisphere
32.2
1987
Female, age 91, left hemisphere
32.0
Basal amygdala nTPM: 33.1
2609
Male, age 75, right hemisphere
44.5
2110
Male, age 80, left hemisphere
33.9
2827
Female, age 67, right hemisphere
32.7
2685
Female, age 94, left hemisphere
29.5
2243
Female, age 91, right hemisphere
29.4
1955
Male, age 76, both hemispheres
28.8
Central amygdala nTPM: 35.6
2826
Female, age 94, left hemisphere
43.9
2515
Male, age 75, right hemisphere
43.1
1905
Male, age 76, both hemispheres
38.4
2239
Male, age 80, left hemisphere
27.0
2701
Female, age 91, right hemisphere
25.5
Corticomedial amygdala nTPM: 30.9
2428
Male, age 75, right hemisphere
39.9
2829
Male, age 80, left hemisphere
37.0
2429
Female, age 94, left hemisphere
28.6
2242
Female, age 91, right hemisphere
27.4
2240
Male, age 76, both hemispheres
27.0
2535
Female, age 67, right hemisphere
25.3
Lateral amygdala nTPM: 33.5
2534
Female, age 94, left hemisphere
40.1
1883
Male, age 76, both hemispheres
37.3
2516
Male, age 75, right hemisphere
36.9
2830
Female, age 67, right hemisphere
31.4
2256
Male, age 80, left hemisphere
29.2
2255
Female, age 91, right hemisphere
26.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
83.6
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 83.6
Samples: 152
Max nTPM: 183.1
Min nTPM: 41.9
Std nTPM: 19.7
Median nTPM: 80.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
183.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
150.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
139.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
136.1
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
132.9
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
129.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
123.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
121.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
120.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
115.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
113.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
111.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
110.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
110.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
108.2
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
107.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
105.2
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
104.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
104.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
103.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
103.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
103.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
101.1
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
99.3
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
98.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
96.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
96.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
96.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
95.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
95.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
95.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
94.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
93.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
93.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
93.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
92.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
92.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
92.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
92.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
91.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
91.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
91.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
89.9
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
89.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
89.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
88.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
88.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
87.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
87.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
86.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
86.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
86.6
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
85.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
85.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
84.4
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
84.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
83.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
83.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
83.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
83.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
83.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
83.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
83.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
83.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
83.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
83.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
83.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
82.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
82.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
82.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
81.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
81.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
81.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
81.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
80.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
80.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
80.5
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
80.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
79.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
79.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
79.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
79.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
79.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
79.5
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
79.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
79.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
78.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
78.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
78.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
78.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
77.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
77.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
76.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
76.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
76.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
75.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
75.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
75.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
74.7
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
74.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
73.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
73.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
73.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
73.1
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
73.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
73.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
72.9
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
72.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
72.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
71.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
71.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
71.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
71.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
70.8
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
70.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
70.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
70.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
69.9
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
69.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
69.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
69.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
69.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
68.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
68.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
68.7
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
68.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
67.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
67.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
66.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
65.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
64.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
64.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
64.6
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
64.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
64.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
64.0
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
63.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
63.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
62.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
61.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
61.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
60.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
60.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
60.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
60.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
60.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
58.7
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
58.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
56.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
53.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
46.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
41.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
35.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 35.9
Samples: 4
Max nTPM: 38.9
Min nTPM: 34.3
Sample A
Male
34.3
Sample B
Male
35.5
Sample C
Female
38.9
Sample D
Female
34.8
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.