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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UBE2V2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.9
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
98.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
87.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
84.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
80.4
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
77.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
77.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
75.8
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
73.2
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
71.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
71.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
66.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
65.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
65.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
63.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
62.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
60.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
60.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
60.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
60.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
59.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
59.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
58.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
56.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
56.5
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
56.4
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
56.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
55.8
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
55.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
55.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
55.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
53.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
53.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
52.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
52.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
52.4
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
52.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
51.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
51.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
50.2
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
49.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
49.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
49.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
49.2
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
48.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
47.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
46.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
46.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
46.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
46.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
45.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
45.6
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
45.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
45.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
44.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
44.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
44.5
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
44.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
43.6
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
43.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
43.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
42.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
42.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
42.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
41.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
41.8
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
41.7
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
41.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
41.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
41.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
41.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
41.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
40.8
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
40.7
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
40.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
40.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
40.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
39.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
39.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
39.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
39.5
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
39.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
39.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
39.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
39.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
39.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
38.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
38.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
38.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
38.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
38.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
38.0
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
37.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
37.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
37.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
37.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
37.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
37.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
37.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
37.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
37.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
37.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
36.8
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
36.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
36.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
36.3
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
36.2
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
36.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
36.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
35.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
35.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
35.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
35.6
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
35.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
35.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
35.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
35.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
34.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
34.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
34.6
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
34.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
34.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
33.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
33.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
33.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
33.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
33.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
33.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
33.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
33.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
33.0
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
32.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
32.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
32.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
32.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
32.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
32.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
32.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
31.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
31.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
31.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
31.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
31.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
31.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
31.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
30.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
30.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
30.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
30.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
29.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
29.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
29.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
29.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
29.6
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
29.5
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
29.3
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
29.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
29.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
29.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
29.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
29.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
28.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
28.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
28.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
28.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
28.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
28.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
28.5
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
28.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
28.4
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
28.2
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
28.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
28.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
28.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
27.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
27.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
27.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
27.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
27.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
27.6
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
27.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
27.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
27.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
26.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
26.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
26.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
26.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
26.7
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
26.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
26.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
26.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
26.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
26.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
26.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
26.2
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
26.1
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
26.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
26.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
26.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
26.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
25.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
25.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
25.9
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
25.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
25.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
25.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
25.6
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
25.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
25.5
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
25.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
25.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
25.3
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
25.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
25.0
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
25.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
24.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
24.9
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
24.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
24.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
24.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
24.5
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
24.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
24.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
24.5
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
24.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
24.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
24.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
24.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
24.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
24.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
23.9
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
23.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
23.8
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
23.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
23.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
23.8
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
23.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
23.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
23.7
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
23.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
23.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
23.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
23.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
23.3
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
23.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
23.3
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
23.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
23.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
23.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
23.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
23.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
23.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
22.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
22.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
22.7
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
22.7
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
22.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
22.7
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
22.7
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
22.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
22.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
22.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
22.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
22.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
22.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
22.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
22.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
22.0
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
21.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
21.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
21.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
21.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
21.3
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
21.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
21.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
21.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
21.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
21.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
20.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
20.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
20.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
20.6
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
20.5
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
20.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
20.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
20.2
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
20.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
19.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
19.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
19.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
19.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
19.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
19.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
19.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
19.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
19.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
19.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
19.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
19.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
19.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
19.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
18.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
18.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
18.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
18.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
18.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
18.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
18.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
18.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
18.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
17.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
17.9
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
17.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
17.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
17.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
17.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
17.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
17.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
17.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
17.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
16.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
16.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
16.2
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
16.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
16.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
15.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
15.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
15.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
15.1
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
15.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
15.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
15.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
14.9
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
14.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
14.6
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
14.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
14.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
14.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
14.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
14.1
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
14.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
13.9
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
13.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
13.4
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
13.2
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
12.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
11.7
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
11.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
11.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
10.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
10.3
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
9.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
9.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
9.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
9.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
8.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
8.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
8.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
7.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
7.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
7.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UBE2V2 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.0
Number of samples
231
Samples
Sample
Description
TPM
DO48672
0 years, male, NA, stage:2, alive, 450 days
131.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
113.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
99.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
93.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
90.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
85.8
DO50806
0 years, male, NA, stage:4, alive, 540 days
85.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
83.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
82.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
79.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
77.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
76.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
76.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
73.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
72.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
72.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
71.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
68.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
67.3
DO45221
0 years, female, NA, stage:4, dead, 390 days
65.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
65.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
64.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
60.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
59.8
DO45163
0 years, male, NA, stage:2, alive, 960 days
58.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
57.8
DO45257
0 years, male, NA, stage:3, alive, 810 days
56.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
56.3
DO50798
0 years, male, NA, stage:3, dead, 30 days
55.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
54.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
53.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
53.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
53.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
52.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
52.4
DO48697
0 years, female, NA, stage:2, dead, 810 days
50.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
49.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
49.3
DO45265
0 years, male, NA, stage:3, alive, 1020 days
48.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
48.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
47.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
47.1
DO23542
0 years, male, NA, stage:3, alive, 960 days
46.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
45.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
45.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
44.8
DO23509
0 years, male, NA, stage:3, dead, 780 days
44.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
43.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
42.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
42.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
42.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
41.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
40.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
40.8
DO48725
0 years, male, NA, stage:1, alive, 780 days
40.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
40.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
40.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
40.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
40.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
39.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
39.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
38.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
38.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
38.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
37.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
36.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
36.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
36.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
36.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
36.0
DO45203
0 years, female, NA, stage:2, alive, 1170 days
35.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
35.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
35.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
34.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
34.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
34.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
34.3
DO45135
0 years, male, NA, stage:1, alive, 1410 days
33.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
33.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
33.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
33.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
32.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
32.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
32.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
32.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
31.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
31.8
DO50825
0 years, male, NA, stage:2, alive, 390 days
31.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
31.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
31.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
31.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
31.2
DO45199
0 years, female, NA, stage:2, alive, 1350 days
30.7
DO45253
0 years, male, NA, stage:2, alive, 870 days
30.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
30.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
30.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
30.2
DO23514
0 years, male, NA, stage:2, alive, 1290 days
30.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
30.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
29.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
29.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
29.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
29.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
29.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
29.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
29.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
29.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
29.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
29.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
29.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
28.9
DO50832
0 years, male, NA, stage:3, alive, 90 days
28.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
28.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
28.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
28.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
28.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
28.5
DO45123
0 years, female, NA, stage:2, dead, 570 days
28.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
28.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
28.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
27.9
DO45137
0 years, male, NA, stage:1, alive, 1320 days
27.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
27.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
27.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
27.1
DO45129
0 years, male, NA, stage:3, alive, 1470 days
27.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
26.8
DO45177
0 years, female, NA, stage:3, alive, 1260 days
26.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
26.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
26.5
DO45239
0 years, male, NA, stage:2, alive, 870 days
26.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
26.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
26.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
25.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
25.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
25.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
25.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
25.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
25.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
25.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
25.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
25.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
25.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
25.1
DO45115
0 years, male, NA, stage:2, alive, 840 days
24.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
24.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
24.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
24.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
24.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
23.8
DO48743
0 years, female, NA, stage:2, alive, 570 days
23.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
23.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
23.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
23.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
23.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
23.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
23.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
23.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
23.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
23.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
23.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
23.0
DO45197
0 years, male, NA, stage:2, alive, 1170 days
22.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
22.9
DO45175
0 years, male, NA, stage:2, alive, 1140 days
22.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
22.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
22.4
DO45287
0 years, male, NA, stage:1, alive, 390 days
22.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
22.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
22.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
22.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
21.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
21.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
21.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
21.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
21.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
21.4
DO50774
0 years, female, NA, stage:2, alive, 720 days
21.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
21.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
20.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
20.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
20.8
DO23530
0 years, male, NA, stage:4, dead, 180 days
20.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
20.6
DO23549
0 years, male, NA, stage:3, alive, 990 days
20.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
20.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
20.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
20.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
20.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
19.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
19.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
19.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
19.8
DO50803
0 years, female, NA, stage:1, alive, 540 days
19.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
19.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
19.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
19.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
18.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
18.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
17.9
DO50814
0 years, male, NA, stage:3, alive, 420 days
17.7
DO45167
0 years, male, NA, stage:2, dead, 1440 days
17.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
17.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
17.6
DO45189
0 years, female, NA, stage:2, alive, 1200 days
17.4
DO50818
0 years, male, NA, stage:2, alive, 510 days
17.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
17.3
DO48742
0 years, male, NA, stage:2, alive, 600 days
17.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
17.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
17.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
16.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
16.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
15.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
15.7
DO23517
0 years, male, NA, stage:2, alive, 1200 days
15.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
15.3
DO48674
0 years, male, NA, stage:2, alive, 1260 days
15.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
15.2
DO45245
0 years, female, NA, stage:2, dead, 240 days
15.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
15.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
15.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
15.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
14.9
DO50783
0 years, male, NA, stage:3, alive, 480 days
14.0
DO50807
0 years, male, NA, stage:1, alive, 540 days
13.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
13.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
12.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
12.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
12.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
11.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
11.2
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
745
Tumor
0.6
1013
Tumor
0.5
1025
Tumor
0.5
285
Tumor
0.5
537
Tumor
0.4
517
Tumor
0.4
331
Tumor
0.4
715
Tumor
0.4
231
Tumor
0.4
147
Tumor
0.3
727
Tumor
0.3
546
Normal
0.3
481
Tumor
0.3
497
Tumor
0.3
112
Tumor
0.3
332
Normal
0.3
937
Tumor
0.3
1027
Tumor
0.3
123
Tumor
0.3
528
Normal
0.3
714
Normal
0.3
482
Normal
0.3
298
Normal
0.3
128
Normal
0.3
258
Normal
0.3
952
Normal
0.3
257
Tumor
0.3
534
Normal
0.3
113
Tumor
0.3
465
Tumor
0.3
191
Tumor
0.3
484
Normal
0.2
472
Normal
0.2
818
Normal
0.2
262
Normal
0.2
958
Normal
0.2
641
Tumor
0.2
785
Tumor
0.2
523
Tumor
0.2
358
Normal
0.2
435
Tumor
0.2
951
Tumor
0.2
513
Tumor
0.2
376
Normal
0.2
272
Normal
0.2
567
Tumor
0.2
884
Normal
0.2
1042
Normal
0.2
327
Tumor
0.2
131
Tumor
0.2
221
Tumor
0.2
392
Normal
0.2
423
Tumor
0.2
716
Normal
0.2
278
Normal
0.2
944
Normal
0.2
867
Tumor
0.2
127
Tumor
0.2
394
Normal
0.2
553
Tumor
0.2
696
Normal
0.2
353
Tumor
0.2
912
Normal
0.2
277
Tumor
0.2
866
Normal
0.2
964
Normal
0.2
864
Normal
0.2
462
Normal
0.2
1046
Normal
0.2
396
Normal
0.2
425
Tumor
0.2
436
Normal
0.2
314
Normal
0.2
723
Tumor
0.2
432
Normal
0.2
1043
Tumor
0.2
111
Normal
0.2
328
Normal
0.2
488
Normal
0.2
268
Normal
0.2
858
Normal
0.2
186
Normal
0.2
926
Normal
0.2
882
Normal
0.2
756
Normal
0.2
172
Normal
0.2
313
Tumor
0.2
232
Normal
0.2
196
Normal
0.2
342
Normal
0.2
1026
Normal
0.2
388
Normal
0.2
363
Tumor
0.2
824
Normal
0.2
863
Tumor
0.2
478
Normal
0.2
212
Normal
0.2
354
Normal
0.2
421
Tumor
0.2
663
Tumor
0.1
446
Normal
0.1
361
Tumor
0.1
943
Tumor
0.1
982
Normal
0.1
1014
Normal
0.1
851
Tumor
0.1
222
Normal
0.1
217
Tumor
0.1
722
Normal
0.1
648
Normal
0.1
473
Tumor
0.1
955
Tumor
0.1
137
Tumor
0.1
463
Tumor
0.1
312
Normal
0.1
368
Normal
0.1
862
Normal
0.1
466
Normal
0.1
148
Normal
0.1
1022
Normal
0.1
132
Normal
0.1
514
Normal
0.1
516
Normal
0.1
162
Normal
0.1
428
Normal
0.1
422
Normal
0.1
558
Normal
0.1
136
Normal
0.1
125
Tumor
0.1
364
Normal
0.1
411
Tumor
0.1
464
Normal
0.1
414
Normal
0.1
192
Normal
0.1
557
Tumor
0.1
1032
Normal
0.1
367
Tumor
0.1
664
Normal
0.1
921
Tumor
0.1
635
Tumor
0.1
1016
Normal
0.1
984
Normal
0.1
978
Normal
0.1
444
Normal
0.1
877
Tumor
0.1
572
Normal
0.1
471
Tumor
0.1
924
Normal
0.1
515
Tumor
0.1
261
Tumor
0.1
424
Normal
0.1
698
Normal
0.1
738
Normal
0.1
415
Tumor
0.1
195
Tumor
0.1
494
Normal
0.1
341
Tumor
0.1
965
Tumor
0.1
386
Normal
0.1
228
Normal
0.1
868
Normal
0.1
518
Normal
0.1
571
Tumor
0.1
385
Tumor
0.1
925
Tumor
0.1
138
Normal
0.1
938
Normal
0.1
126
Normal
0.1
448
Normal
0.1
366
Normal
0.1
498
Normal
0.1
666
Normal
0.1
568
Normal
0.1
352
Normal
0.1
214
Normal
0.1
218
Normal
0.1
922
Normal
0.1
686
Normal
0.1
742
Normal
0.0
356
Normal
0.0
443
Tumor
0.0
434
Normal
0.0
983
Tumor
0.0
344
Normal
0.0
918
Normal
0.0
271
Tumor
0.0
283
Tumor
0.0
526
Normal
0.0
142
Normal
0.0
286
Normal
0.0
391
Tumor
0.0
146
Normal
0.0
954
Normal
0.0
145
Tumor
0.0
416
Normal
0.0
124
Normal
0.0
724
Normal
0.0
492
Normal
0.0
224
Normal
0.0
375
Tumor
0.0
451
Tumor
0.0
284
Normal
0.0
141
Tumor
0.0
916
Normal
0.0
564
Normal
0.0
474
Normal
0.0
662
Normal
0.0
823
Tumor
0.0
956
Normal
0.0
477
Tumor
0.0
365
Tumor
0.0
721
Tumor
0.0
456
Normal
0.0
713
Tumor
0.0
874
Normal
0.0
737
Tumor
0.0
114
Normal
0.0
852
Normal
0.0
1031
Tumor
0.0
616
Normal
0.0
966
Normal
0.0
213
Tumor
0.0
362
Normal
0.0
861
Tumor
0.0
728
Normal
0.0
977
Tumor
0.0
452
Normal
0.0
431
Tumor
0.0
187
Tumor
0.0
412
Normal
0.0
574
Normal
0.0
617
Tumor
0.0
968
Normal
0.0
433
Tumor
0.0
527
Tumor
0.0
351
Tumor
0.0
387
Tumor
0.0
393
Tumor
0.0
524
Normal
0.0
914
Normal
0.0
743
Tumor
0.0
468
Normal
0.0
917
Tumor
0.0
1044
Normal
0.0
355
Tumor
0.0
538
Normal
0.0
615
Tumor
0.0
554
Normal
0.0
976
Normal
0.0
426
Normal
0.0
957
Tumor
0.0
536
Normal
-0.1
741
Tumor
-0.1
786
Normal
-0.1
873
Tumor
-0.1
487
Tumor
-0.1
816
Normal
-0.1
695
Tumor
-0.1
384
Normal
-0.1
1045
Tumor
-0.1
981
Tumor
-0.1
671
Tumor
-0.1
881
Tumor
-0.1
878
Normal
-0.1
483
Tumor
-0.1
618
Normal
-0.1
563
Tumor
-0.1
1028
Normal
-0.1
746
Normal
-0.1
628
Normal
-0.1
1021
Tumor
-0.1
685
Tumor
-0.1
697
Tumor
-0.1
915
Tumor
-0.1
778
Normal
-0.1
642
Normal
-0.1
883
Tumor
-0.1
493
Tumor
-0.1
672
Normal
-0.1
161
Tumor
-0.1
913
Tumor
-0.1
188
Normal
-0.1
227
Tumor
-0.1
911
Tumor
-0.1
1041
Tumor
-0.1
627
Tumor
-0.1
665
Tumor
-0.1
545
Tumor
-0.1
857
Tumor
-0.1
865
Tumor
-0.2
535
Tumor
-0.2
427
Tumor
-0.2
171
Tumor
-0.2
967
Tumor
-0.2
525
Tumor
-0.2
185
Tumor
-0.2
297
Tumor
-0.2
744
Normal
-0.2
455
Tumor
-0.2
636
Normal
-0.2
467
Tumor
-0.2
461
Tumor
-0.2
383
Tumor
-0.2
267
Tumor
-0.2
1015
Tumor
-0.2
447
Tumor
-0.2
135
Tumor
-0.2
817
Tumor
-0.2
963
Tumor
-0.2
211
Tumor
-0.2
343
Tumor
-0.2
647
Tumor
-0.2
533
Tumor
-0.3
975
Tumor
-0.3
311
Tumor
-0.3
923
Tumor
-0.3
445
Tumor
-0.3
814
Normal
-0.3
491
Tumor
-0.3
413
Tumor
-0.3
223
Tumor
-0.3
953
Tumor
-0.3
815
Tumor
-0.3
777
Tumor
-0.4
661
Tumor
-0.4
813
Tumor
-0.4
573
Tumor
-0.4
357
Tumor
-0.4
755
Tumor
-0.5
395
Tumor
-0.5
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.