We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HNRNPH1 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
69.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
245.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
214.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
208.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
191.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
190.1
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
186.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
177.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
176.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
171.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
168.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
168.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
165.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
164.9
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
163.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
162.3
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
154.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
152.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
151.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
149.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
148.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
147.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
140.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
137.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
135.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
134.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
134.5
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
133.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
133.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
132.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
132.0
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
131.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
128.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
128.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
128.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
127.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
127.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
126.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
124.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
122.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
118.2
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
117.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
115.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
115.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
114.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
114.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
113.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
113.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
113.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
112.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
111.7
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
111.2
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
110.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
110.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
109.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
108.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
108.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
108.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
107.9
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
106.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
105.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
105.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
105.7
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
103.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
103.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
103.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
102.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
102.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
102.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
102.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
101.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
100.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
100.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
100.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
98.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
97.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
97.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
97.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
97.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
96.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
94.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
94.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
93.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
93.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
93.4
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
91.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
91.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
91.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
91.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
90.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
90.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
89.4
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
89.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
88.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
88.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
87.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
87.4
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
87.3
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
87.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
87.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
86.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
86.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
85.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
85.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
84.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
83.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
83.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
82.1
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
82.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
81.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
80.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
78.9
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
78.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
78.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
78.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
78.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
78.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
78.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
77.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
77.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
77.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
77.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
77.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
77.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
77.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
76.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
76.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
75.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
74.8
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
74.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
73.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
73.8
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
73.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
73.3
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
73.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
72.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
72.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
72.2
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
72.2
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
72.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
71.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
71.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
71.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
71.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
71.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
71.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
70.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
70.3
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
69.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
69.2
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
69.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
69.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
68.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
67.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
67.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
66.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
66.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
66.5
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
66.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
66.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
65.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
65.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
64.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
63.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
63.7
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
63.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
63.4
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
63.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
63.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
62.9
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
62.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
62.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
62.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
62.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
61.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
61.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
60.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
60.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
60.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
60.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
59.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
59.8
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
59.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
59.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
59.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
59.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
59.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
59.1
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
58.4
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
58.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
57.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
57.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
57.4
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
56.9
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
56.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
56.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
56.4
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
56.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
56.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
56.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
56.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
55.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
55.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
55.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
55.1
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
54.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
54.3
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
54.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
54.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
53.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
52.9
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
52.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
52.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
52.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
52.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
52.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
52.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
52.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
52.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
51.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
51.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
51.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
51.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
50.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
50.7
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
50.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
50.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
50.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
50.2
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
49.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
49.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
49.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
49.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
49.7
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
49.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
49.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
49.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
49.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
49.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
49.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
48.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
48.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
48.3
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
48.1
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
47.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
47.6
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
47.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
47.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
47.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
46.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
46.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
46.4
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
46.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
46.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
46.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
45.8
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
45.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
45.5
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
45.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
45.3
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
45.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
44.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
44.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
44.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
44.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
43.4
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
43.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
43.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
43.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
43.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
42.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
42.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
41.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
41.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
41.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
40.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
40.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
40.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
40.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
39.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
39.8
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
39.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
39.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
39.4
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
39.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
39.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
39.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
39.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
39.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
38.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
38.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
38.2
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
38.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
37.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
37.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
37.2
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
37.1
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
36.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
36.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
36.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
35.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
35.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
35.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
34.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
34.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
32.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
32.6
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
32.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
31.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
31.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
31.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
31.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
31.5
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
31.5
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
31.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
30.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
30.6
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
30.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
30.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
30.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
29.6
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
29.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
28.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
28.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
27.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
27.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
27.3
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
27.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
26.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
26.4
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
26.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
24.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
23.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
22.9
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
22.9
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
22.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
21.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
21.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
21.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
21.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
21.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
20.3
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
19.9
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
19.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
19.4
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
18.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
17.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
17.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
17.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
15.5
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
14.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
14.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
13.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
13.7
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
12.9
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
12.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
10.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
9.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
9.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
7.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
7.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
6.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HNRNPH1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
188.6
Number of samples
231
Samples
Sample
Description
TPM
DO45189
0 years, female, NA, stage:2, alive, 1200 days
441.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
407.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
395.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
380.7
DO48732
0 years, male, NA, stage:3, alive, 630 days
363.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
360.8
DO45225
0 years, male, NA, stage:1, alive, 1050 days
348.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
344.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
339.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
327.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
311.9
DO45301
0 years, male, NA, stage:2, dead, 1440 days
311.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
308.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
308.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
305.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
304.3
DO23537
0 years, male, NA, stage:2, dead, 900 days
291.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
284.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
283.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
281.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
280.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
279.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
279.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
277.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
277.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
276.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
273.4
DO48717
0 years, male, NA, stage:4, dead, 180 days
271.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
265.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
265.2
DO23548
0 years, female, NA, stage:1, alive, 840 days
263.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
261.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
261.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
261.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
261.0
DO23545
0 years, male, NA, stage:2, dead, 570 days
260.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
253.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
251.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
250.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
248.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
248.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
246.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
243.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
242.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
241.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
241.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
240.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
240.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
235.5
DO45267
0 years, male, NA, stage:3, dead, 570 days
234.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
234.2
DO45245
0 years, female, NA, stage:2, dead, 240 days
233.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
231.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
231.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
229.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
229.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
228.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
228.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
227.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
225.7
DO50802
0 years, male, NA, stage:2, alive, 930 days
224.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
224.2
DO45257
0 years, male, NA, stage:3, alive, 810 days
221.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
220.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
219.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
217.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
216.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
215.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
214.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
212.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
212.0
DO50811
0 years, male, NA, stage:1, alive, 450 days
211.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
211.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
210.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
209.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
208.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
206.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
204.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
204.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
204.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
202.8
DO23542
0 years, male, NA, stage:3, alive, 960 days
202.7
DO48681
0 years, male, NA, stage:2, alive, 900 days
201.9
DO45247
0 years, female, NA, stage:2, alive, 210 days
201.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
200.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
199.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
199.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
199.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
198.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
196.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
196.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
194.5
DO45275
0 years, male, NA, stage:3, dead, 10 days
193.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
193.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
193.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
193.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
192.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
191.8
DO45231
0 years, male, NA, stage:2, alive, 930 days
191.3
DO23529
0 years, male, NA, stage:4, alive, 930 days
189.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
189.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
189.5
DO50859
0 years, male, NA, stage:2, alive, 180 days
188.8
DO45215
0 years, male, NA, stage:2, alive, 1170 days
188.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
187.6
DO48693
0 years, male, NA, stage:2, alive, 900 days
187.2
DO45187
0 years, female, NA, stage:1, alive, 1260 days
186.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
186.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
184.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
184.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
184.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
183.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
182.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
181.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
181.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
181.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
180.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
180.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
179.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
177.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
177.1
DO45097
0 years, male, NA, stage:3, alive, 1620 days
173.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
173.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
173.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
173.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
172.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
172.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
172.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
171.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
170.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
170.4
DO23514
0 years, male, NA, stage:2, alive, 1290 days
169.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
168.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
168.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
168.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
168.3
DO45221
0 years, female, NA, stage:4, dead, 390 days
167.0
DO50787
0 years, male, NA, stage:3, alive, 480 days
166.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
166.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
166.5
DO45255
0 years, male, NA, stage:3, alive, 720 days
166.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
165.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
163.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
162.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
162.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
159.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
157.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
155.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
155.3
DO50804
0 years, male, NA, stage:2, alive, 720 days
155.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
154.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
153.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
153.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
153.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
153.1
DO45159
0 years, male, NA, stage:3, alive, 1470 days
152.5
DO23510
0 years, female, NA, stage:2, alive, 870 days
151.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
151.0
DO23539
0 years, male, NA, stage:1, alive, 1110 days
150.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
150.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
149.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
148.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
148.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
147.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
147.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
146.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
145.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
145.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
145.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
145.4
DO227643
0 years, male, NA, stage:2, alive, 1260 days
144.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
143.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
143.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
143.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
143.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
142.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
142.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
140.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
140.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
140.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
138.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
136.0
DO45109
0 years, male, NA, stage:2, alive, 1590 days
134.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
131.5
DO50776
0 years, male, NA, stage:1, alive, 690 days
131.2
DO50818
0 years, male, NA, stage:2, alive, 510 days
130.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
129.4
DO45145
0 years, male, NA, stage:3, dead, 60 days
129.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
129.0
DO45197
0 years, male, NA, stage:2, alive, 1170 days
128.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
127.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
125.3
DO50799
0 years, female, NA, stage:2, alive, 540 days
124.8
DO48725
0 years, male, NA, stage:1, alive, 780 days
123.2
DO48757
0 years, female, NA, stage:3, alive, 480 days
122.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
121.9
DO45125
0 years, male, NA, stage:3, alive, 1680 days
121.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
121.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
121.0
DO48759
0 years, male, NA, stage:3, alive, 720 days
120.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
119.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
117.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
116.6
DO45129
0 years, male, NA, stage:3, alive, 1470 days
114.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
113.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
112.1
DO45107
0 years, female, NA, stage:2, alive, 1710 days
111.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
110.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
110.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
109.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
108.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
108.7
DO50814
0 years, male, NA, stage:3, alive, 420 days
104.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
103.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
101.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
101.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
100.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
99.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
99.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
98.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
96.6
DO50839
0 years, female, NA, stage:3, alive, 330 days
96.2
DO45199
0 years, female, NA, stage:2, alive, 1350 days
93.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
87.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
85.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
84.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
77.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
77.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
54.3
DO45093
0 years, male, NA, stage:2, dead, 720 days
50.9
DO23511
0 years, female, NA, stage:3, dead, 180 days
20.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
865
Tumor
0.8
743
Tumor
0.8
965
Tumor
0.8
285
Tumor
0.7
877
Tumor
0.7
351
Tumor
0.6
497
Tumor
0.6
331
Tumor
0.6
131
Tumor
0.6
523
Tumor
0.5
777
Tumor
0.5
967
Tumor
0.5
313
Tumor
0.5
463
Tumor
0.5
367
Tumor
0.5
1021
Tumor
0.5
977
Tumor
0.5
737
Tumor
0.5
413
Tumor
0.5
983
Tumor
0.5
661
Tumor
0.5
383
Tumor
0.4
487
Tumor
0.4
277
Tumor
0.4
375
Tumor
0.4
527
Tumor
0.4
951
Tumor
0.4
957
Tumor
0.4
411
Tumor
0.4
355
Tumor
0.4
943
Tumor
0.4
385
Tumor
0.4
517
Tumor
0.4
663
Tumor
0.4
1013
Tumor
0.4
443
Tumor
0.3
785
Tumor
0.3
1041
Tumor
0.3
727
Tumor
0.3
447
Tumor
0.3
491
Tumor
0.3
425
Tumor
0.3
427
Tumor
0.3
813
Tumor
0.3
455
Tumor
0.3
815
Tumor
0.3
123
Tumor
0.3
695
Tumor
0.3
135
Tumor
0.3
467
Tumor
0.3
647
Tumor
0.3
671
Tumor
0.3
883
Tumor
0.3
537
Tumor
0.3
975
Tumor
0.3
724
Normal
0.3
1031
Tumor
0.3
571
Tumor
0.3
161
Tumor
0.3
573
Tumor
0.3
391
Tumor
0.3
545
Tumor
0.2
923
Tumor
0.2
431
Tumor
0.2
311
Tumor
0.2
567
Tumor
0.2
297
Tumor
0.2
817
Tumor
0.2
363
Tumor
0.2
271
Tumor
0.2
341
Tumor
0.2
635
Tumor
0.2
221
Tumor
0.2
881
Tumor
0.2
141
Tumor
0.2
112
Tumor
0.2
953
Tumor
0.2
861
Tumor
0.2
211
Tumor
0.2
535
Tumor
0.2
823
Tumor
0.2
937
Tumor
0.2
814
Normal
0.2
185
Tumor
0.2
395
Tumor
0.2
353
Tumor
0.2
1015
Tumor
0.2
515
Tumor
0.2
445
Tumor
0.2
393
Tumor
0.2
963
Tumor
0.2
227
Tumor
0.2
563
Tumor
0.1
755
Tumor
0.1
433
Tumor
0.1
665
Tumor
0.1
223
Tumor
0.1
283
Tumor
0.1
461
Tumor
0.1
261
Tumor
0.1
423
Tumor
0.1
525
Tumor
0.1
557
Tumor
0.1
641
Tumor
0.1
851
Tumor
0.1
867
Tumor
0.1
213
Tumor
0.1
267
Tumor
0.1
357
Tumor
0.1
1025
Tumor
0.1
533
Tumor
0.1
1043
Tumor
0.1
137
Tumor
0.1
913
Tumor
0.1
627
Tumor
0.1
685
Tumor
0.1
617
Tumor
0.1
435
Tumor
0.1
171
Tumor
0.1
493
Tumor
0.1
451
Tumor
0.1
911
Tumor
0.0
187
Tumor
0.0
415
Tumor
0.0
483
Tumor
0.0
863
Tumor
0.0
873
Tumor
0.0
715
Tumor
0.0
921
Tumor
0.0
553
Tumor
0.0
513
Tumor
0.0
387
Tumor
0.0
125
Tumor
0.0
217
Tumor
0.0
721
Tumor
0.0
917
Tumor
0.0
191
Tumor
0.0
498
Normal
0.0
145
Tumor
0.0
741
Tumor
0.0
365
Tumor
0.0
713
Tumor
0.0
113
Tumor
0.0
478
Normal
0.0
1045
Tumor
0.0
915
Tumor
0.0
492
Normal
0.0
471
Tumor
0.0
465
Tumor
0.0
697
Tumor
0.0
1028
Normal
0.0
327
Tumor
0.0
361
Tumor
0.0
268
Normal
0.0
538
Normal
0.0
615
Tumor
0.0
981
Tumor
0.0
384
Normal
-0.1
857
Tumor
-0.1
536
Normal
-0.1
312
Normal
-0.1
1027
Tumor
-0.1
192
Normal
-0.1
421
Tumor
-0.1
524
Normal
-0.1
488
Normal
-0.1
343
Tumor
-0.1
473
Tumor
-0.1
686
Normal
-0.1
484
Normal
-0.1
147
Tumor
-0.1
558
Normal
-0.1
142
Normal
-0.1
984
Normal
-0.1
231
Tumor
-0.1
716
Normal
-0.1
434
Normal
-0.1
481
Tumor
-0.1
1026
Normal
-0.1
444
Normal
-0.1
332
Normal
-0.1
477
Tumor
-0.1
1032
Normal
-0.1
195
Tumor
-0.1
1014
Normal
-0.1
146
Normal
-0.1
746
Normal
-0.1
818
Normal
-0.1
482
Normal
-0.1
554
Normal
-0.1
412
Normal
-0.1
874
Normal
-0.1
314
Normal
-0.1
954
Normal
-0.1
745
Tumor
-0.1
978
Normal
-0.1
958
Normal
-0.1
386
Normal
-0.1
328
Normal
-0.1
456
Normal
-0.1
858
Normal
-0.1
136
Normal
-0.1
756
Normal
-0.1
138
Normal
-0.1
964
Normal
-0.1
257
Tumor
-0.1
664
Normal
-0.2
786
Normal
-0.2
534
Normal
-0.2
464
Normal
-0.2
352
Normal
-0.2
816
Normal
-0.2
428
Normal
-0.2
966
Normal
-0.2
127
Tumor
-0.2
416
Normal
-0.2
976
Normal
-0.2
778
Normal
-0.2
696
Normal
-0.2
472
Normal
-0.2
572
Normal
-0.2
574
Normal
-0.2
344
Normal
-0.2
968
Normal
-0.2
132
Normal
-0.2
432
Normal
-0.2
436
Normal
-0.2
468
Normal
-0.2
662
Normal
-0.2
868
Normal
-0.2
422
Normal
-0.2
648
Normal
-0.2
196
Normal
-0.2
528
Normal
-0.2
925
Tumor
-0.2
878
Normal
-0.2
494
Normal
-0.2
1042
Normal
-0.2
824
Normal
-0.2
518
Normal
-0.2
955
Tumor
-0.2
666
Normal
-0.2
364
Normal
-0.2
618
Normal
-0.2
546
Normal
-0.2
414
Normal
-0.2
284
Normal
-0.2
224
Normal
-0.2
916
Normal
-0.2
924
Normal
-0.2
452
Normal
-0.2
628
Normal
-0.2
852
Normal
-0.2
214
Normal
-0.2
636
Normal
-0.2
526
Normal
-0.2
278
Normal
-0.2
298
Normal
-0.2
672
Normal
-0.2
714
Normal
-0.2
866
Normal
-0.2
212
Normal
-0.2
222
Normal
-0.2
362
Normal
-0.2
568
Normal
-0.2
1016
Normal
-0.2
864
Normal
-0.2
426
Normal
-0.2
356
Normal
-0.2
358
Normal
-0.2
228
Normal
-0.2
744
Normal
-0.2
188
Normal
-0.2
982
Normal
-0.2
396
Normal
-0.2
342
Normal
-0.2
111
Normal
-0.2
376
Normal
-0.2
514
Normal
-0.2
462
Normal
-0.2
882
Normal
-0.2
366
Normal
-0.2
926
Normal
-0.2
424
Normal
-0.2
218
Normal
-0.2
232
Normal
-0.2
564
Normal
-0.3
642
Normal
-0.3
516
Normal
-0.3
162
Normal
-0.3
738
Normal
-0.3
466
Normal
-0.3
446
Normal
-0.3
368
Normal
-0.3
1022
Normal
-0.3
124
Normal
-0.3
394
Normal
-0.3
272
Normal
-0.3
938
Normal
-0.3
148
Normal
-0.3
862
Normal
-0.3
616
Normal
-0.3
448
Normal
-0.3
114
Normal
-0.3
186
Normal
-0.3
722
Normal
-0.3
126
Normal
-0.3
698
Normal
-0.3
392
Normal
-0.3
262
Normal
-0.3
884
Normal
-0.3
922
Normal
-0.3
952
Normal
-0.3
354
Normal
-0.3
474
Normal
-0.3
723
Tumor
-0.3
912
Normal
-0.3
918
Normal
-0.3
286
Normal
-0.3
956
Normal
-0.3
1044
Normal
-0.3
258
Normal
-0.3
128
Normal
-0.3
172
Normal
-0.3
944
Normal
-0.3
388
Normal
-0.4
728
Normal
-0.4
742
Normal
-0.4
914
Normal
-0.4
1046
Normal
-0.4
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
