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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TCTN2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
4.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
14.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
14.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
11.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
10.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
10.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
10.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
9.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
9.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
8.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
7.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
7.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
7.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
7.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
6.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
6.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
6.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
6.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
6.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
6.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
5.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
5.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
5.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
5.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
5.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
5.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
5.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
5.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
4.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
4.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
4.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
4.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
4.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
3.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
3.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
3.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
3.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
3.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
3.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
2.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
2.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
2.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
2.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
2.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
2.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
2.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
2.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
2.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
2.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
2.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
2.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
2.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
2.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
2.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
2.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
2.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
1.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
1.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
1.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
1.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TCTN2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
44.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
42.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
40.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
35.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
35.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
35.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
34.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
34.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
34.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
34.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
33.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
33.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
32.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
32.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
32.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
31.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
31.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
31.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
31.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
30.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
30.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
30.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
30.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
30.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
30.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
30.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
30.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
30.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
29.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
29.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
29.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
29.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
29.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
29.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
29.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
29.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
28.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
28.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
28.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
28.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
28.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
28.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
27.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
27.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
27.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
27.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
27.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
27.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
27.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
27.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
27.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
27.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
27.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
26.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
26.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
26.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
26.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
26.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
26.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
26.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
26.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
26.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
26.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
25.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
25.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
25.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
25.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
25.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
25.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
25.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
24.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
24.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
24.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
24.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
24.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
24.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
24.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
24.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
24.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
23.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
23.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
23.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
23.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
23.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
23.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
23.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
23.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
23.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
23.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
23.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
23.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
22.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
22.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
22.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
22.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
22.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
22.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
22.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
22.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
22.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
22.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
22.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
22.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
22.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
22.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
22.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
22.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
22.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
21.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
21.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
21.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
21.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
21.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
21.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
21.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
21.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
21.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
21.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
21.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
21.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
21.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
21.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
21.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
21.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
21.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
21.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
21.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
21.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
21.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
21.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
21.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
21.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
20.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
20.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
20.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
20.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
20.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
20.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
20.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
20.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
20.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
20.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
20.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
20.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
20.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
20.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
20.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
20.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
20.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
20.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
20.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
20.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
19.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
19.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
19.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
19.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
19.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
19.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
19.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
19.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
19.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
19.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
19.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
19.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
19.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
19.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
19.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
19.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
19.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
19.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
19.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
19.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
18.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
18.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
18.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
18.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
18.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
18.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
18.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
18.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
18.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
18.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
18.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
18.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
18.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
18.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
18.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
18.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
18.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
18.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
18.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
18.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
18.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
18.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
18.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
18.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
18.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
18.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
18.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
18.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
18.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
17.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
17.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
17.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
17.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
17.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
17.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
17.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
17.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
17.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
17.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
17.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
17.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
17.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
17.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
17.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
17.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
17.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
17.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
17.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
17.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
17.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
17.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
17.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
17.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
17.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
17.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
17.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
17.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
16.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
16.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
16.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
16.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
16.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
16.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
16.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
16.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
16.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
16.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
16.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
16.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
16.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
16.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
16.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
16.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
16.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
16.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
16.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
16.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
16.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
16.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
16.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
15.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
15.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
15.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
15.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
15.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
15.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
15.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
15.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
15.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
15.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
15.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
15.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
15.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
15.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
15.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
15.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
15.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
15.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
15.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
15.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
15.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
15.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
15.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
14.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
14.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
14.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
14.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
14.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
14.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
14.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
14.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
14.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
14.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
14.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
14.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
14.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
14.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
14.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
14.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
14.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
14.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
14.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
14.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
14.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
14.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
14.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
14.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
14.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
14.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
14.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
13.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
13.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
13.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
13.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
13.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
13.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
13.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
13.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
13.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
13.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
13.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
13.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
13.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
13.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
13.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
13.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
13.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
13.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
13.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
13.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
12.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
12.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
12.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
12.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
12.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
12.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
12.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
12.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
12.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
12.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
12.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
12.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
12.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
12.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
12.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
12.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
12.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
12.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
12.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
12.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
12.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
12.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
12.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
12.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
12.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
12.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
12.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
12.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
11.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
11.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
11.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
11.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
11.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
11.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
11.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
11.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
11.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
11.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
11.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
11.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
11.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
11.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
11.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
11.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
11.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
11.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
11.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
11.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
11.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
11.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
11.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
11.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
11.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
11.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
11.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
10.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
10.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
10.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
10.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
10.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
10.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
10.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
10.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
10.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
10.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
10.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
10.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
10.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
10.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
10.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
10.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
10.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
10.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
10.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
10.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
10.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
10.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
10.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
10.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
10.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
10.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
10.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
10.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
10.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
9.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
9.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
9.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
9.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
9.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
9.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
9.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
9.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
9.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
9.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
9.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
9.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
9.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
9.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
9.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
9.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
9.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
9.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
9.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
9.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
8.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
8.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
8.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
8.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
8.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
8.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
8.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
8.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
8.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
8.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
8.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
8.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
8.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
8.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
8.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
8.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
8.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
8.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
8.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
8.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
8.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
8.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
7.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
7.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
7.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
7.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
7.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
7.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
7.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
7.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
7.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
7.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
7.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
7.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
7.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
7.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
6.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
6.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
6.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
6.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
6.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
6.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
6.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
6.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
6.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
6.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
6.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
6.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
6.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
5.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
5.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
5.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
5.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
5.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
5.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
5.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
5.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
5.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
5.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
5.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
5.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
5.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
4.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
4.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
4.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
4.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
3.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
3.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
3.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
3.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
3.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
3.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
3.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
2.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TCTN2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
51.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
47.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
37.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
36.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
35.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
33.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
32.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
30.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
30.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
29.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
29.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
29.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
28.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
28.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
28.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
27.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
26.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
26.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
26.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
26.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
26.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
25.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
25.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
25.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
23.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
23.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
23.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
23.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
23.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
23.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
23.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
22.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
22.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
22.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
22.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
21.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
21.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
21.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
21.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
21.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
21.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
21.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
20.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
20.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
20.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
20.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
19.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
19.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
19.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
19.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
19.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
18.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
18.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
18.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
18.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
17.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
17.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
17.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
17.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
16.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
16.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
16.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
16.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
16.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
15.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
15.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
15.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
15.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
15.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
15.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
15.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
15.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
15.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
14.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
14.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
14.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
14.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
13.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
13.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
13.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
13.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
13.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
13.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
12.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
12.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
12.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
12.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
11.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
11.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
11.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
11.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
10.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
9.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
8.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
8.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
8.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TCTN2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
71.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
60.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
60.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
59.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
53.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
51.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
51.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
48.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
48.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
47.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
44.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
44.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
43.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
43.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
42.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
41.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
41.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
41.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
40.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
40.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
39.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
39.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
39.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
38.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
38.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
38.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
38.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
37.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
37.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
37.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
37.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
36.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
36.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
36.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
35.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
35.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
35.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
35.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
34.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
34.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
34.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
34.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
34.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
33.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
33.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
33.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
33.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
32.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
32.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
32.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
32.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
32.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
32.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
32.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
31.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
31.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
31.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
30.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
30.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
30.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
30.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
30.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
30.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
30.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
29.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
29.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
29.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
29.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
29.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
29.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
28.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
28.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
28.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
28.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
28.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
28.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
28.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
28.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
28.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
27.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
27.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
27.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
27.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
26.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
26.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
26.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
26.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
26.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
26.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
26.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
25.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
25.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
24.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
24.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
24.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
24.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
24.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
24.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
24.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
24.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
23.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
23.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
23.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
23.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
23.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
23.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
23.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
23.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
23.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
23.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
22.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
22.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
22.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
22.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
22.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
22.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
22.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
22.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
22.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
22.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
22.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
22.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
22.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
21.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
21.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
21.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
21.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
21.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
21.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
20.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
20.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
20.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
20.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
20.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
20.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
20.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
20.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
20.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
20.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
20.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
20.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
19.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
19.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
19.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
19.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
19.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
19.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
19.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
19.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
19.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
19.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
18.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
18.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
18.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
18.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
18.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
18.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
18.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
18.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
18.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
18.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
18.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
18.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
18.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
18.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
18.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
18.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
18.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
18.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
17.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
17.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
17.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
17.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
17.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
17.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
17.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
17.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
17.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
17.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
16.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
16.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
16.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
16.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
16.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
16.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
16.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
16.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
16.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
15.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
15.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
15.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
15.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
15.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
15.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
15.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
15.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
15.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
14.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
14.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
14.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
14.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
14.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
14.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
14.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
14.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
14.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
14.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
13.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
13.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
13.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
13.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
13.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
13.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
13.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
13.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
12.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
12.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
12.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
12.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
12.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
12.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
11.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
11.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
11.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
11.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
11.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
11.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
11.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
11.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
11.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
11.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
11.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
10.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
10.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
10.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
10.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
10.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
10.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
10.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
10.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
10.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
10.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
10.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
9.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
9.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
9.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
9.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
9.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
9.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
9.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
9.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
8.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
8.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
8.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
8.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
7.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
7.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
7.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
7.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
7.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
7.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
6.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
6.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
6.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
6.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
5.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
5.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
5.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
5.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
5.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
4.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
3.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
3.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
2.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
