HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:5.2 nTPM
HPA Brain:17.3 nTPM
GTEx:5.2 nTPM
FANTOM5:14.2 Scaled Tags Per Million
Pig:21.8 nTPM
Mouse:8.5 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016711
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 17.3
Sample id Sample description nTPM
Hippocampus
nTPM: 15.6
2148 Female, age 91, left hemisphere 17.7
1911 Female, age 85, right hemisphere 17.2
2529 Female, age 94, left hemisphere 15.6
2621 Female, age 67, right hemisphere 15.2
1855 Male, age 76, left hemisphere 14.6
1898 Male, age 80, left hemisphere 13.4
Dentate gyrus
nTPM: 15.6
2528 Male, age 74, both hemispheres 16.9
2530 Female, age 94, left hemisphere 16.9
2531 Female, age 67, both hemispheres 16.3
2246 Female, age 85, both hemispheres 15.8
1927 Female, age 91, both hemispheres 14.2
2010 Male, age 76, both hemispheres 13.9
Entorhinal gyrus
nTPM: 16.7
2117 Female, age 91, right hemisphere 18.7
2764 Male, age 80, right hemisphere 18.1
2613 Female, age 94, left hemisphere 17.9
2686 Male, age 75, right hemisphere 16.4
1787 Male, age 76, left hemisphere 14.8
1938 Female, age 85, left hemisphere 14.5
Hippocampus, CA1
nTPM: 14.3
1873 Female, age 85, both hemispheres 15.8
2082 Female, age 91, right hemisphere 15.7
2527 Male, age 74, both hemispheres 15.2
2045 Male, age 76, both hemispheres 12.8
2749 Male, age 80, left hemisphere 11.8
Hippocampus, CA2
nTPM: 15.2
2113 Female, age 91, right hemisphere 16.9
2249 Male, age 74, both hemispheres 16.4
1940 Female, age 85, left hemisphere 16.0
1963 Male, age 80, left hemisphere 15.1
2437 Female, age 94, left hemisphere 15.0
1892 Male, age 76, both hemispheres 11.9
Hippocampus, CA3
nTPM: 15.0
1891 Female, age 85, both hemispheres 18.1
2620 Female, age 94, left hemisphere 17.8
2861 Female, age 67, both hemispheres 16.0
2436 Male, age 74, both hemispheres 14.0
1867 Male, age 76, both hemispheres 12.4
2137 Male, age 80, left hemisphere 12.0
Parahippocampal cortex
nTPM: 15.3
1990 Female, age 91, right hemisphere 18.1
2692 Male, age 74, both hemispheres 17.6
2532 Female, age 72, left hemisphere 16.5
2622 Female, age 67, right hemisphere 16.3
2693 Female, age 94, both hemispheres 15.1
1850 Male, age 80, both hemispheres 14.1
1933 Female, age 85, both hemispheres 13.9
2018 Male, age 76, both hemispheres 13.8
2245 Female, age 91, both hemispheres 13.8
2250 Female, age 67, right hemisphere 13.5
Perirhinal gyrus
nTPM: 13.9
2848 Male, age 76, right hemisphere 15.2
1841 Female, age 85, right hemisphere 14.3
2521 Female, age 94, right hemisphere 13.7
1794 Male, age 80, right hemisphere 13.6
1847 Female, age 91, left hemisphere 12.6
Subiculum
nTPM: 17.3
2619 Male, age 74, both hemispheres 18.4
2729 Female, age 91, right hemisphere 17.8
2042 Male, age 76, both hemispheres 17.5
1977 Female, age 85, both hemispheres 16.9
1901 Male, age 80, both hemispheres 16.7
2438 Female, age 94, left hemisphere 16.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 5.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 5.2
Samples: 197

Max nTPM: 11.7
Min nTPM: 1.1
Std nTPM: 1.5
Median nTPM: 5.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 11.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 10.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 9.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 9.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 9.1
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 8.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 8.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 8.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 8.1
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 8.1
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 8.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 14.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.2
FF:10153-102I9 76 years, female 16.9
FF:10169-103B7 60 years, female 11.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 21.8
Pig sample Sample description nTPM
Subiculum
nTPM: 17.1
Samples: 4

Max nTPM: 20.3
Min nTPM: 15.1
Sample A Female 20.3
Sample B Female 16.7
Sample C Male 16.3
Sample D Male 15.1
Dorsal hippocampus
nTPM: 21.8
Samples: 4

Max nTPM: 26.3
Min nTPM: 17.4
Sample A Female 23.7
Sample B Female 26.3
Sample C Male 17.4
Sample D Male 19.8
Entorhinal cortex
nTPM: 16.3
Samples: 4

Max nTPM: 17.2
Min nTPM: 14.4
Sample A Female 16.8
Sample B Female 16.8
Sample C Male 17.2
Sample D Male 14.4
Ventral hippocampus
nTPM: 19.7
Samples: 4

Max nTPM: 23.8
Min nTPM: 15.3
Sample A Female 17.3
Sample B Female 15.3
Sample C Male 23.8
Sample D Male 22.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 8.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.4
Samples: 4

Max nTPM: 9.1
Min nTPM: 7.7
Sample A Male 8.6
Sample B Male 7.7
Sample C Female 8.0
Sample D Female 9.1
Hippocampal formation
nTPM: 8.5
Samples: 4

Max nTPM: 9.0
Min nTPM: 7.6
Sample A Male 8.2
Sample B Male 9.0
Sample C Female 9.0
Sample D Female 7.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
76003515 Antisense, RP_060608_02_E08, Mouse strain C57BL/6J (56 days, male) 1.2

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