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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HJV is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
136.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
722.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
662.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
643.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
604.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
522.3
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
485.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
462.7
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
429.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
416.9
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
414.8
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
411.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
401.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
390.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
385.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
377.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
375.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
372.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
370.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
369.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
358.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
352.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
329.6
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
329.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
326.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
324.4
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
319.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
314.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
310.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
310.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
306.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
304.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
302.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
302.4
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
301.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
291.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
289.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
287.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
286.4
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
282.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
281.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
281.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
280.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
270.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
265.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
262.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
262.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
260.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
259.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
252.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
250.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
249.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
248.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
247.5
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
246.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
245.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
243.0
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
242.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
241.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
240.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
240.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
240.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
239.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
238.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
235.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
234.3
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
233.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
226.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
224.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
223.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
222.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
222.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
221.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
219.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
212.8
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
211.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
211.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
210.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
209.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
209.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
208.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
207.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
204.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
203.4
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
195.9
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
195.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
195.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
193.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
192.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
192.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
191.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
191.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
189.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
188.4
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
188.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
186.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
186.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
185.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
183.8
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
183.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
182.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
181.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
180.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
178.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
175.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
174.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
174.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
173.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
173.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
173.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
172.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
172.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
171.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
169.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
169.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
168.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
168.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
168.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
167.9
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
165.7
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
165.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
164.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
162.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
162.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
159.8
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
158.0
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
156.6
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
156.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
155.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
155.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
153.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
153.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
152.0
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
149.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
149.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
147.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
146.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
143.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
143.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
143.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
143.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
140.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
140.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
140.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
139.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
138.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
137.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
137.8
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
137.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
136.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
135.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
135.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
135.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
131.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
130.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
128.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
128.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
127.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
127.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
126.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
125.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
124.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
123.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
123.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
123.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
122.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
122.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
122.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
122.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
120.6
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
119.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
119.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
118.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
118.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
118.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
116.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
116.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
114.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
113.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
112.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
111.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
110.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
110.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
110.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
109.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
109.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
109.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
106.5
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
106.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
105.8
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
104.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
103.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
102.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
101.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
100.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
100.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
100.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
100.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
99.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
99.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
98.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
98.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
96.8
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
96.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
95.7
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
94.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
94.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
94.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
93.5
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
92.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
91.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
90.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
89.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
89.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
89.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
88.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
88.4
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
88.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
87.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
87.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
87.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
86.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
85.9
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
85.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
85.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
84.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
84.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
83.9
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
82.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
82.0
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
81.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
81.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
79.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
79.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
78.8
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
78.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
76.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
73.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
73.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
69.4
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
68.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
68.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
68.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
68.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
67.7
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
65.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
64.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
64.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
64.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
63.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
63.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
63.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
63.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
62.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
62.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
61.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
61.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
60.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
60.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
59.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
59.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
59.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
58.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
58.5
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
58.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
57.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
56.6
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
56.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
54.9
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
54.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
52.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
52.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
52.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
51.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
50.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
49.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
48.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
48.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
46.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
44.7
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
44.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
44.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
43.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
43.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
42.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
41.8
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
41.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
41.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
41.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
39.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
38.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
38.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
37.9
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
36.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
36.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
36.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
34.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
31.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
31.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
31.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
30.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
30.1
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
29.3
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
29.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
28.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
28.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
26.5
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
26.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
24.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
23.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
21.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
21.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
19.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
19.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
19.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
18.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
18.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
17.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
16.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
13.6
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
13.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
12.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
12.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
12.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
11.8
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
11.3
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
10.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
9.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
9.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
8.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
8.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
8.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
7.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
7.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
7.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
6.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
6.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
5.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
4.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
4.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
4.1
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
3.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
3.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
2.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
2.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
2.4
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
2.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
2.2
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
2.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
2.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
0.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
0.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
0.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
0.4
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
0.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
0.2
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
0.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
0.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
0.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
0.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
0.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
0.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
615
Tumor
1.5
487
Tumor
1.4
814
Normal
1.4
445
Tumor
1.4
715
Tumor
1.3
523
Tumor
1.3
647
Tumor
1.2
393
Tumor
1.1
665
Tumor
1.1
387
Tumor
1.1
435
Tumor
1.0
221
Tumor
0.9
635
Tumor
0.9
515
Tumor
0.8
481
Tumor
0.8
147
Tumor
0.8
213
Tumor
0.8
357
Tumor
0.7
451
Tumor
0.7
171
Tumor
0.7
823
Tumor
0.7
977
Tumor
0.7
473
Tumor
0.7
467
Tumor
0.7
713
Tumor
0.7
1025
Tumor
0.7
513
Tumor
0.6
937
Tumor
0.6
1043
Tumor
0.6
411
Tumor
0.6
557
Tumor
0.6
975
Tumor
0.6
271
Tumor
0.6
267
Tumor
0.5
641
Tumor
0.5
497
Tumor
0.5
777
Tumor
0.5
361
Tumor
0.5
187
Tumor
0.5
161
Tumor
0.5
191
Tumor
0.5
1027
Tumor
0.4
957
Tumor
0.4
1041
Tumor
0.4
217
Tumor
0.4
223
Tumor
0.4
952
Normal
0.4
617
Tumor
0.4
817
Tumor
0.4
867
Tumor
0.4
257
Tumor
0.4
363
Tumor
0.3
965
Tumor
0.3
232
Normal
0.3
218
Normal
0.3
443
Tumor
0.3
824
Normal
0.3
571
Tumor
0.3
355
Tumor
0.3
327
Tumor
0.3
461
Tumor
0.3
195
Tumor
0.3
268
Normal
0.3
482
Normal
0.3
955
Tumor
0.3
272
Normal
0.2
953
Tumor
0.2
574
Normal
0.2
277
Tumor
0.2
493
Tumor
0.2
861
Tumor
0.2
231
Tumor
0.2
1013
Tumor
0.2
785
Tumor
0.2
433
Tumor
0.2
627
Tumor
0.2
258
Normal
0.2
963
Tumor
0.2
484
Normal
0.2
391
Tumor
0.2
186
Normal
0.2
616
Normal
0.2
857
Tumor
0.2
1045
Tumor
0.2
222
Normal
0.2
1026
Normal
0.1
262
Normal
0.1
642
Normal
0.1
313
Tumor
0.1
356
Normal
0.1
148
Normal
0.1
162
Normal
0.1
188
Normal
0.1
286
Normal
0.1
344
Normal
0.1
866
Normal
0.1
863
Tumor
0.1
212
Normal
0.1
228
Normal
0.1
185
Tumor
0.1
786
Normal
0.1
342
Normal
0.1
648
Normal
0.1
636
Normal
0.1
1022
Normal
0.1
358
Normal
0.1
455
Tumor
0.1
365
Tumor
0.1
353
Tumor
0.1
368
Normal
0.1
874
Normal
0.1
518
Normal
0.0
983
Tumor
0.0
483
Tumor
0.0
956
Normal
0.0
873
Tumor
0.0
697
Tumor
0.0
666
Normal
0.0
662
Normal
0.0
756
Normal
0.0
525
Tumor
0.0
172
Normal
0.0
968
Normal
0.0
572
Normal
0.0
526
Normal
0.0
328
Normal
0.0
1028
Normal
0.0
755
Tumor
0.0
352
Normal
0.0
564
Normal
0.0
462
Normal
0.0
412
Normal
0.0
261
Tumor
0.0
663
Tumor
-0.1
366
Normal
-0.1
721
Tumor
-0.1
1046
Normal
-0.1
943
Tumor
-0.1
868
Normal
-0.1
664
Normal
-0.1
386
Normal
-0.1
516
Normal
-0.1
416
Normal
-0.1
714
Normal
-0.1
415
Tumor
-0.1
354
Normal
-0.1
865
Tumor
-0.1
864
Normal
-0.1
314
Normal
-0.1
851
Tumor
-0.1
1042
Normal
-0.1
471
Tumor
-0.1
1016
Normal
-0.1
474
Normal
-0.1
431
Tumor
-0.1
964
Normal
-0.1
558
Normal
-0.1
568
Normal
-0.1
214
Normal
-0.1
492
Normal
-0.1
312
Normal
-0.1
982
Normal
-0.1
672
Normal
-0.1
477
Tumor
-0.1
298
Normal
-0.1
746
Normal
-0.1
862
Normal
-0.1
563
Tumor
-0.1
332
Normal
-0.1
278
Normal
-0.1
517
Tumor
-0.1
745
Tumor
-0.1
364
Normal
-0.1
966
Normal
-0.2
472
Normal
-0.2
514
Normal
-0.2
196
Normal
-0.2
488
Normal
-0.2
628
Normal
-0.2
494
Normal
-0.2
392
Normal
-0.2
1015
Tumor
-0.2
284
Normal
-0.2
394
Normal
-0.2
227
Tumor
-0.2
944
Normal
-0.2
448
Normal
-0.2
536
Normal
-0.2
696
Normal
-0.2
524
Normal
-0.2
396
Normal
-0.2
778
Normal
-0.2
1014
Normal
-0.2
818
Normal
-0.2
1044
Normal
-0.2
388
Normal
-0.2
698
Normal
-0.2
1032
Normal
-0.2
938
Normal
-0.2
456
Normal
-0.2
984
Normal
-0.2
436
Normal
-0.2
1031
Tumor
-0.2
452
Normal
-0.3
618
Normal
-0.3
343
Tumor
-0.3
285
Tumor
-0.3
978
Normal
-0.3
858
Normal
-0.3
384
Normal
-0.3
498
Normal
-0.3
362
Normal
-0.3
1021
Tumor
-0.3
852
Normal
-0.3
434
Normal
-0.3
341
Tumor
-0.4
813
Tumor
-0.4
297
Tumor
-0.4
573
Tumor
-0.4
478
Normal
-0.4
686
Normal
-0.4
376
Normal
-0.4
463
Tumor
-0.4
685
Tumor
-0.4
722
Normal
-0.4
981
Tumor
-0.5
464
Normal
-0.5
535
Tumor
-0.5
468
Normal
-0.5
951
Tumor
-0.5
567
Tumor
-0.5
192
Normal
-0.5
954
Normal
-0.5
716
Normal
-0.6
224
Normal
-0.6
447
Tumor
-0.6
695
Tumor
-0.6
446
Normal
-0.6
816
Normal
-0.6
958
Normal
-0.6
976
Normal
-0.6
466
Normal
-0.7
465
Tumor
-0.7
351
Tumor
-0.7
367
Tumor
-0.7
671
Tumor
-0.7
375
Tumor
-0.7
432
Normal
-0.8
383
Tumor
-1.0
661
Tumor
-1.0
331
Tumor
-1.1
283
Tumor
-1.1
444
Normal
-1.2
491
Tumor
-1.2
311
Tumor
-1.3
395
Tumor
-1.7
385
Tumor
-1.7
815
Tumor
-2.1
967
Tumor
-2.2
211
Tumor
-2.9
111
Normal
N/A
112
Tumor
N/A
113
Tumor
N/A
114
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
123
Tumor
N/A
124
Normal
N/A
125
Tumor
N/A
126
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
131
Tumor
N/A
132
Normal
N/A
135
Tumor
N/A
136
Normal
N/A
137
Tumor
N/A
138
Normal
N/A
141
Tumor
N/A
142
Normal
N/A
145
Tumor
N/A
146
Normal
N/A
723
Tumor
N/A
724
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
737
Tumor
N/A
738
Normal
N/A
741
Tumor
N/A
742
Normal
N/A
743
Tumor
N/A
744
Normal
N/A
877
Tumor
N/A
878
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
883
Tumor
N/A
884
Normal
N/A
527
Tumor
N/A
528
Normal
N/A
533
Tumor
N/A
413
Tumor
N/A
534
Normal
N/A
414
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
421
Tumor
N/A
422
Normal
N/A
423
Tumor
N/A
424
Normal
N/A
545
Tumor
N/A
425
Tumor
N/A
546
Normal
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
553
Tumor
N/A
554
Normal
N/A
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.