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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEPTIN2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
67.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
178.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
169.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
169.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
140.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
138.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
134.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
134.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
119.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
116.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
114.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
106.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
98.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
92.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
89.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
84.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
83.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
82.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
82.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
79.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
77.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
73.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
72.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
70.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
69.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
67.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
66.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
66.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
64.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
62.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
61.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
61.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
59.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
58.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
57.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
56.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
55.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
54.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
53.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
51.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
48.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
46.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
45.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
45.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
44.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
41.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
41.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
41.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
39.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
38.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
36.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
35.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
34.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
31.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
31.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
30.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
30.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
29.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
28.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
27.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
27.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
23.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
20.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
19.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEPTIN2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
161.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
470.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
353.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
345.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
336.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
311.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
307.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
302.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
295.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
283.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
283.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
282.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
280.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
278.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
276.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
276.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
272.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
271.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
266.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
265.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
265.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
265.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
264.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
264.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
260.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
258.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
258.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
258.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
257.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
257.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
257.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
256.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
255.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
254.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
254.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
254.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
254.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
253.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
252.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
251.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
250.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
250.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
249.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
249.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
248.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
247.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
247.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
246.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
246.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
244.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
243.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
242.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
242.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
242.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
239.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
236.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
235.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
235.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
234.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
234.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
234.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
233.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
233.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
232.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
231.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
231.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
231.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
230.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
230.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
230.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
229.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
228.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
228.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
227.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
227.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
226.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
224.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
224.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
224.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
223.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
222.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
222.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
222.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
222.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
222.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
222.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
222.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
221.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
221.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
221.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
221.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
219.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
219.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
218.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
218.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
218.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
218.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
218.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
218.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
218.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
217.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
217.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
217.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
217.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
216.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
216.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
216.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
215.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
213.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
213.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
213.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
212.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
212.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
211.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
211.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
208.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
208.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
208.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
208.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
207.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
207.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
207.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
206.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
206.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
205.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
205.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
205.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
205.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
204.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
204.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
204.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
204.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
204.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
203.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
203.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
202.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
202.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
201.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
201.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
200.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
200.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
199.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
197.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
197.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
197.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
197.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
196.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
196.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
196.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
196.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
196.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
195.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
195.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
194.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
194.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
193.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
193.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
192.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
192.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
192.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
192.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
191.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
191.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
191.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
191.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
190.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
189.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
189.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
189.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
189.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
189.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
189.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
188.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
188.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
188.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
188.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
188.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
188.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
187.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
187.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
187.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
187.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
187.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
186.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
186.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
185.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
185.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
185.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
185.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
184.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
183.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
183.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
182.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
182.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
182.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
181.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
181.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
181.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
180.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
180.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
180.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
180.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
179.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
179.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
179.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
179.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
178.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
178.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
177.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
177.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
176.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
176.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
176.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
176.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
175.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
175.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
174.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
174.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
174.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
174.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
173.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
173.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
172.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
172.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
172.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
172.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
172.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
172.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
172.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
171.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
171.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
171.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
171.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
171.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
171.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
171.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
170.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
170.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
170.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
170.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
169.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
168.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
168.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
168.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
167.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
167.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
166.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
166.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
166.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
166.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
165.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
165.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
164.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
164.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
164.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
163.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
163.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
162.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
162.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
162.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
162.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
162.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
162.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
161.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
161.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
161.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
160.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
160.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
160.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
160.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
159.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
159.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
159.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
158.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
158.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
157.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
157.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
157.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
157.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
157.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
157.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
156.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
156.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
155.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
155.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
155.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
153.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
153.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
153.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
153.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
153.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
153.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
152.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
151.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
151.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
151.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
151.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
150.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
150.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
150.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
150.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
150.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
150.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
150.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
149.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
149.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
149.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
149.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
148.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
147.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
147.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
147.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
146.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
146.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
146.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
145.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
145.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
143.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
142.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
142.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
142.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
141.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
141.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
141.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
140.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
140.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
139.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
139.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
138.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
138.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
138.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
137.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
137.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
137.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
137.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
137.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
137.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
137.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
136.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
136.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
136.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
136.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
135.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
135.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
135.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
135.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
135.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
134.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
133.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
133.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
133.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
132.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
132.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
131.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
131.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
131.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
131.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
130.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
130.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
129.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
129.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
128.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
128.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
128.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
128.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
127.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
127.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
127.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
127.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
126.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
126.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
125.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
124.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
124.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
124.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
124.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
123.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
123.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
123.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
123.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
122.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
122.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
121.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
120.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
120.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
120.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
119.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
119.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
119.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
119.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
119.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
119.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
119.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
118.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
117.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
117.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
116.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
116.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
116.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
115.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
115.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
114.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
114.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
113.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
113.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
113.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
113.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
113.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
113.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
112.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
112.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
112.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
110.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
110.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
110.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
110.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
109.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
108.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
108.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
107.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
105.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
105.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
104.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
104.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
104.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
103.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
102.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
101.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
101.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
100.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
100.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
100.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
100.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
100.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
99.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
98.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
98.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
98.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
97.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
97.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
96.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
96.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
96.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
95.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
95.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
94.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
94.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
94.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
93.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
92.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
92.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
91.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
91.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
91.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
90.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
90.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
89.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
89.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
88.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
88.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
87.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
87.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
87.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
87.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
85.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
85.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
85.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
85.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
84.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
84.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
83.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
82.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
82.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
82.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
81.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
81.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
81.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
81.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
80.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
78.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
77.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
76.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
76.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
75.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
72.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
71.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
68.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
68.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
67.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
66.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
65.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
64.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
64.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
64.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
63.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
61.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
60.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
60.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
58.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
57.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
55.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
53.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
52.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
52.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
50.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
50.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
45.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
45.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
44.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
43.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
42.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
40.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
38.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
38.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
37.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
34.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
33.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
26.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
26.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
20.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
18.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEPTIN2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
195.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
371.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
323.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
318.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
310.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
294.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
292.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
285.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
283.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
283.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
283.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
283.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
282.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
266.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
264.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
258.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
258.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
257.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
253.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
251.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
249.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
249.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
245.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
243.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
240.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
237.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
237.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
235.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
230.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
229.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
228.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
227.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
222.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
222.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
220.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
218.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
216.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
214.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
212.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
208.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
208.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
207.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
204.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
204.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
204.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
203.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
201.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
197.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
197.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
196.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
196.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
187.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
187.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
185.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
184.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
183.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
183.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
183.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
179.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
178.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
177.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
176.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
174.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
173.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
172.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
171.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
170.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
167.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
165.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
164.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
161.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
160.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
159.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
158.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
149.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
148.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
146.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
146.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
145.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
145.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
138.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
138.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
136.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
135.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
135.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
134.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
132.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
130.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
128.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
123.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
119.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
119.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
117.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
117.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
109.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
102.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
101.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
91.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
73.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
67.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEPTIN2 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
149.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
604.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
520.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
463.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
372.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
368.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
361.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
348.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
345.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
320.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
319.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
316.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
311.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
289.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
288.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
276.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
266.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
265.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
260.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
260.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
259.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
256.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
255.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
252.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
250.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
250.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
249.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
248.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
245.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
245.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
242.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
241.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
239.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
239.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
236.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
236.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
236.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
235.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
234.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
233.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
232.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
231.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
230.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
228.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
226.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
226.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
224.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
224.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
220.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
219.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
218.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
214.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
213.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
208.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
206.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
204.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
200.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
199.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
199.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
198.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
198.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
198.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
198.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
197.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
196.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
194.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
193.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
192.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
190.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
188.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
188.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
186.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
184.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
184.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
183.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
182.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
182.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
181.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
181.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
179.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
179.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
179.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
178.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
178.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
178.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
177.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
176.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
176.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
176.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
174.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
174.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
173.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
172.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
172.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
171.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
170.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
170.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
169.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
169.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
167.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
166.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
165.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
163.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
162.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
162.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
162.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
162.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
162.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
162.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
162.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
161.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
161.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
159.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
159.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
158.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
158.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
157.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
156.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
156.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
154.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
154.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
153.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
153.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
152.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
151.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
149.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
148.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
148.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
147.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
147.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
146.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
146.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
141.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
139.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
139.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
138.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
137.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
137.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
137.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
136.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
135.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
134.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
134.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
133.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
132.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
131.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
131.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
129.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
129.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
129.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
129.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
127.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
127.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
127.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
127.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
126.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
126.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
126.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
125.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
124.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
124.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
122.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
122.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
120.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
119.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
118.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
116.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
115.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
115.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
115.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
114.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
113.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
113.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
112.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
112.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
112.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
111.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
110.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
109.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
109.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
109.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
108.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
108.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
106.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
106.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
104.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
104.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
103.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
103.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
103.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
102.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
102.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
102.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
101.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
101.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
100.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
100.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
99.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
99.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
99.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
99.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
98.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
98.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
97.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
97.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
95.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
94.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
93.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
92.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
92.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
92.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
91.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
91.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
91.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
90.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
90.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
89.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
89.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
89.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
89.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
89.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
88.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
88.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
87.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
87.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
86.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
86.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
85.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
83.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
83.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
83.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
82.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
81.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
81.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
80.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
80.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
80.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
79.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
78.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
78.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
78.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
76.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
76.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
75.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
74.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
73.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
73.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
73.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
72.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
72.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
72.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
71.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
70.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
67.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
67.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
66.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
65.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
64.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
63.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
63.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
63.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
61.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
61.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
58.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
57.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
54.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
53.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
53.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
52.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
51.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
51.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
50.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
49.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
48.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
43.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
43.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
43.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
40.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
39.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
32.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
30.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
24.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
23.1
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.