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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MGAT2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
49.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
47.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
45.8
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
44.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
43.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
43.2
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
42.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
41.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
40.9
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
40.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
40.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
38.8
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
38.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
37.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
36.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
36.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
36.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
35.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
34.7
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
33.8
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
33.6
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
33.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
33.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
31.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
31.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
30.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
30.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
30.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
30.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
30.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
29.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
29.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
28.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
28.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
28.7
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
28.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
28.3
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
28.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
28.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
27.6
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
27.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
27.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
26.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
26.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
26.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
26.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
26.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
26.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
26.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
26.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
25.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
25.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
25.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
25.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
25.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
25.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
25.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
25.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
24.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
24.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
24.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
24.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
24.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
24.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
24.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
24.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
24.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
23.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
23.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
23.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
23.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
23.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
23.4
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
23.3
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
23.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
23.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
23.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
23.0
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
22.8
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
22.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
22.6
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
22.6
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
22.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
22.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
22.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
22.3
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
22.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
22.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
21.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
21.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
21.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
21.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
21.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
21.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
21.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
21.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
21.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
21.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
21.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
20.9
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
20.8
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
20.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
20.7
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
20.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
20.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
20.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
20.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
20.1
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
20.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
20.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
19.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
19.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
19.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
19.8
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
19.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
19.6
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
19.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
19.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
19.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
19.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
19.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
19.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
19.2
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
19.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
19.1
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
19.0
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
19.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
18.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
18.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
18.9
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
18.9
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
18.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
18.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
18.7
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
18.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
18.5
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
18.5
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
18.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
18.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
18.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
18.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
17.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
17.7
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
17.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
17.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
17.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
17.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
17.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
17.3
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
17.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
17.2
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
17.2
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
17.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
17.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
17.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
17.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
17.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
16.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
16.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
16.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
16.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
16.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
16.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
16.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
16.6
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
16.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
16.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
16.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
16.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
16.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
16.3
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
16.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
16.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
16.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
16.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
16.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
16.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
16.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
15.9
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
15.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
15.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
15.7
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
15.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
15.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
15.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
15.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
15.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
15.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
15.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
15.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
15.2
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
15.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
15.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
15.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
15.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
15.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
15.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
15.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
15.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
14.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
14.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
14.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
14.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
14.6
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
14.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
14.6
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
14.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
14.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
14.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
14.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
14.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
14.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
14.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
14.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
13.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
13.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
13.7
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
13.6
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
13.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
13.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
13.4
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
13.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
13.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
13.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
13.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
13.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
13.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
13.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
13.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
13.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
13.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
13.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
13.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
13.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
12.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
12.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
12.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
12.7
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
12.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
12.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
12.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
12.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
12.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
12.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
12.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
12.5
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
12.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
12.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
12.4
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
12.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
12.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
12.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
12.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
12.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
12.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
12.1
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
11.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
11.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
11.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
11.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
11.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
11.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
11.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
11.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
11.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
11.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
11.3
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
11.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
11.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
11.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
11.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
11.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
11.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
10.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
10.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
10.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
10.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
10.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
10.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
10.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
10.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
10.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
10.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
10.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
10.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
10.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
9.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
9.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
9.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
9.5
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
9.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
9.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
9.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
9.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
9.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
9.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
9.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
9.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
9.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
9.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
9.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
8.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
8.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
8.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
8.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
8.7
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
8.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
8.6
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
8.4
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
8.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
8.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
8.4
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
8.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
8.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
8.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
8.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
8.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
8.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
8.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
8.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
8.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
8.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
7.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
7.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
7.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
7.7
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
7.7
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
7.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
7.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
7.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
7.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
7.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
7.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
6.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
6.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
6.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
6.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
6.2
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
6.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
6.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
6.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
6.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
5.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
5.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
5.8
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
5.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
5.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
5.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
5.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
5.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
5.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
5.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
5.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
5.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
5.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
4.6
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
4.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
3.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
3.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MGAT2 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.9
Number of samples
231
Samples
Sample
Description
TPM
DO45119
0 years, male, NA, stage:3, dead, 510 days
43.8
DO45237
0 years, male, NA, stage:2, alive, 900 days
41.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
38.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
34.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
32.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
32.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
31.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
30.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
29.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
29.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
29.3
DO45117
0 years, female, NA, stage:2, dead, 1110 days
29.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
28.9
DO48741
0 years, male, NA, stage:3, alive, 240 days
28.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
28.0
DO45197
0 years, male, NA, stage:2, alive, 1170 days
27.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
27.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
26.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
26.9
DO45177
0 years, female, NA, stage:3, alive, 1260 days
25.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
25.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
25.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
25.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
24.9
DO23537
0 years, male, NA, stage:2, dead, 900 days
24.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
24.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
24.0
DO45153
0 years, female, NA, stage:2, alive, 1380 days
23.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
23.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
23.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
23.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
23.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
23.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
23.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
23.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
23.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
23.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
23.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
23.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
22.4
DO45107
0 years, female, NA, stage:2, alive, 1710 days
22.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
22.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
22.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
22.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
21.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
21.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
21.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
21.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
21.4
DO23535
0 years, male, NA, stage:1, alive, 960 days
21.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
20.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
20.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
20.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
20.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
20.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
20.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
20.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
20.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
19.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
19.8
DO23525
0 years, male, NA, stage:4, alive, 1050 days
19.7
DO45135
0 years, male, NA, stage:1, alive, 1410 days
19.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
19.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
19.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
19.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
19.2
DO50787
0 years, male, NA, stage:3, alive, 480 days
19.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
19.0
DO50813
0 years, male, NA, stage:2, alive, 420 days
18.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
18.9
DO45203
0 years, female, NA, stage:2, alive, 1170 days
18.9
DO50855
0 years, male, NA, stage:2, alive, 570 days
18.7
DO45287
0 years, male, NA, stage:1, alive, 390 days
18.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
18.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
18.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
18.5
DO50825
0 years, male, NA, stage:2, alive, 390 days
18.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
18.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
18.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
18.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
18.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
18.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
18.1
DO45159
0 years, male, NA, stage:3, alive, 1470 days
18.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
17.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
17.8
DO45257
0 years, male, NA, stage:3, alive, 810 days
17.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
17.7
DO45263
0 years, male, NA, stage:3, dead, 270 days
17.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
17.7
DO45301
0 years, male, NA, stage:2, dead, 1440 days
17.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
17.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
17.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
17.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
17.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
17.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
17.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
17.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
17.2
DO45165
0 years, male, NA, stage:2, alive, 690 days
17.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
17.0
DO45103
0 years, male, NA, stage:3, alive, 450 days
16.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
16.9
DO45141
0 years, male, NA, stage:2, alive, 1320 days
16.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
16.8
DO50778
0 years, male, NA, stage:4, alive, 630 days
16.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
16.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
16.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
16.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
16.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
16.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
16.6
DO45275
0 years, male, NA, stage:3, dead, 10 days
16.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
16.4
DO45219
0 years, male, NA, stage:2, alive, 1080 days
16.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
16.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
16.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
16.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
15.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
15.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
15.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
15.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
15.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
15.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
15.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
15.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
15.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
15.4
DO45281
0 years, male, NA, stage:4, alive, 750 days
15.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
15.4
DO45193
0 years, female, NA, stage:4, dead, 120 days
15.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
15.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
15.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
15.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
15.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
15.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
15.0
DO45243
0 years, female, NA, stage:3, alive, 930 days
14.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
14.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
14.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
14.7
DO48736
0 years, female, NA, stage:1, alive, 600 days
14.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
14.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
14.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
14.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
14.3
DO50840
0 years, male, NA, stage:2, alive, 330 days
14.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
14.2
DO23531
0 years, female, NA, stage:3, alive, 900 days
14.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
14.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
14.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
14.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
13.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
13.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
13.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
13.7
DO227801
0 years, female, NA, stage:1, alive, 660 days
13.6
DO48727
0 years, female, NA, stage:2, dead, 390 days
13.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
13.5
DO45163
0 years, male, NA, stage:2, alive, 960 days
13.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
13.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
13.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
13.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
13.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
13.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
13.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
12.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
12.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
12.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
12.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
12.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
12.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
12.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
12.5
DO23549
0 years, male, NA, stage:3, alive, 990 days
12.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
12.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
12.2
DO45115
0 years, male, NA, stage:2, alive, 840 days
12.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
12.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
12.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
11.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
11.8
DO23534
0 years, male, NA, stage:2, alive, 840 days
11.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
11.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
11.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
11.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
11.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
11.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
11.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
11.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
11.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
11.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
11.1
DO48733
0 years, male, NA, stage:2, alive, 600 days
11.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
11.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
11.0
DO23543
0 years, male, NA, stage:2, alive, 1020 days
10.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
10.8
DO48737
0 years, male, NA, stage:1, alive, 720 days
10.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
10.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
10.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
10.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
10.4
DO45213
0 years, male, NA, stage:1, alive, 1200 days
10.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
10.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
10.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
10.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
10.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
10.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
10.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
10.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
9.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
9.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
9.8
DO45195
0 years, male, NA, stage:1, alive, 390 days
9.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
9.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
8.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
8.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
8.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
8.4
DO50816
0 years, male, NA, stage:2, alive, 390 days
8.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
8.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
7.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
7.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
7.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
7.1
DO23540
0 years, male, NA, stage:1, alive, 750 days
6.9
DO45285
0 years, male, NA, stage:3, alive, 480 days
6.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
6.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
6.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
4.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
257
Tumor
1.0
1013
Tumor
0.8
1025
Tumor
0.8
413
Tumor
0.8
911
Tumor
0.8
1027
Tumor
0.7
863
Tumor
0.7
357
Tumor
0.7
917
Tumor
0.7
285
Tumor
0.6
393
Tumor
0.6
445
Tumor
0.6
427
Tumor
0.6
743
Tumor
0.6
461
Tumor
0.6
487
Tumor
0.6
685
Tumor
0.6
527
Tumor
0.6
557
Tumor
0.6
983
Tumor
0.6
428
Normal
0.5
813
Tumor
0.5
385
Tumor
0.5
727
Tumor
0.5
665
Tumor
0.5
195
Tumor
0.5
463
Tumor
0.5
713
Tumor
0.5
814
Normal
0.5
627
Tumor
0.5
745
Tumor
0.5
112
Tumor
0.4
365
Tumor
0.4
227
Tumor
0.4
661
Tumor
0.4
262
Normal
0.4
351
Tumor
0.4
755
Tumor
0.4
615
Tumor
0.4
923
Tumor
0.4
145
Tumor
0.4
313
Tumor
0.4
981
Tumor
0.4
125
Tumor
0.4
223
Tumor
0.4
873
Tumor
0.4
451
Tumor
0.4
861
Tumor
0.4
137
Tumor
0.4
481
Tumor
0.4
865
Tumor
0.4
617
Tumor
0.3
141
Tumor
0.3
641
Tumor
0.3
851
Tumor
0.3
422
Normal
0.3
217
Tumor
0.3
113
Tumor
0.3
268
Normal
0.3
526
Normal
0.3
477
Tumor
0.3
953
Tumor
0.3
353
Tumor
0.3
395
Tumor
0.3
471
Tumor
0.3
648
Normal
0.3
515
Tumor
0.3
533
Tumor
0.3
635
Tumor
0.3
414
Normal
0.3
857
Tumor
0.3
314
Normal
0.3
862
Normal
0.3
261
Tumor
0.3
964
Normal
0.3
423
Tumor
0.3
967
Tumor
0.3
913
Tumor
0.3
258
Normal
0.3
426
Normal
0.2
523
Tumor
0.2
777
Tumor
0.2
867
Tumor
0.2
482
Normal
0.2
188
Normal
0.2
1014
Normal
0.2
467
Tumor
0.2
472
Normal
0.2
968
Normal
0.2
724
Normal
0.2
267
Tumor
0.2
616
Normal
0.2
231
Tumor
0.2
221
Tumor
0.2
868
Normal
0.2
435
Tumor
0.2
883
Tumor
0.2
187
Tumor
0.2
286
Normal
0.2
362
Normal
0.2
636
Normal
0.2
514
Normal
0.2
664
Normal
0.2
162
Normal
0.2
786
Normal
0.2
1043
Tumor
0.2
816
Normal
0.2
982
Normal
0.2
421
Tumor
0.2
877
Tumor
0.2
191
Tumor
0.2
271
Tumor
0.2
958
Normal
0.2
966
Normal
0.2
756
Normal
0.2
696
Normal
0.2
1015
Tumor
0.2
218
Normal
0.2
436
Normal
0.2
558
Normal
0.2
222
Normal
0.2
354
Normal
0.2
232
Normal
0.2
411
Tumor
0.2
978
Normal
0.2
135
Tumor
0.2
963
Tumor
0.2
858
Normal
0.1
383
Tumor
0.1
375
Tumor
0.1
497
Tumor
0.1
938
Normal
0.1
866
Normal
0.1
358
Normal
0.1
447
Tumor
0.1
666
Normal
0.1
518
Normal
0.1
332
Normal
0.1
128
Normal
0.1
424
Normal
0.1
1041
Tumor
0.1
874
Normal
0.1
1046
Normal
0.1
361
Tumor
0.1
391
Tumor
0.1
553
Tumor
0.1
327
Tumor
0.1
728
Normal
0.1
528
Normal
0.1
824
Normal
0.1
111
Normal
0.1
196
Normal
0.1
462
Normal
0.1
721
Tumor
0.1
328
Normal
0.1
1045
Tumor
0.1
943
Tumor
0.1
394
Normal
0.1
662
Normal
0.1
431
Tumor
0.1
131
Tumor
0.1
815
Tumor
0.1
564
Normal
0.1
778
Normal
0.1
1016
Normal
0.1
392
Normal
0.1
464
Normal
0.1
356
Normal
0.1
563
Tumor
0.1
474
Normal
0.1
955
Tumor
0.1
297
Tumor
0.1
396
Normal
0.1
737
Tumor
0.1
446
Normal
0.1
161
Tumor
0.1
671
Tumor
0.1
455
Tumor
0.1
283
Tumor
0.1
211
Tumor
0.1
741
Tumor
0.1
714
Normal
0.1
433
Tumor
0.1
148
Normal
0.1
817
Tumor
0.1
513
Tumor
0.1
864
Normal
0.1
342
Normal
0.1
355
Tumor
0.1
363
Tumor
0.1
272
Normal
0.1
618
Normal
0.1
368
Normal
0.1
277
Tumor
0.1
1031
Tumor
0.1
534
Normal
0.1
944
Normal
0.1
432
Normal
0.0
412
Normal
0.0
628
Normal
0.0
642
Normal
0.0
388
Normal
0.0
818
Normal
0.0
387
Tumor
0.0
852
Normal
0.0
738
Normal
0.0
574
Normal
0.0
114
Normal
0.0
884
Normal
0.0
228
Normal
0.0
344
Normal
0.0
742
Normal
0.0
984
Normal
0.0
298
Normal
0.0
284
Normal
0.0
881
Tumor
0.0
554
Normal
0.0
352
Normal
0.0
722
Normal
0.0
212
Normal
0.0
366
Normal
0.0
952
Normal
0.0
126
Normal
0.0
695
Tumor
0.0
723
Tumor
0.0
312
Normal
0.0
975
Tumor
0.0
468
Normal
0.0
686
Normal
0.0
172
Normal
0.0
278
Normal
0.0
214
Normal
0.0
715
Tumor
0.0
976
Normal
0.0
572
Normal
0.0
434
Normal
0.0
443
Tumor
0.0
647
Tumor
0.0
567
Tumor
0.0
376
Normal
0.0
147
Tumor
0.0
524
Normal
0.0
386
Normal
0.0
384
Normal
0.0
746
Normal
0.0
491
Tumor
0.0
918
Normal
0.0
466
Normal
0.0
1028
Normal
0.0
1032
Normal
0.0
716
Normal
0.0
452
Normal
0.0
132
Normal
0.0
1022
Normal
-0.1
546
Normal
-0.1
672
Normal
-0.1
922
Normal
-0.1
1042
Normal
-0.1
926
Normal
-0.1
1026
Normal
-0.1
127
Tumor
-0.1
823
Tumor
-0.1
136
Normal
-0.1
697
Tumor
-0.1
568
Normal
-0.1
124
Normal
-0.1
492
Normal
-0.1
493
Tumor
-0.1
882
Normal
-0.1
965
Tumor
-0.1
956
Normal
-0.1
535
Tumor
-0.1
142
Normal
-0.1
954
Normal
-0.1
516
Normal
-0.1
415
Tumor
-0.1
488
Normal
-0.1
977
Tumor
-0.1
456
Normal
-0.1
484
Normal
-0.1
123
Tumor
-0.1
914
Normal
-0.1
536
Normal
-0.1
663
Tumor
-0.1
224
Normal
-0.1
494
Normal
-0.1
138
Normal
-0.2
1044
Normal
-0.2
311
Tumor
-0.2
343
Tumor
-0.2
698
Normal
-0.2
213
Tumor
-0.2
916
Normal
-0.2
444
Normal
-0.2
416
Normal
-0.2
744
Normal
-0.2
517
Tumor
-0.2
1021
Tumor
-0.2
878
Normal
-0.2
545
Tumor
-0.2
538
Normal
-0.2
146
Normal
-0.2
924
Normal
-0.2
478
Normal
-0.2
525
Tumor
-0.2
912
Normal
-0.2
915
Tumor
-0.2
921
Tumor
-0.2
331
Tumor
-0.2
186
Normal
-0.2
957
Tumor
-0.2
448
Normal
-0.3
364
Normal
-0.3
473
Tumor
-0.3
192
Normal
-0.3
937
Tumor
-0.3
341
Tumor
-0.3
573
Tumor
-0.3
537
Tumor
-0.3
498
Normal
-0.3
171
Tumor
-0.4
785
Tumor
-0.4
367
Tumor
-0.4
951
Tumor
-0.5
185
Tumor
-0.5
571
Tumor
-0.6
425
Tumor
-0.6
465
Tumor
-0.6
483
Tumor
-0.6
925
Tumor
-0.8
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
