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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMIM4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
43.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
109.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
109.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
87.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
86.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
76.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
72.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
72.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
71.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
67.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
64.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
63.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
63.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
59.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
58.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
58.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
57.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
55.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
50.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
49.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
49.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
48.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
47.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
46.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
46.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
44.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
44.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
44.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
43.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
43.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
43.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
43.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
41.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
39.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
38.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
36.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
36.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
36.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
34.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
33.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
33.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
32.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
31.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
31.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
29.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
29.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
28.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
28.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
27.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
27.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
26.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
26.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
24.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
24.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
23.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
21.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
21.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
20.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
19.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
17.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
15.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
13.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
12.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
10.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMIM4 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
117.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
67.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
63.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
60.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
59.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
57.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
56.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
55.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
54.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
53.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
53.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
52.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
51.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
50.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
46.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
43.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
43.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
42.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
40.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
39.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
38.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
36.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
35.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
34.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
32.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
32.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
32.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
32.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
32.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
31.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
31.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
30.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
30.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
29.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
29.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
28.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
28.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
27.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
26.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
26.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
26.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
25.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
25.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
25.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
25.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
25.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
25.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
24.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
24.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
24.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
24.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
24.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
23.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
23.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
23.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
23.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
23.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
23.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
23.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
23.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
23.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
23.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
22.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
22.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
22.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
22.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
22.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
22.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
22.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
22.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
21.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
21.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
21.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
21.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
21.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
21.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
21.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
21.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
21.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
21.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
21.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
20.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
20.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
20.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
20.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
20.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
20.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
20.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
20.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
20.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
20.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
20.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
20.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
20.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
20.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
19.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
19.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
19.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
19.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
19.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
19.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
19.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
19.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
19.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
19.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
19.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
19.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
19.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
19.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
19.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
19.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
18.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
18.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
18.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
18.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
18.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
18.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
18.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
18.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
18.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
18.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
18.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
18.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
18.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
18.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
18.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
18.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
18.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
18.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
18.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
18.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
18.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
18.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
18.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
18.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
18.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
18.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
18.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
17.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
17.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
17.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
17.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
17.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
17.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
17.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
17.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
17.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
17.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
17.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
17.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
17.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
17.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
17.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
17.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
17.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
17.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
17.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
17.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
17.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
17.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
16.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
16.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
16.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
16.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
16.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
16.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
16.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
16.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
16.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
16.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
16.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
16.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
16.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
16.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
16.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
16.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
16.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
16.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
16.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
16.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
16.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
16.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
16.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
16.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
16.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
16.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
16.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
16.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
16.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
16.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
16.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
16.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
15.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
15.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
15.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
15.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
15.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
15.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
15.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
15.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
15.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
15.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
15.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
15.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
15.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
15.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
15.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
15.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
15.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
15.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
15.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
15.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
15.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
15.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
15.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
15.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
15.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
15.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
15.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
15.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
15.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
15.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
15.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
14.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
14.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
14.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
14.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
14.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
14.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
14.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
14.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
14.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
14.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
14.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
14.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
14.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
14.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
14.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
14.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
14.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
14.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
14.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
14.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
14.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
14.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
14.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
14.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
14.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
14.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
14.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
14.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
14.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
14.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
14.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
14.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
14.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
14.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
14.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
14.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
14.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
14.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
13.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
13.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
13.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
13.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
13.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
13.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
13.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
13.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
13.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
13.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
13.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
13.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
13.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
13.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
13.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
13.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
13.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
13.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
13.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
13.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
13.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
13.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
13.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
13.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
13.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
13.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
13.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
13.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
13.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
13.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
13.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
13.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
13.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
13.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
13.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
13.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
13.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
13.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
13.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
13.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
13.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
13.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
13.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
13.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
13.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
13.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
13.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
13.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
13.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
13.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
13.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
13.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
12.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
12.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
12.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
12.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
12.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
12.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
12.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
12.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
12.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
12.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
12.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
12.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
12.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
12.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
12.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
12.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
12.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
12.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
12.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
12.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
12.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
12.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
12.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
12.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
12.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
12.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
12.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
12.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
12.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
12.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
12.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
12.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
12.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
12.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
12.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
12.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
12.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
12.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
12.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
11.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
11.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
11.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
11.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
11.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
11.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
11.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
11.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
11.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
11.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
11.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
11.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
11.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
11.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
11.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
11.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
11.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
11.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
11.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
11.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
11.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
11.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
11.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
11.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
11.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
11.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
11.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
11.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
11.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
11.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
11.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
11.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
11.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
11.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
11.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
11.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
11.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
11.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
10.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
10.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
10.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
10.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
10.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
10.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
10.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
10.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
10.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
10.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
10.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
10.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
10.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
10.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
10.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
10.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
10.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
10.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
10.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
10.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
10.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
10.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
10.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
10.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
10.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
10.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
10.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
10.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
10.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
10.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
10.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
10.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
10.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
10.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
10.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
10.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
10.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
10.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
10.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
10.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
10.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
10.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
9.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
9.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
9.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
9.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
9.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
9.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
9.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
9.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
9.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
9.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
9.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
9.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
9.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
9.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
9.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
9.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
9.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
9.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
9.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
9.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
9.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
9.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
9.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
9.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
9.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
9.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
9.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
9.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
9.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
9.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
9.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
9.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
9.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
9.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
8.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
8.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
8.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
8.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
8.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
8.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
8.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
8.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
8.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
8.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
8.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
8.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
8.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
8.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
8.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
8.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
8.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
8.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
8.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
8.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
8.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
8.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
8.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
8.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
7.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
7.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
7.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
7.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
7.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
7.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
7.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
7.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
7.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
7.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
7.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
7.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
7.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
7.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
6.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
6.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
6.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
5.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
5.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
5.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
5.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
4.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
3.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
2.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMIM4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
69.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
38.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
36.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
34.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
31.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
30.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
29.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
28.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
23.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
23.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
22.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
22.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
22.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
22.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
22.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
22.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
21.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
21.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
21.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
21.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
20.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
20.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
20.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
19.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
19.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
19.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
18.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
18.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
18.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
18.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
17.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
17.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
17.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
17.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
17.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
16.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
16.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
16.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
16.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
16.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
16.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
16.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
15.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
15.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
15.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
15.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
15.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
14.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
14.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
14.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
14.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
14.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
13.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
13.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
13.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
13.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
13.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
13.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
13.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
12.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
12.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
12.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
12.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
12.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
11.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
11.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
11.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
11.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
11.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
11.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
11.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
11.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
11.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
11.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
10.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
10.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
10.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
10.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
10.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
9.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
9.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
9.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
8.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
8.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
8.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
8.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
8.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
8.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
8.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
8.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
8.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
8.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
7.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
7.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
7.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
7.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMIM4 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
36.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
205.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
157.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
139.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
103.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
101.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
98.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
92.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
90.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
88.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
87.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
86.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
80.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
80.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
79.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
79.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
79.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
76.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
76.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
75.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
71.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
70.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
70.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
69.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
68.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
67.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
67.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
65.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
65.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
64.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
63.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
63.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
61.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
61.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
60.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
60.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
60.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
60.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
60.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
60.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
59.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
59.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
59.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
58.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
58.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
58.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
57.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
57.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
56.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
55.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
55.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
55.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
55.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
54.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
53.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
53.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
53.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
52.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
52.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
52.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
50.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
50.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
50.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
48.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
48.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
47.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
47.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
46.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
46.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
46.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
46.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
45.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
45.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
45.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
44.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
44.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
44.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
43.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
43.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
43.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
43.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
43.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
43.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
43.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
42.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
42.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
42.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
42.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
41.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
41.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
41.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
39.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
39.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
39.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
39.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
39.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
38.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
38.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
38.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
38.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
38.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
38.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
38.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
37.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
37.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
37.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
36.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
36.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
36.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
36.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
36.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
36.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
36.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
35.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
35.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
35.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
35.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
34.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
34.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
34.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
34.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
34.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
34.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
34.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
34.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
34.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
34.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
33.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
33.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
32.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
32.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
32.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
32.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
32.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
32.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
31.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
31.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
31.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
31.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
31.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
31.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
31.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
31.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
31.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
31.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
31.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
30.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
30.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
30.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
30.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
29.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
29.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
29.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
29.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
29.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
29.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
29.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
29.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
29.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
28.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
28.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
28.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
28.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
28.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
28.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
28.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
28.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
28.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
27.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
27.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
27.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
27.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
27.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
27.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
27.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
27.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
27.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
27.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
26.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
26.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
26.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
26.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
26.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
26.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
26.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
25.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
25.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
25.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
25.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
24.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
24.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
24.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
24.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
24.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
24.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
23.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
23.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
23.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
23.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
23.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
23.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
23.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
23.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
23.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
22.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
22.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
22.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
22.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
22.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
22.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
22.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
21.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
21.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
21.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
21.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
21.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
20.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
20.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
20.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
20.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
20.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
20.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
19.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
19.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
19.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
19.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
19.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
19.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
18.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
18.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
18.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
18.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
17.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
17.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
17.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
17.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
17.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
16.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
16.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
16.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
16.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
16.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
16.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
15.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
15.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
15.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
14.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
14.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
14.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
14.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
14.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
14.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
14.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
13.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
13.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
13.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
13.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
13.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
12.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
12.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
12.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
12.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
11.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
11.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
10.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
10.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
8.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
8.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
7.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
7.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
7.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
7.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
6.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
5.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
5.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
4.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
4.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
4.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
4.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
3.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
2.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
1.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
