HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:71.6 nTPM
HPA Brain:48.0 nTPM
GTEx:71.6 nTPM
FANTOM5:104.7 Scaled Tags Per Million
Pig:110.1 nTPM
Mouse:76.0 nTPM
Allen mouse:7.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023015Antibody HPA052395
Glial cells Not detectedNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 48.0
Sample id Sample description nTPM
Hippocampus
nTPM: 40.1
1898 Male, age 80, left hemisphere 56.4
2529 Female, age 94, left hemisphere 41.3
2621 Female, age 67, right hemisphere 40.4
1855 Male, age 76, left hemisphere 38.9
2148 Female, age 91, left hemisphere 33.3
1911 Female, age 85, right hemisphere 30.6
Dentate gyrus
nTPM: 35.3
1927 Female, age 91, both hemispheres 41.0
2010 Male, age 76, both hemispheres 39.0
2246 Female, age 85, both hemispheres 36.4
2528 Male, age 74, both hemispheres 36.2
2530 Female, age 94, left hemisphere 29.7
2531 Female, age 67, both hemispheres 29.6
Entorhinal gyrus
nTPM: 35.5
1938 Female, age 85, left hemisphere 43.6
2764 Male, age 80, right hemisphere 37.9
1787 Male, age 76, left hemisphere 35.6
2117 Female, age 91, right hemisphere 33.4
2686 Male, age 75, right hemisphere 32.5
2613 Female, age 94, left hemisphere 29.6
Hippocampus, CA1
nTPM: 42.6
2749 Male, age 80, left hemisphere 66.3
1873 Female, age 85, both hemispheres 43.1
2527 Male, age 74, both hemispheres 39.4
2045 Male, age 76, both hemispheres 36.0
2082 Female, age 91, right hemisphere 28.0
Hippocampus, CA2
nTPM: 40.1
1963 Male, age 80, left hemisphere 54.0
1892 Male, age 76, both hemispheres 53.9
1940 Female, age 85, left hemisphere 38.1
2249 Male, age 74, both hemispheres 34.9
2437 Female, age 94, left hemisphere 31.7
2113 Female, age 91, right hemisphere 27.7
Hippocampus, CA3
nTPM: 42.3
2137 Male, age 80, left hemisphere 61.0
1867 Male, age 76, both hemispheres 47.3
2620 Female, age 94, left hemisphere 41.7
2436 Male, age 74, both hemispheres 41.1
1891 Female, age 85, both hemispheres 36.3
2861 Female, age 67, both hemispheres 26.3
Parahippocampal cortex
nTPM: 37.2
1850 Male, age 80, both hemispheres 53.6
2245 Female, age 91, both hemispheres 41.6
1933 Female, age 85, both hemispheres 40.1
1990 Female, age 91, right hemisphere 40.0
2532 Female, age 72, left hemisphere 38.6
2250 Female, age 67, right hemisphere 34.9
2018 Male, age 76, both hemispheres 34.3
2693 Female, age 94, both hemispheres 32.7
2622 Female, age 67, right hemisphere 30.2
2692 Male, age 74, both hemispheres 26.5
Perirhinal gyrus
nTPM: 48.0
1794 Male, age 80, right hemisphere 58.2
1847 Female, age 91, left hemisphere 56.2
1841 Female, age 85, right hemisphere 46.1
2848 Male, age 76, right hemisphere 40.8
2521 Female, age 94, right hemisphere 38.7
Subiculum
nTPM: 35.9
1901 Male, age 80, both hemispheres 44.9
1977 Female, age 85, both hemispheres 39.7
2438 Female, age 94, left hemisphere 38.0
2042 Male, age 76, both hemispheres 33.1
2619 Male, age 74, both hemispheres 32.6
2729 Female, age 91, right hemisphere 26.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 71.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 71.6
Samples: 197

Max nTPM: 179.1
Min nTPM: 35.0
Std nTPM: 25.5
Median nTPM: 68.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 179.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 167.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 141.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 136.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 133.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 132.8
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 131.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 131.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 128.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 125.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 125.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 104.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 104.7
FF:10169-103B7 60 years, female 111.1
FF:10153-102I9 76 years, female 98.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 110.1
Pig sample Sample description nTPM
Subiculum
nTPM: 90.8
Samples: 4

Max nTPM: 115.2
Min nTPM: 78.7
Sample A Female 115.2
Sample B Female 87.6
Sample C Male 78.7
Sample D Male 81.7
Dorsal hippocampus
nTPM: 110.1
Samples: 4

Max nTPM: 152.6
Min nTPM: 75.9
Sample A Female 152.6
Sample B Female 96.2
Sample C Male 115.5
Sample D Male 75.9
Entorhinal cortex
nTPM: 88.2
Samples: 4

Max nTPM: 103.4
Min nTPM: 80.4
Sample A Female 87.5
Sample B Female 103.4
Sample C Male 80.4
Sample D Male 81.5
Ventral hippocampus
nTPM: 93.9
Samples: 4

Max nTPM: 107.3
Min nTPM: 73.4
Sample A Female 102.4
Sample B Female 73.4
Sample C Male 92.5
Sample D Male 107.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 76.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 74.8
Samples: 4

Max nTPM: 79.6
Min nTPM: 71.3
Sample A Male 71.3
Sample B Male 76.0
Sample C Female 72.1
Sample D Female 79.6
Hippocampal formation
nTPM: 76.0
Samples: 4

Max nTPM: 81.3
Min nTPM: 67.9
Sample A Male 78.7
Sample B Male 76.0
Sample C Female 81.3
Sample D Female 67.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.4
68795402 Antisense, RP_041116_02_H04, Mouse strain C57BL/6J (56 days, male) 7.4

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