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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DDIT4 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
59.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
471.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
418.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
369.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
335.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
317.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
310.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
298.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
247.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
234.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
230.7
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
230.6
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
217.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
210.9
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
209.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
203.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
201.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
200.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
199.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
197.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
192.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
178.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
172.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
172.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
169.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
167.0
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
154.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
154.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
146.4
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
146.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
142.6
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
141.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
141.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
136.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
135.1
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
129.9
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
129.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
129.3
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
129.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
129.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
124.9
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
124.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
121.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
121.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
119.6
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
119.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
117.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
109.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
108.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
107.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
106.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
103.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
99.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
99.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
98.3
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
98.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
95.6
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
91.5
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
90.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
90.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
89.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
89.1
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
87.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
87.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
86.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
85.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
85.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
85.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
84.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
84.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
84.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
83.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
83.3
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
83.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
83.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
82.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
81.4
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
81.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
80.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
79.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
78.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
78.6
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
77.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
77.7
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
77.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
77.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
76.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
74.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
73.3
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
73.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
72.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
72.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
71.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
71.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
71.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
71.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
70.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
70.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
69.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
68.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
68.6
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
68.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
67.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
66.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
66.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
65.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
65.5
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
65.3
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
65.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
64.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
64.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
64.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
64.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
63.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
63.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
63.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
63.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
61.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
61.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
60.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
60.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
60.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
58.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
58.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
58.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
57.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
56.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
56.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
55.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
55.7
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
55.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
55.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
55.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
55.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
54.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
54.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
54.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
52.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
52.5
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
52.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
52.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
51.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
51.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
50.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
50.9
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
50.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
49.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
49.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
49.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
48.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
48.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
48.4
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
48.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
48.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
47.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
47.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
47.6
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
47.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
45.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
45.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
45.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
45.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
44.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
44.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
44.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
44.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
42.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
42.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
42.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
42.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
42.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
41.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
40.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
40.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
40.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
40.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
39.9
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
39.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
39.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
38.9
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
38.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
38.7
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
38.2
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
38.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
38.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
37.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
36.7
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
36.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
36.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
36.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
35.5
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
35.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
34.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
34.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
34.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
33.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
33.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
33.4
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
33.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
33.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
33.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
32.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
32.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
32.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
32.7
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
32.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
31.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
31.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
31.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
31.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
31.4
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
30.7
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
30.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
30.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
30.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
30.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
30.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
29.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
29.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
29.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
28.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
28.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
28.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
28.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
28.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
27.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
27.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
27.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
27.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
27.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
27.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
27.1
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
26.3
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
25.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
25.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
25.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
25.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
25.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
25.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
24.7
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
24.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
24.4
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
24.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
24.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
24.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
23.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
23.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
23.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
23.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
23.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
23.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
23.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
23.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
22.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
22.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
22.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
22.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
22.4
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
22.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
22.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
21.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
21.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
21.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
21.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
21.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
21.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
21.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
21.0
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
20.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
19.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
19.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
19.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
19.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
19.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
19.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
19.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
19.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
19.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
19.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
18.9
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
18.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
18.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
18.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
18.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
18.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
18.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
18.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
18.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
17.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
17.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
17.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
17.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
17.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
17.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
17.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
16.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
16.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
16.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
16.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
16.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
16.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
16.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
16.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
16.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
16.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
14.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
14.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
14.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
14.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
14.4
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
13.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
13.9
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
13.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
13.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
13.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
13.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
12.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
12.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
12.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
12.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
12.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
12.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
12.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
11.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
11.8
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
11.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
11.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
10.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
10.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
10.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
10.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
10.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
9.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
9.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
9.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
9.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
8.9
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
8.9
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
8.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
8.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
7.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
7.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
7.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
7.6
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
7.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
7.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
6.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
6.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
6.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
6.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
6.2
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
5.8
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
5.6
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
5.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
4.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
4.6
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
4.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
4.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
4.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
3.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
2.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DDIT4 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
64.7
Number of samples
231
Samples
Sample
Description
TPM
DO45245
0 years, female, NA, stage:2, dead, 240 days
910.6
DO45285
0 years, male, NA, stage:3, alive, 480 days
712.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
594.4
DO45297
0 years, female, NA, stage:4, dead, 1260 days
517.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
432.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
368.4
DO45211
0 years, male, NA, stage:3, alive, 240 days
306.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
281.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
281.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
274.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
264.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
264.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
253.8
DO45183
0 years, female, NA, stage:2, dead, 570 days
209.1
DO48747
0 years, male, NA, stage:3, alive, 540 days
198.7
DO45113
0 years, male, NA, stage:3, alive, 1560 days
193.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
191.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
189.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
188.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
171.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
161.7
DO45235
0 years, female, NA, stage:1, alive, 900 days
157.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
156.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
152.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
151.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
135.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
134.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
134.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
131.7
DO45301
0 years, male, NA, stage:2, dead, 1440 days
131.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
126.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
124.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
119.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
119.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
119.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
117.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
109.9
DO45131
0 years, male, NA, stage:4, dead, 360 days
105.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
99.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
98.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
87.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
85.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
85.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
82.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
80.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
78.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
75.7
DO45263
0 years, male, NA, stage:3, dead, 270 days
75.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
75.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
75.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
74.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
74.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
74.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
73.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
73.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
72.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
70.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
68.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
68.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
67.7
DO48743
0 years, female, NA, stage:2, alive, 570 days
67.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
66.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
64.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
64.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
63.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
60.7
DO48700
0 years, female, NA, stage:2, alive, 810 days
59.4
DO50816
0 years, male, NA, stage:2, alive, 390 days
59.3
DO50817
0 years, male, NA, stage:2, alive, 390 days
58.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
57.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
57.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
54.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
52.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
51.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
48.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
47.9
DO45103
0 years, male, NA, stage:3, alive, 450 days
47.9
DO23535
0 years, male, NA, stage:1, alive, 960 days
47.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
44.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
44.3
DO45209
0 years, male, NA, stage:4, alive, 1350 days
44.0
DO45303
0 years, female, NA, stage:3, alive, 990 days
43.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
41.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
41.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
41.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
41.1
DO23542
0 years, male, NA, stage:3, alive, 960 days
40.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
40.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
38.8
DO48720
0 years, female, NA, stage:2, alive, 570 days
38.3
DO23518
0 years, male, NA, stage:2, alive, 1320 days
38.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
37.7
DO48723
0 years, male, NA, stage:1, alive, 600 days
37.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
37.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
36.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
36.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
36.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
35.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
35.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
35.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
35.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
34.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
34.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
33.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
33.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
32.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
32.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
32.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
32.2
DO45233
0 years, male, NA, stage:3, alive, 900 days
31.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
30.3
DO45213
0 years, male, NA, stage:1, alive, 1200 days
29.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
28.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
28.7
DO50813
0 years, male, NA, stage:2, alive, 420 days
28.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
27.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
26.7
DO45095
0 years, male, NA, stage:2, alive, 1620 days
26.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
26.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
25.6
DO45159
0 years, male, NA, stage:3, alive, 1470 days
25.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
25.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
25.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
25.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
25.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
24.8
DO45273
0 years, male, NA, stage:2, alive, 480 days
24.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
23.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
23.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
23.5
DO45121
0 years, male, NA, stage:3, alive, 1530 days
23.2
DO48732
0 years, male, NA, stage:3, alive, 630 days
23.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
23.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
22.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
22.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
22.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
22.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
21.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
21.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
21.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
20.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
20.3
DO23551
0 years, male, NA, stage:3, dead, 150 days
20.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
20.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
19.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
19.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
19.8
DO45137
0 years, male, NA, stage:1, alive, 1320 days
19.7
DO23533
0 years, male, NA, stage:2, alive, 900 days
18.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
18.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
17.8
DO45177
0 years, female, NA, stage:3, alive, 1260 days
17.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
17.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
17.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
17.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
17.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
16.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
16.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
16.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
16.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
16.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
15.7
DO45215
0 years, male, NA, stage:2, alive, 1170 days
15.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
15.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
15.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
15.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
14.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
14.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
14.3
DO23511
0 years, female, NA, stage:3, dead, 180 days
14.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
14.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
13.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
13.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
13.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
12.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
12.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
11.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
11.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
11.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
11.8
DO45237
0 years, male, NA, stage:2, alive, 900 days
11.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
11.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
11.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
11.5
DO50859
0 years, male, NA, stage:2, alive, 180 days
11.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
11.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
11.1
DO45265
0 years, male, NA, stage:3, alive, 1020 days
11.0
DO45189
0 years, female, NA, stage:2, alive, 1200 days
10.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
10.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
10.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
10.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
10.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
10.3
DO50791
0 years, female, NA, stage:1, dead, 480 days
10.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
10.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
9.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
9.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
9.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
9.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
9.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
9.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
8.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
8.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
8.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
8.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
8.4
DO48746
0 years, male, NA, stage:3, alive, 570 days
8.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
8.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
8.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
7.7
DO48757
0 years, female, NA, stage:3, alive, 480 days
7.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
7.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
7.3
DO23534
0 years, male, NA, stage:2, alive, 840 days
7.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
7.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
6.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
6.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
6.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
5.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
5.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
5.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
5.6
DO45193
0 years, female, NA, stage:4, dead, 120 days
5.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
4.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
4.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
4.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
4.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
4.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
3.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
1.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
231
Tumor
N/A
352
Normal
N/A
473
Tumor
N/A
111
Normal
N/A
232
Normal
N/A
353
Tumor
N/A
474
Normal
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
483
Tumor
N/A
363
Tumor
N/A
484
Normal
N/A
364
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
487
Tumor
N/A
125
Tumor
N/A
367
Tumor
N/A
488
Normal
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
131
Tumor
N/A
494
Normal
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
497
Tumor
N/A
135
Tumor
N/A
498
Normal
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
937
Tumor
N/A
817
Tumor
N/A
938
Normal
N/A
818
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
145
Tumor
N/A
387
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
943
Tumor
N/A
823
Tumor
N/A
944
Normal
N/A
824
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
1016
Normal
N/A
278
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
951
Tumor
N/A
1013
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
713
Tumor
N/A
955
Tumor
N/A
714
Normal
N/A
956
Normal
N/A
715
Tumor
N/A
957
Tumor
N/A
716
Normal
N/A
958
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
721
Tumor
N/A
963
Tumor
N/A
722
Normal
N/A
964
Normal
N/A
723
Tumor
N/A
965
Tumor
N/A
724
Normal
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
977
Tumor
N/A
615
Tumor
N/A
857
Tumor
N/A
978
Normal
N/A
616
Normal
N/A
737
Tumor
N/A
858
Normal
N/A
617
Tumor
N/A
738
Normal
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
981
Tumor
N/A
861
Tumor
N/A
982
Normal
N/A
741
Tumor
N/A
862
Normal
N/A
983
Tumor
N/A
742
Normal
N/A
863
Tumor
N/A
984
Normal
N/A
1046
Normal
N/A
743
Tumor
N/A
864
Normal
N/A
1045
Tumor
N/A
744
Normal
N/A
865
Tumor
N/A
745
Tumor
N/A
866
Normal
N/A
746
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
513
Tumor
N/A
755
Tumor
N/A
514
Normal
N/A
635
Tumor
N/A
756
Normal
N/A
877
Tumor
N/A
515
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
641
Tumor
N/A
883
Tumor
N/A
642
Normal
N/A
884
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
647
Tumor
N/A
527
Tumor
N/A
648
Normal
N/A
528
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
533
Tumor
N/A
413
Tumor
N/A
534
Normal
N/A
414
Normal
N/A
535
Tumor
N/A
777
Tumor
N/A
415
Tumor
N/A
536
Normal
N/A
778
Normal
N/A
416
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
421
Tumor
N/A
663
Tumor
N/A
422
Normal
N/A
664
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
665
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
545
Tumor
N/A
666
Normal
N/A
425
Tumor
N/A
546
Normal
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
431
Tumor
N/A
311
Tumor
N/A
432
Normal
N/A
553
Tumor
N/A
312
Normal
N/A
433
Tumor
N/A
554
Normal
N/A
313
Tumor
N/A
434
Normal
N/A
314
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
443
Tumor
N/A
564
Normal
N/A
685
Tumor
N/A
444
Normal
N/A
686
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
567
Tumor
N/A
447
Tumor
N/A
568
Normal
N/A
327
Tumor
N/A
448
Normal
N/A
328
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
331
Tumor
N/A
452
Normal
N/A
573
Tumor
N/A
211
Tumor
N/A
332
Normal
N/A
574
Normal
N/A
695
Tumor
N/A
212
Normal
N/A
696
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
342
Normal
N/A
463
Tumor
N/A
222
Normal
N/A
343
Tumor
N/A
464
Normal
N/A
223
Tumor
N/A
344
Normal
N/A
465
Tumor
N/A
224
Normal
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.