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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAPK1IP1L is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
54.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
46.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
42.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
42.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
40.6
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
39.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
38.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
37.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
36.8
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
35.3
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
34.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
33.9
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
33.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
31.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
29.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
29.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
28.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
27.1
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
26.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
26.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
25.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
25.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
25.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
24.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
24.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
24.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
23.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
23.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
23.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
23.6
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
23.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
23.4
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
23.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
23.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
23.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
22.9
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
22.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
22.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
22.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
22.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
22.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
22.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
22.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
22.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
21.8
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
21.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
21.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
21.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
21.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
21.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
21.4
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
21.4
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
21.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
21.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
21.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
21.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
21.0
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
21.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
20.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
20.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
20.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
20.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
20.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
20.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
20.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
19.8
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
19.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
19.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
19.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
19.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
19.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
19.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
19.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
18.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
18.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
18.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
18.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
18.3
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
18.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
18.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
18.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
18.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
18.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
18.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
17.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
17.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
17.9
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
17.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
17.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
17.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
17.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
17.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
17.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
17.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
17.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
17.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
17.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
17.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
17.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
17.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
17.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
16.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
16.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
16.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
16.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
16.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
16.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
16.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
16.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
15.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
15.9
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
15.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
15.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
15.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
15.7
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
15.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
15.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
15.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
15.6
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
15.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
15.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
15.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
15.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
15.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
15.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
15.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
15.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
15.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
15.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
15.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
15.2
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
15.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
15.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
15.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
15.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
15.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
15.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
14.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
14.8
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
14.8
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
14.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
14.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
14.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
14.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
14.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
14.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
14.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
14.6
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
14.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
14.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
14.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
14.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
14.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
14.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
14.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
14.4
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
14.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
14.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
14.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
14.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
14.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
14.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
14.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
14.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
14.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.0
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
14.0
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
14.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
13.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
13.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
13.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
13.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
13.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
13.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
13.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
13.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
13.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
13.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
13.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
13.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
13.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
13.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
13.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
13.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
13.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
13.4
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
13.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
13.3
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
13.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
13.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
13.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
13.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
13.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
13.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
13.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
13.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
12.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
12.9
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
12.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
12.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
12.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
12.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
12.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
12.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
12.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
12.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
12.6
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
12.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
12.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
12.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
12.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
12.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
12.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
12.3
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
12.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
12.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
12.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
12.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
12.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
12.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
12.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
12.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
11.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
11.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
11.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
11.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
11.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
11.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
11.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
11.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
11.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
11.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
11.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
11.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
11.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
11.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
11.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
11.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
11.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
11.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
11.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
11.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
11.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
11.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
11.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
11.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
11.1
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
11.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
11.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
11.0
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
11.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
10.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
10.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
10.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
10.7
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
10.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
10.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
10.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
10.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
10.4
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
10.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
10.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
10.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
10.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
10.3
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
10.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
10.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
10.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
10.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
10.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
10.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
10.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
10.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
10.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
10.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
10.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
10.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
9.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
9.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
9.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
9.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
9.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
9.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
9.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
9.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
9.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
9.6
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
9.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
9.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
9.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
9.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
9.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
9.5
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
9.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
9.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
9.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
9.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
9.1
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
9.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
9.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
9.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
9.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
9.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
8.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
8.8
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
8.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
8.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
8.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
8.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
8.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
8.3
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
8.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
8.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
8.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
8.2
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
8.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
8.1
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
8.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
8.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
8.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
8.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
7.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
7.9
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
7.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
7.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
7.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
7.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
7.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
7.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
7.2
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
7.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
7.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
7.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
7.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
6.9
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
6.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
6.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
6.9
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
6.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
6.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
6.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
6.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
6.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
6.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
6.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
6.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
5.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
5.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
5.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
5.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
5.4
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
5.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
5.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
5.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
5.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
5.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
4.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
4.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
4.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
4.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAPK1IP1L is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.9
Number of samples
231
Samples
Sample
Description
TPM
DO45297
0 years, female, NA, stage:4, dead, 1260 days
25.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
20.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
20.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
19.8
DO23513
0 years, male, NA, stage:3, alive, 1200 days
18.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
18.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
18.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
17.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
17.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
16.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
16.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
16.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
16.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
16.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
15.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
15.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
14.7
DO50798
0 years, male, NA, stage:3, dead, 30 days
14.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
14.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
14.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
14.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
14.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
14.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
13.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
13.7
DO50855
0 years, male, NA, stage:2, alive, 570 days
13.6
DO23539
0 years, male, NA, stage:1, alive, 1110 days
13.6
DO23525
0 years, male, NA, stage:4, alive, 1050 days
13.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
13.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
13.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
13.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
13.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
13.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
13.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
13.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
12.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
12.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
12.9
DO23537
0 years, male, NA, stage:2, dead, 900 days
12.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
12.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
12.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
12.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
12.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
12.7
DO45251
0 years, female, NA, stage:2, alive, 900 days
12.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
12.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
12.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
12.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
12.3
DO48719
0 years, male, NA, stage:2, alive, 690 days
12.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
12.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
12.2
DO45277
0 years, male, NA, stage:3, alive, 600 days
12.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
12.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
12.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
12.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
12.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
11.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
11.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
11.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
11.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
11.5
DO45161
0 years, male, NA, stage:2, dead, 540 days
11.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
11.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
11.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
11.4
DO45281
0 years, male, NA, stage:4, alive, 750 days
11.3
DO50791
0 years, female, NA, stage:1, dead, 480 days
11.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
11.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
11.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
11.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
10.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
10.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
10.9
DO45137
0 years, male, NA, stage:1, alive, 1320 days
10.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
10.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
10.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
10.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
10.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
10.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
10.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
10.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
10.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
10.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
10.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
10.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
10.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
10.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
10.3
DO48695
0 years, male, NA, stage:2, alive, 720 days
10.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
10.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
10.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
10.2
DO45121
0 years, male, NA, stage:3, alive, 1530 days
10.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
10.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
10.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
10.0
DO23543
0 years, male, NA, stage:2, alive, 1020 days
10.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
10.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
10.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
10.0
DO48697
0 years, female, NA, stage:2, dead, 810 days
10.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
10.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
10.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
9.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
9.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
9.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
9.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
9.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
9.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
9.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
9.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
9.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
9.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
9.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
9.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
9.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
9.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
9.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
9.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
9.3
DO50804
0 years, male, NA, stage:2, alive, 720 days
9.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
9.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
9.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
9.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
9.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
9.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
9.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
9.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
9.1
DO45129
0 years, male, NA, stage:3, alive, 1470 days
9.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
9.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
9.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
9.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
8.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
8.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
8.9
DO48736
0 years, female, NA, stage:1, alive, 600 days
8.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
8.9
DO45159
0 years, male, NA, stage:3, alive, 1470 days
8.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
8.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
8.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
8.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
8.6
DO50789
0 years, female, NA, stage:2, alive, 570 days
8.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
8.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
8.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
8.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
8.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
8.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
8.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
8.4
DO48677
0 years, male, NA, stage:3, alive, 1140 days
8.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
8.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
8.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
8.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
8.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
8.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
8.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
8.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
8.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
8.0
DO45153
0 years, female, NA, stage:2, alive, 1380 days
8.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
8.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
8.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
7.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
7.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
7.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
7.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
7.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
7.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
7.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
7.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
7.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
7.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
7.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
7.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
7.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
7.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
7.4
DO227643
0 years, male, NA, stage:2, alive, 1260 days
7.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
7.4
DO45219
0 years, male, NA, stage:2, alive, 1080 days
7.4
DO23517
0 years, male, NA, stage:2, alive, 1200 days
7.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
7.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
7.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
7.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
7.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
7.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
7.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
6.9
DO48730
0 years, female, NA, stage:2, alive, 630 days
6.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
6.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
6.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
6.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
6.8
DO45235
0 years, female, NA, stage:1, alive, 900 days
6.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
6.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
6.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
6.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
6.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
6.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
6.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
6.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
6.2
DO23527
0 years, male, NA, stage:1, alive, 1050 days
6.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
6.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
6.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
6.1
DO45091
0 years, male, NA, stage:2, dead, 1320 days
6.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
6.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
6.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
6.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
5.9
DO45149
0 years, female, NA, stage:2, alive, 1260 days
5.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
5.6
DO45115
0 years, male, NA, stage:2, alive, 840 days
5.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
5.3
DO45111
0 years, male, NA, stage:2, alive, 1590 days
5.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
5.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
5.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
5.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
5.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
5.0
DO45109
0 years, male, NA, stage:2, alive, 1590 days
5.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
4.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
4.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
4.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
4.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
3.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
2.2
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
737
Tumor
1.5
1025
Tumor
1.3
817
Tumor
1.3
285
Tumor
1.3
863
Tumor
1.2
533
Tumor
1.2
497
Tumor
1.2
743
Tumor
1.1
921
Tumor
1.1
695
Tumor
0.9
411
Tumor
0.9
943
Tumor
0.9
227
Tumor
0.9
671
Tumor
0.9
523
Tumor
0.9
661
Tumor
0.8
473
Tumor
0.8
477
Tumor
0.8
713
Tumor
0.8
471
Tumor
0.8
851
Tumor
0.8
815
Tumor
0.8
553
Tumor
0.8
493
Tumor
0.8
517
Tumor
0.7
641
Tumor
0.7
355
Tumor
0.7
135
Tumor
0.7
221
Tumor
0.7
527
Tumor
0.7
715
Tumor
0.7
363
Tumor
0.7
967
Tumor
0.6
447
Tumor
0.6
535
Tumor
0.6
131
Tumor
0.6
463
Tumor
0.6
685
Tumor
0.6
745
Tumor
0.6
571
Tumor
0.6
727
Tumor
0.6
814
Normal
0.6
617
Tumor
0.6
271
Tumor
0.6
277
Tumor
0.6
823
Tumor
0.6
573
Tumor
0.6
813
Tumor
0.5
383
Tumor
0.5
537
Tumor
0.5
443
Tumor
0.5
957
Tumor
0.5
375
Tumor
0.5
367
Tumor
0.5
917
Tumor
0.5
953
Tumor
0.5
865
Tumor
0.5
515
Tumor
0.5
1043
Tumor
0.5
311
Tumor
0.5
975
Tumor
0.5
857
Tumor
0.5
413
Tumor
0.5
923
Tumor
0.5
635
Tumor
0.5
445
Tumor
0.5
937
Tumor
0.5
918
Normal
0.4
925
Tumor
0.4
283
Tumor
0.4
444
Normal
0.4
361
Tumor
0.4
965
Tumor
0.4
123
Tumor
0.4
563
Tumor
0.4
433
Tumor
0.4
492
Normal
0.4
724
Normal
0.4
647
Tumor
0.4
1045
Tumor
0.4
223
Tumor
0.4
455
Tumor
0.4
518
Normal
0.4
451
Tumor
0.4
1016
Normal
0.3
1031
Tumor
0.3
525
Tumor
0.3
955
Tumor
0.3
861
Tumor
0.3
567
Tumor
0.3
954
Normal
0.3
663
Tumor
0.3
852
Normal
0.3
313
Tumor
0.3
952
Normal
0.3
385
Tumor
0.3
816
Normal
0.3
976
Normal
0.3
513
Tumor
0.3
545
Tumor
0.3
461
Tumor
0.3
357
Tumor
0.3
472
Normal
0.3
714
Normal
0.3
1042
Normal
0.3
474
Normal
0.3
944
Normal
0.3
498
Normal
0.3
125
Tumor
0.3
984
Normal
0.3
728
Normal
0.3
721
Tumor
0.3
343
Tumor
0.2
866
Normal
0.2
364
Normal
0.2
351
Tumor
0.2
696
Normal
0.2
557
Tumor
0.2
554
Normal
0.2
195
Tumor
0.2
1014
Normal
0.2
481
Tumor
0.2
395
Tumor
0.2
978
Normal
0.2
1026
Normal
0.2
467
Tumor
0.2
951
Tumor
0.2
434
Normal
0.2
924
Normal
0.2
858
Normal
0.2
874
Normal
0.2
716
Normal
0.2
112
Tumor
0.2
873
Tumor
0.2
145
Tumor
0.1
777
Tumor
0.1
482
Normal
0.1
431
Tumor
0.1
491
Tumor
0.1
211
Tumor
0.1
427
Tumor
0.1
478
Normal
0.1
982
Normal
0.1
868
Normal
0.1
217
Tumor
0.1
416
Normal
0.1
435
Tumor
0.1
916
Normal
0.1
546
Normal
0.1
516
Normal
0.1
672
Normal
0.1
864
Normal
0.1
963
Tumor
0.1
1028
Normal
0.1
968
Normal
0.1
958
Normal
0.1
574
Normal
0.1
1041
Tumor
0.1
161
Tumor
0.1
1015
Tumor
0.1
327
Tumor
0.1
915
Tumor
0.1
267
Tumor
0.1
391
Tumor
0.1
824
Normal
0.1
983
Tumor
0.1
528
Normal
0.1
213
Tumor
0.1
331
Tumor
0.1
524
Normal
0.1
514
Normal
0.1
538
Normal
0.1
744
Normal
0.0
977
Tumor
0.0
425
Tumor
0.0
564
Normal
0.0
526
Normal
0.0
423
Tumor
0.0
867
Tumor
0.0
462
Normal
0.0
722
Normal
0.0
268
Normal
0.0
665
Tumor
0.0
956
Normal
0.0
723
Tumor
0.0
415
Tumor
0.0
224
Normal
0.0
297
Tumor
0.0
421
Tumor
0.0
141
Tumor
0.0
328
Normal
0.0
1032
Normal
0.0
741
Tumor
0.0
642
Normal
0.0
922
Normal
0.0
365
Tumor
0.0
384
Normal
0.0
487
Tumor
0.0
127
Tumor
0.0
436
Normal
0.0
558
Normal
0.0
448
Normal
0.0
1022
Normal
-0.1
686
Normal
-0.1
137
Tumor
-0.1
356
Normal
-0.1
742
Normal
-0.1
981
Tumor
-0.1
697
Tumor
-0.1
393
Tumor
-0.1
1027
Tumor
-0.1
966
Normal
-0.1
572
Normal
-0.1
494
Normal
-0.1
284
Normal
-0.1
187
Tumor
-0.1
412
Normal
-0.1
738
Normal
-0.1
1013
Tumor
-0.1
786
Normal
-0.1
228
Normal
-0.1
257
Tumor
-0.1
534
Normal
-0.2
926
Normal
-0.2
432
Normal
-0.2
964
Normal
-0.2
778
Normal
-0.2
185
Tumor
-0.2
483
Tumor
-0.2
862
Normal
-0.2
938
Normal
-0.2
698
Normal
-0.2
366
Normal
-0.2
484
Normal
-0.2
618
Normal
-0.2
422
Normal
-0.2
272
Normal
-0.2
628
Normal
-0.2
1021
Tumor
-0.2
568
Normal
-0.2
362
Normal
-0.2
456
Normal
-0.2
615
Tumor
-0.2
1046
Normal
-0.2
353
Tumor
-0.3
368
Normal
-0.3
126
Normal
-0.3
488
Normal
-0.3
627
Tumor
-0.3
261
Tumor
-0.3
446
Normal
-0.3
232
Normal
-0.3
286
Normal
-0.3
664
Normal
-0.3
262
Normal
-0.3
258
Normal
-0.3
666
Normal
-0.3
424
Normal
-0.3
192
Normal
-0.3
188
Normal
-0.3
648
Normal
-0.3
191
Tumor
-0.3
428
Normal
-0.4
1044
Normal
-0.4
136
Normal
-0.4
755
Tumor
-0.4
113
Tumor
-0.4
212
Normal
-0.4
278
Normal
-0.4
142
Normal
-0.4
662
Normal
-0.4
386
Normal
-0.4
138
Normal
-0.4
341
Tumor
-0.4
536
Normal
-0.4
426
Normal
-0.4
387
Tumor
-0.4
358
Normal
-0.4
392
Normal
-0.5
464
Normal
-0.5
785
Tumor
-0.5
132
Normal
-0.5
114
Normal
-0.5
231
Tumor
-0.5
354
Normal
-0.5
312
Normal
-0.5
376
Normal
-0.5
756
Normal
-0.5
111
Normal
-0.5
616
Normal
-0.5
124
Normal
-0.5
636
Normal
-0.6
414
Normal
-0.6
352
Normal
-0.6
818
Normal
-0.6
388
Normal
-0.6
465
Tumor
-0.6
344
Normal
-0.6
146
Normal
-0.6
314
Normal
-0.6
342
Normal
-0.6
396
Normal
-0.6
298
Normal
-0.6
218
Normal
-0.7
171
Tumor
-0.7
452
Normal
-0.7
746
Normal
-0.7
468
Normal
-0.7
147
Tumor
-0.7
214
Normal
-0.8
466
Normal
-0.8
222
Normal
-0.8
332
Normal
-0.8
196
Normal
-0.9
186
Normal
-0.9
148
Normal
-1.0
162
Normal
-1.1
128
Normal
-1.1
394
Normal
-1.2
172
Normal
-1.2
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
877
Tumor
N/A
878
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
883
Tumor
N/A
884
Normal
N/A
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
