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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
97.1
nTPM
HPA Brain:
59.5
nTPM
GTEx:
97.1
nTPM
FANTOM5:
40.1
Scaled Tags Per Million
Pig:
60.3
nTPM
Mouse:
157.9
nTPM
Allen mouse:
10.6
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
59.5
Sample id
Sample description
nTPM
Amygdala nTPM: 59.5
2814
Male, age 76, right hemisphere
65.8
2514
Male, age 75, right hemisphere
59.3
2517
Female, age 94, left hemisphere
59.0
2695
Female, age 67, right hemisphere
56.9
1987
Female, age 91, left hemisphere
56.4
Basal amygdala nTPM: 52.3
2110
Male, age 80, left hemisphere
61.5
2609
Male, age 75, right hemisphere
61.2
2685
Female, age 94, left hemisphere
52.9
2243
Female, age 91, right hemisphere
52.0
1955
Male, age 76, both hemispheres
51.8
2827
Female, age 67, right hemisphere
34.1
Central amygdala nTPM: 56.1
2515
Male, age 75, right hemisphere
63.9
2826
Female, age 94, left hemisphere
57.6
1905
Male, age 76, both hemispheres
55.1
2239
Male, age 80, left hemisphere
54.6
2701
Female, age 91, right hemisphere
49.5
Corticomedial amygdala nTPM: 53.9
2428
Male, age 75, right hemisphere
66.2
2829
Male, age 80, left hemisphere
65.7
2429
Female, age 94, left hemisphere
54.6
2242
Female, age 91, right hemisphere
53.4
2240
Male, age 76, both hemispheres
47.8
2535
Female, age 67, right hemisphere
35.6
Lateral amygdala nTPM: 54.3
2516
Male, age 75, right hemisphere
68.8
1883
Male, age 76, both hemispheres
63.5
2534
Female, age 94, left hemisphere
63.0
2256
Male, age 80, left hemisphere
49.7
2255
Female, age 91, right hemisphere
43.6
2830
Female, age 67, right hemisphere
37.4
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
97.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 97.1
Samples: 152
Max nTPM: 202.5
Min nTPM: 52.9
Std nTPM: 21.7
Median nTPM: 95.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
202.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
187.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
183.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
163.2
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
151.6
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
135.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
133.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
129.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
126.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
123.2
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
122.7
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
122.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
122.4
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
121.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
121.0
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
118.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
117.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
116.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
116.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
116.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
115.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
115.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
115.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
115.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
113.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
113.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
112.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
111.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
111.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
110.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
110.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
106.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
106.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
106.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
105.7
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
105.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
105.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
104.9
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
104.6
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
104.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
104.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
104.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
103.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
103.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
102.9
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
102.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
102.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
102.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
102.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
102.0
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
101.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
101.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
101.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
100.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
100.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
99.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
99.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
99.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
99.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
99.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
99.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
99.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
98.6
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
98.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
97.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
97.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
97.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
97.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
96.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
96.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
96.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
96.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
96.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
95.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
95.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
95.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
95.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
95.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
95.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
94.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
94.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
94.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
94.5
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
94.1
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
93.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
93.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
92.8
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
92.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
92.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
92.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
91.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
91.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
90.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
90.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
90.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
90.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
90.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
89.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
89.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
89.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
88.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
88.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
87.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
87.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
87.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
86.5
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
86.3
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
86.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
85.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
85.1
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
84.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
84.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
84.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
83.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
82.1
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
82.0
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
80.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
80.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
79.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
79.9
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
79.5
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
79.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
78.8
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
78.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
77.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
77.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
77.5
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
77.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
76.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
76.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
76.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
75.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
75.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
74.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
74.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
74.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
74.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
72.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
72.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
71.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
71.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
71.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
71.4
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
71.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
69.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
69.0
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
68.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
67.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
67.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
66.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
65.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
52.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
157.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 157.9
Samples: 4
Max nTPM: 163.5
Min nTPM: 153.7
Sample A
Male
163.5
Sample B
Male
156.8
Sample C
Female
157.6
Sample D
Female
153.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.