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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPSA is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
709.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
2987.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
2409.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
1908.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
1861.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
1815.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
1569.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
1458.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
1450.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
1400.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
1371.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
1216.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
1198.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
1151.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
1148.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
1141.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
1134.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
1100.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
1095.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
1071.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
982.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
959.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
928.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
922.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
903.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
869.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
813.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
791.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
761.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
734.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
685.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
635.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
626.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
567.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
535.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
510.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
413.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
384.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
366.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
359.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
336.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
311.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
281.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
230.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
194.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
176.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
166.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
160.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
134.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
122.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
105.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
91.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
86.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
78.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
77.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
74.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
71.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
71.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
69.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
64.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
63.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
62.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
60.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
40.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPSA is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
725.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4183.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
3399.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
2407.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
2354.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
2100.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
1826.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
1825.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
1771.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
1709.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
1682.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
1662.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
1645.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
1594.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1582.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
1517.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
1441.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
1435.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
1395.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
1382.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
1382.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
1381.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
1377.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
1314.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
1313.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
1304.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
1287.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
1284.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
1278.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
1267.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
1262.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
1261.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
1253.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
1250.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
1244.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
1230.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
1223.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
1221.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
1211.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
1207.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
1189.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
1184.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
1159.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
1154.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
1153.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
1149.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
1133.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
1128.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
1112.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
1109.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
1105.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
1103.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
1098.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
1097.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
1092.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
1083.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
1074.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
1073.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
1069.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
1067.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
1064.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
1055.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
1047.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
1015.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
1014.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
1011.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
989.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
981.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
975.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
975.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
970.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
969.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
961.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
959.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
957.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
955.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
955.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
953.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
949.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
947.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
940.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
938.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
938.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
937.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
934.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
933.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
933.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
920.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
919.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
914.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
912.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
912.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
910.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
908.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
905.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
903.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
902.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
895.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
893.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
890.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
888.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
882.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
880.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
878.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
877.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
875.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
873.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
872.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
872.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
870.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
863.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
861.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
858.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
854.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
852.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
851.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
849.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
847.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
845.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
841.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
840.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
836.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
836.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
832.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
832.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
829.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
827.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
826.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
826.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
823.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
823.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
823.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
819.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
814.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
811.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
810.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
809.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
808.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
808.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
807.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
806.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
804.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
802.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
800.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
798.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
797.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
797.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
794.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
794.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
793.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
790.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
789.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
788.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
788.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
787.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
785.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
783.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
783.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
778.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
775.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
775.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
775.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
775.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
773.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
773.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
772.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
772.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
766.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
762.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
761.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
757.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
755.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
754.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
753.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
750.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
750.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
750.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
748.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
746.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
744.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
744.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
744.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
744.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
743.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
742.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
742.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
739.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
737.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
734.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
733.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
732.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
731.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
729.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
727.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
727.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
726.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
726.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
725.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
725.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
724.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
721.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
719.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
719.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
719.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
718.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
717.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
716.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
715.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
713.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
709.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
705.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
703.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
702.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
700.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
700.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
699.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
699.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
697.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
697.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
696.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
695.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
695.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
695.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
694.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
693.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
691.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
690.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
689.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
689.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
689.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
689.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
689.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
689.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
686.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
685.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
684.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
683.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
681.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
681.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
681.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
680.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
678.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
675.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
675.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
675.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
674.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
674.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
673.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
671.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
670.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
666.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
664.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
664.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
661.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
658.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
654.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
653.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
653.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
650.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
649.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
647.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
647.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
645.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
644.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
644.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
643.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
643.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
641.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
640.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
638.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
638.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
638.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
636.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
636.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
636.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
636.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
633.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
631.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
631.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
630.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
629.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
627.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
626.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
625.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
621.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
621.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
618.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
618.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
616.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
615.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
615.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
614.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
614.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
613.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
612.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
611.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
611.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
610.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
610.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
610.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
604.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
604.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
603.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
603.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
603.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
601.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
601.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
599.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
598.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
598.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
598.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
598.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
597.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
597.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
594.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
593.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
592.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
592.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
591.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
588.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
584.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
583.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
581.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
581.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
581.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
580.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
580.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
579.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
576.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
576.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
575.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
575.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
574.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
572.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
571.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
570.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
568.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
567.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
567.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
567.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
566.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
563.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
561.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
560.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
559.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
559.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
558.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
558.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
557.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
557.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
556.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
555.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
555.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
555.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
554.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
554.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
553.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
552.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
551.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
550.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
550.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
550.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
549.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
548.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
548.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
547.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
547.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
546.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
546.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
546.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
544.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
543.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
543.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
542.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
542.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
539.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
537.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
537.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
537.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
537.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
537.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
536.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
536.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
533.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
532.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
531.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
530.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
530.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
530.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
530.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
529.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
529.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
528.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
528.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
527.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
527.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
527.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
527.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
525.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
523.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
523.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
522.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
521.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
520.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
519.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
517.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
516.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
514.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
514.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
513.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
512.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
509.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
508.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
508.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
508.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
507.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
507.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
507.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
506.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
506.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
503.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
500.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
499.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
498.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
497.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
497.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
497.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
497.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
496.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
496.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
495.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
495.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
494.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
492.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
490.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
490.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
489.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
489.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
489.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
487.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
487.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
486.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
484.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
482.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
480.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
478.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
477.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
476.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
476.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
475.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
472.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
472.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
470.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
470.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
469.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
468.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
468.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
468.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
466.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
466.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
465.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
463.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
463.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
460.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
457.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
457.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
457.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
452.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
444.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
443.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
439.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
439.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
438.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
427.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
427.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
427.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
425.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
421.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
418.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
418.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
417.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
415.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
412.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
412.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
409.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
407.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
407.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
406.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
404.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
402.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
389.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
386.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
385.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
384.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
381.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
380.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
380.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
380.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
379.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
377.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
373.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
362.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
358.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
356.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
353.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
352.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
347.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
335.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
333.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
328.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
321.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
321.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
320.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
319.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
308.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
297.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
293.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
285.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
254.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
219.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
207.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPSA is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
608.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
1441.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
1426.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
1195.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
1189.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
1136.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
1093.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
1082.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
1071.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
1044.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
965.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
932.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
879.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
874.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
855.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
853.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
838.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
822.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
817.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
815.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
807.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
772.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
763.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
752.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
743.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
720.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
716.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
702.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
691.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
691.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
665.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
655.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
644.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
638.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
627.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
622.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
613.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
609.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
602.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
600.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
594.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
591.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
589.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
587.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
586.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
581.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
575.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
572.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
566.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
564.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
562.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
557.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
556.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
555.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
545.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
543.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
531.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
524.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
524.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
524.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
509.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
505.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
502.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
501.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
501.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
496.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
478.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
477.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
477.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
470.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
464.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
460.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
454.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
450.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
449.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
449.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
441.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
434.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
426.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
423.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
413.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
408.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
408.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
408.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
406.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
406.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
399.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
397.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
378.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
355.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
346.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
337.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
337.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
335.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
331.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
321.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
313.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
272.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
252.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
248.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPSA is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
879.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
3578.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
2561.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
2534.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
2456.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
2311.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
2253.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
2206.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
2105.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
2095.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
2057.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
2042.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
1995.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
1981.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
1965.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
1942.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
1942.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
1924.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
1850.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
1801.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
1754.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1728.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
1714.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
1709.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
1707.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1692.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
1676.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
1675.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
1663.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
1633.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
1630.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
1624.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
1616.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
1598.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
1565.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
1563.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
1492.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
1474.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
1471.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
1464.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
1455.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
1447.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
1443.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
1435.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1430.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
1419.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
1418.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1418.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
1409.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
1404.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
1393.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
1375.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
1355.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
1339.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
1338.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
1317.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
1307.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
1303.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
1297.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
1294.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
1285.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
1284.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
1277.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
1277.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
1275.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
1267.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
1266.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
1266.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
1263.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
1263.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
1237.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
1233.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
1232.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
1225.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
1214.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
1214.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
1211.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
1206.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
1201.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
1190.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
1186.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
1182.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
1172.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
1171.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
1164.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
1163.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
1149.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
1143.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
1142.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
1140.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
1118.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
1115.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
1114.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
1106.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
1104.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
1101.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
1099.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
1089.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1088.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
1088.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
1087.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
1084.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
1084.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
1075.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
1070.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
1067.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
1049.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
1049.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
1044.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
1041.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
1030.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
1025.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
1022.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
1019.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
1014.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
1004.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
1003.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
998.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
998.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
998.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
997.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
995.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
989.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
988.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
987.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
987.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
981.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
977.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
976.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
962.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
962.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
939.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
936.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
932.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
930.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
929.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
922.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
917.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
916.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
915.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
906.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
899.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
898.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
896.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
895.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
887.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
887.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
883.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
879.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
878.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
869.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
862.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
861.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
861.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
853.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
849.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
840.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
839.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
818.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
814.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
803.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
801.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
793.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
791.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
777.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
776.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
773.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
770.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
767.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
761.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
759.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
756.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
752.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
747.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
743.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
741.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
738.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
731.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
729.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
727.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
725.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
694.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
691.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
689.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
682.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
680.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
672.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
671.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
666.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
657.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
653.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
641.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
634.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
626.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
624.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
606.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
603.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
603.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
602.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
599.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
590.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
583.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
564.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
559.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
559.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
517.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
499.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
463.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
459.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
456.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
420.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
372.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
264.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
231.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
220.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
201.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
186.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
173.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
169.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
163.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
163.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
163.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
159.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
150.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
144.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
141.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
141.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
137.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
134.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
132.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
131.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
130.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
128.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
127.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
121.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
120.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
114.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
110.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
109.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
106.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
105.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
101.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
96.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
94.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
93.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
92.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
91.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
91.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
89.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
89.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
86.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
85.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
85.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
81.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
79.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
79.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
77.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
71.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
69.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
68.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
68.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
67.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
65.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
64.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
63.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
62.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
61.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
61.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
54.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
54.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
54.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
54.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
52.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
50.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
45.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
41.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
40.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
33.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
30.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
28.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
27.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
20.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
16.1
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
0.6
CPT0001340003
Tumor
0.5
CPT0078510003
Tumor
0.5
CPT0012180003
Tumor
0.4
CPT0012550003
Tumor
0.4
CPT0076330003
Tumor
0.4
CPT0084560003
Tumor
0.4
CPT0069160003
Tumor
0.4
CPT0017410003
Tumor
0.4
CPT0086030003
Tumor
0.4
CPT0092290003
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0077310003
Tumor
0.4
CPT0017850003
Tumor
0.4
CPT0009000003
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0023350003
Tumor
0.3
CPT0088760003
Tumor
0.3
CPT0001180009
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0065750003
Tumor
0.3
CPT0086950003
Tumor
0.3
CPT0011240003
Tumor
0.3
CPT0063630003
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0011410003
Tumor
0.2
CPT0024680001
Normal
0.2
CPT0025880003
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0014160003
Tumor
0.2
CPT0079180003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0000780007
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0092730003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0026410003
Tumor
0.2
CPT0077320001
Normal
0.2
CPT0012080003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0065430003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0006630003
Tumor
0.1
CPT0088970003
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0010120001
Normal
0.1
CPT0078930003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0069000003
Tumor
0.1
CPT0066480003
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0025290003
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0002270011
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0078840001
Normal
0.1
CPT0015910003
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0012570003
Normal
0.1
CPT0079510001
Normal
0.1
CPT0081880003
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0077490003
Tumor
0.0
CPT0086870003
Tumor
0.0
CPT0001540009
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0076350001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0078800003
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0088690003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0077110003
Tumor
0.0
CPT0012770003
Normal
0.0
CPT0025350003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0079270003
Tumor
0.0
CPT0078660003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0025580004
Tumor
0.0
CPT0065810003
Tumor
0.0
CPT0078990003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0018250001
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0088480003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0069190001
Normal
0.0
CPT0012640003
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0009080003
Normal
0.0
CPT0089040001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0012290003
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0088630003
Tumor
-0.1
CPT0088780001
Normal
-0.1
CPT0000870016
Tumor
-0.1
CPT0014130001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0063320003
Tumor
-0.1
CPT0020130001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0000640003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0078830003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0007870001
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0063640001
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0092800003
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0079000001
Normal
-0.2
CPT0092740003
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0006730001
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0010170001
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0065870003
Tumor
-0.2
CPT0079430001
Normal
-0.2
CPT0088640003
Normal
-0.2
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
