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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZNF598 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
31.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
25.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
24.4
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
23.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
21.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
21.4
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
20.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
20.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
19.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
18.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
17.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
17.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
17.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
17.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
16.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
16.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
16.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
16.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
15.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
15.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
15.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
15.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
15.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
15.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
14.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
14.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
14.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
13.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
13.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
13.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
13.7
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
13.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
13.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
13.5
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
13.5
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
13.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
13.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
13.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
13.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
13.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
13.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
13.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
13.0
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
13.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
12.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
12.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
12.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
12.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
12.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
12.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
12.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
12.3
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
12.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
12.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
11.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
11.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
11.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
11.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
11.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
11.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
11.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
11.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
11.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
11.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
11.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
11.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
11.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
11.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
11.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
11.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
11.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
11.1
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
11.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
11.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
10.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
10.9
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
10.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
10.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
10.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
10.6
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
10.6
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
10.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
10.4
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
10.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
10.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
10.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
10.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
10.4
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
10.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
10.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
10.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
10.2
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
10.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
10.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
10.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
10.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
9.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
9.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
9.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
9.9
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
9.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
9.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
9.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
9.7
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
9.7
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
9.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
9.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
9.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
9.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
9.5
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
9.5
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
9.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
9.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
9.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
9.4
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
9.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
9.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
9.3
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
9.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
9.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
9.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
9.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
9.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
8.9
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
8.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
8.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
8.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
8.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
8.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
8.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
8.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
8.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
8.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
8.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
8.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
8.5
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
8.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
8.4
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
8.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
8.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
8.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
8.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
8.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
8.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
8.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
8.2
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
8.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
8.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
8.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
8.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
8.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
8.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
8.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
8.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
8.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
7.9
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
7.9
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
7.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
7.9
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
7.9
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
7.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
7.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
7.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
7.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
7.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
7.7
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
7.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
7.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
7.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
7.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
7.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
7.6
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
7.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
7.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
7.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
7.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
7.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
7.6
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
7.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
7.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
7.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
7.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
7.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
7.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
7.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
7.4
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
7.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
7.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
7.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
7.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
7.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
7.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
7.1
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
7.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
7.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
7.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
7.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
7.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
7.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
6.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
6.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
6.7
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
6.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
6.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
6.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
6.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
6.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
6.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
6.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
6.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
6.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
6.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
6.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
6.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
6.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
6.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
6.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
6.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
6.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
6.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
6.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
6.3
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
6.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
6.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
6.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
6.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
6.1
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
6.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
6.1
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
6.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
6.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
6.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
6.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
5.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
5.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
5.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
5.9
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
5.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
5.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
5.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
5.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
5.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
5.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
5.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
5.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
5.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
5.5
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
5.5
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
5.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
5.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
5.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
5.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
5.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
5.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
5.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
5.3
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
5.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
5.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
5.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
5.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
5.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
5.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
5.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
5.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
5.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
5.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
4.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
4.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
4.9
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
4.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
4.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
4.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
4.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
4.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
4.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
4.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
4.6
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
4.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
4.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
4.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
4.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
4.5
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
4.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
4.4
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
4.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
4.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
4.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
4.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
4.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
3.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
3.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
3.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
3.8
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
3.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
3.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
3.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
3.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
3.7
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
3.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
3.6
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
3.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
3.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
3.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
3.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
3.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
3.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
3.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
3.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
3.4
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
3.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
3.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
3.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
3.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
3.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
3.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
2.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.9
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
2.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
2.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
2.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
2.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
2.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
2.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
2.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
2.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
1.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
1.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
1.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
1.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
1.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
0.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
0.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
0.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
0.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
0.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
0.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
0.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
0.1
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
0.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
0.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
0.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
0.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
0.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
0.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
0.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
0.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZNF598 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.3
Number of samples
231
Samples
Sample
Description
TPM
DO23532
0 years, female, NA, stage:1, alive, 960 days
40.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
35.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
32.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
32.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
30.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
29.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
28.3
DO45209
0 years, male, NA, stage:4, alive, 1350 days
26.9
DO23526
0 years, male, NA, stage:3, alive, 1050 days
26.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
26.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
25.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
24.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
23.9
DO45301
0 years, male, NA, stage:2, dead, 1440 days
23.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
22.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
22.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
21.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
21.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
20.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
20.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
20.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
20.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
20.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
19.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
19.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
19.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
18.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
18.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
18.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
18.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
18.5
DO48737
0 years, male, NA, stage:1, alive, 720 days
18.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
17.7
DO45249
0 years, male, NA, stage:1, alive, 630 days
17.6
DO48757
0 years, female, NA, stage:3, alive, 480 days
17.1
DO48700
0 years, female, NA, stage:2, alive, 810 days
17.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
16.9
DO23511
0 years, female, NA, stage:3, dead, 180 days
16.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
16.9
DO45157
0 years, male, NA, stage:2, alive, 1980 days
16.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
16.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
16.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
15.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
15.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
15.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
15.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
15.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
15.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
15.4
DO45281
0 years, male, NA, stage:4, alive, 750 days
15.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
15.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
15.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
15.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
15.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
15.1
DO23544
0 years, male, NA, stage:2, alive, 960 days
15.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
14.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
14.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
14.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
14.6
DO45193
0 years, female, NA, stage:4, dead, 120 days
14.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
14.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
14.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
14.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
14.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
14.2
DO45231
0 years, male, NA, stage:2, alive, 930 days
14.2
DO45255
0 years, male, NA, stage:3, alive, 720 days
14.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
14.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
13.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
13.7
DO45215
0 years, male, NA, stage:2, alive, 1170 days
13.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
13.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
13.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
13.4
DO23535
0 years, male, NA, stage:1, alive, 960 days
13.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
13.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
13.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
13.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
13.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
13.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
13.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
13.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
13.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
13.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
12.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
12.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
12.8
DO23530
0 years, male, NA, stage:4, dead, 180 days
12.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
12.7
DO23516
0 years, male, NA, stage:3, dead, 20 days
12.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
12.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
12.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
12.6
DO48693
0 years, male, NA, stage:2, alive, 900 days
12.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
12.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
12.3
DO48719
0 years, male, NA, stage:2, alive, 690 days
12.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
12.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
11.9
DO45099
0 years, male, NA, stage:3, alive, 1590 days
11.8
DO45269
0 years, male, NA, stage:3, alive, 750 days
11.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
11.7
DO50832
0 years, male, NA, stage:3, alive, 90 days
11.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
11.7
DO45095
0 years, male, NA, stage:2, alive, 1620 days
11.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
11.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
11.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
11.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
11.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
11.2
DO23528
0 years, female, NA, stage:2, alive, 1020 days
11.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
11.2
DO45243
0 years, female, NA, stage:3, alive, 930 days
11.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
11.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
11.1
DO45245
0 years, female, NA, stage:2, dead, 240 days
11.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
11.1
DO50811
0 years, male, NA, stage:1, alive, 450 days
11.0
DO45289
0 years, female, NA, stage:3, alive, 360 days
11.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
11.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
10.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
10.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
10.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
10.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
10.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
10.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
10.6
DO50818
0 years, male, NA, stage:2, alive, 510 days
10.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
10.3
DO48712
0 years, male, NA, stage:2, alive, 810 days
10.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
10.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
10.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
10.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
10.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
9.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
9.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
9.8
DO48751
0 years, male, NA, stage:2, dead, 480 days
9.7
DO50813
0 years, male, NA, stage:2, alive, 420 days
9.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
9.7
DO23517
0 years, male, NA, stage:2, alive, 1200 days
9.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
9.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
9.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
9.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
9.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
9.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
9.4
DO45171
0 years, male, NA, stage:3, alive, 600 days
9.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
9.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
9.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
9.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
9.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
9.3
DO50808
0 years, male, NA, stage:2, alive, 570 days
9.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
9.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
9.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
9.1
DO48672
0 years, male, NA, stage:2, alive, 450 days
9.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
9.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
8.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
8.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
8.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
8.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
8.8
DO48720
0 years, female, NA, stage:2, alive, 570 days
8.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
8.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
8.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
8.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
8.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
8.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
8.4
DO48677
0 years, male, NA, stage:3, alive, 1140 days
8.4
DO45163
0 years, male, NA, stage:2, alive, 960 days
8.3
DO45201
0 years, male, NA, stage:1, alive, 900 days
8.3
DO48742
0 years, male, NA, stage:2, alive, 600 days
8.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
8.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
8.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
8.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
8.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
8.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
8.0
DO45135
0 years, male, NA, stage:1, alive, 1410 days
8.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
7.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
7.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
7.7
DO45189
0 years, female, NA, stage:2, alive, 1200 days
7.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
7.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
7.6
DO45092
0 years, male, NA, stage:4, dead, 1200 days
7.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
7.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
7.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
7.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
7.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
7.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
7.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
7.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
7.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
7.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
7.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
7.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
7.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
7.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
7.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
6.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
6.8
DO48715
0 years, female, NA, stage:2, dead, 690 days
6.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
6.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
6.7
DO45183
0 years, female, NA, stage:2, dead, 570 days
6.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
6.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
6.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
6.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
5.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
5.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
5.8
DO23524
0 years, female, NA, stage:2, alive, 1050 days
5.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
5.7
DO50820
0 years, female, NA, stage:3, alive, 510 days
5.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
5.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
5.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
5.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
5.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
4.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
4.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
4.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
4.7
DO45247
0 years, female, NA, stage:2, alive, 210 days
4.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
3.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
2.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
2.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
497
Tumor
1.0
473
Tumor
0.9
395
Tumor
0.8
327
Tumor
0.7
297
Tumor
0.6
647
Tumor
0.6
481
Tumor
0.6
913
Tumor
0.5
967
Tumor
0.5
487
Tumor
0.5
777
Tumor
0.5
695
Tumor
0.5
724
Normal
0.4
357
Tumor
0.4
465
Tumor
0.4
635
Tumor
0.4
533
Tumor
0.4
953
Tumor
0.4
267
Tumor
0.4
943
Tumor
0.4
911
Tumor
0.4
223
Tumor
0.4
341
Tumor
0.4
513
Tumor
0.4
515
Tumor
0.4
527
Tumor
0.3
231
Tumor
0.3
912
Normal
0.3
523
Tumor
0.3
365
Tumor
0.3
446
Normal
0.3
615
Tumor
0.3
925
Tumor
0.3
1015
Tumor
0.3
211
Tumor
0.3
573
Tumor
0.3
312
Normal
0.3
698
Normal
0.3
663
Tumor
0.3
482
Normal
0.3
427
Tumor
0.3
313
Tumor
0.3
524
Normal
0.3
433
Tumor
0.3
957
Tumor
0.3
187
Tumor
0.3
461
Tumor
0.3
937
Tumor
0.3
616
Normal
0.3
393
Tumor
0.3
525
Tumor
0.3
484
Normal
0.3
368
Normal
0.3
786
Normal
0.2
472
Normal
0.2
222
Normal
0.2
451
Tumor
0.2
112
Tumor
0.2
514
Normal
0.2
474
Normal
0.2
696
Normal
0.2
356
Normal
0.2
1032
Normal
0.2
756
Normal
0.2
938
Normal
0.2
518
Normal
0.2
628
Normal
0.2
923
Tumor
0.2
858
Normal
0.2
862
Normal
0.2
785
Tumor
0.2
955
Tumor
0.2
1028
Normal
0.2
714
Normal
0.2
278
Normal
0.2
415
Tumor
0.2
358
Normal
0.2
722
Normal
0.2
868
Normal
0.2
526
Normal
0.2
884
Normal
0.2
824
Normal
0.2
136
Normal
0.2
814
Normal
0.2
286
Normal
0.2
864
Normal
0.2
298
Normal
0.2
1046
Normal
0.2
617
Tumor
0.2
447
Tumor
0.2
462
Normal
0.2
642
Normal
0.2
882
Normal
0.2
516
Normal
0.2
448
Normal
0.2
353
Tumor
0.2
627
Tumor
0.2
1045
Tumor
0.2
528
Normal
0.2
918
Normal
0.2
956
Normal
0.2
745
Tumor
0.2
636
Normal
0.2
258
Normal
0.2
778
Normal
0.2
958
Normal
0.2
662
Normal
0.2
145
Tumor
0.2
376
Normal
0.2
436
Normal
0.2
332
Normal
0.2
228
Normal
0.2
354
Normal
0.2
926
Normal
0.2
697
Tumor
0.2
664
Normal
0.2
1022
Normal
0.2
666
Normal
0.2
416
Normal
0.2
721
Tumor
0.2
191
Tumor
0.1
648
Normal
0.1
737
Tumor
0.1
968
Normal
0.1
915
Tumor
0.1
328
Normal
0.1
314
Normal
0.1
1041
Tumor
0.1
311
Tumor
0.1
914
Normal
0.1
618
Normal
0.1
141
Tumor
0.1
351
Tumor
0.1
412
Normal
0.1
284
Normal
0.1
361
Tumor
0.1
396
Normal
0.1
981
Tumor
0.1
1016
Normal
0.1
212
Normal
0.1
917
Tumor
0.1
866
Normal
0.1
171
Tumor
0.1
965
Tumor
0.1
362
Normal
0.1
232
Normal
0.1
728
Normal
0.1
1026
Normal
0.1
723
Tumor
0.1
964
Normal
0.1
331
Tumor
0.1
916
Normal
0.1
384
Normal
0.1
283
Tumor
0.1
742
Normal
0.1
982
Normal
0.1
567
Tumor
0.1
665
Tumor
0.1
852
Normal
0.1
132
Normal
0.1
466
Normal
0.1
464
Normal
0.1
366
Normal
0.1
572
Normal
0.1
977
Tumor
0.1
352
Normal
0.1
444
Normal
0.1
493
Tumor
0.1
343
Tumor
0.1
425
Tumor
0.1
571
Tumor
0.1
355
Tumor
0.1
534
Normal
0.1
924
Normal
0.1
813
Tumor
0.1
1042
Normal
0.1
554
Normal
0.1
944
Normal
0.1
127
Tumor
0.1
114
Normal
0.1
494
Normal
0.1
746
Normal
0.1
113
Tumor
0.1
738
Normal
0.1
818
Normal
0.1
1014
Normal
0.1
344
Normal
0.1
1013
Tumor
0.1
558
Normal
0.1
148
Normal
0.1
857
Tumor
0.1
388
Normal
0.1
878
Normal
0.1
557
Tumor
0.1
568
Normal
0.1
142
Normal
0.1
272
Normal
0.1
564
Normal
0.1
342
Normal
0.1
218
Normal
0.1
111
Normal
0.1
364
Normal
0.1
952
Normal
0.1
1044
Normal
0.1
452
Normal
0.1
394
Normal
0.1
716
Normal
0.0
217
Tumor
0.0
546
Normal
0.0
536
Normal
0.0
195
Tumor
0.0
414
Normal
0.0
816
Normal
0.0
922
Normal
0.0
392
Normal
0.0
428
Normal
0.0
456
Normal
0.0
574
Normal
0.0
492
Normal
0.0
976
Normal
0.0
686
Normal
0.0
861
Tumor
0.0
413
Tumor
0.0
978
Normal
0.0
468
Normal
0.0
434
Normal
0.0
672
Normal
0.0
391
Tumor
0.0
867
Tumor
0.0
124
Normal
0.0
411
Tumor
0.0
386
Normal
0.0
262
Normal
0.0
455
Tumor
0.0
383
Tumor
0.0
268
Normal
0.0
966
Normal
0.0
285
Tumor
0.0
478
Normal
0.0
214
Normal
0.0
188
Normal
0.0
488
Normal
0.0
984
Normal
0.0
126
Normal
0.0
445
Tumor
0.0
128
Normal
0.0
498
Normal
0.0
463
Tumor
0.0
162
Normal
0.0
851
Tumor
0.0
138
Normal
0.0
172
Normal
0.0
426
Normal
0.0
422
Normal
0.0
563
Tumor
0.0
186
Normal
0.0
147
Tumor
-0.1
432
Normal
-0.1
135
Tumor
-0.1
125
Tumor
-0.1
224
Normal
-0.1
367
Tumor
-0.1
873
Tumor
-0.1
196
Normal
-0.1
387
Tumor
-0.1
954
Normal
-0.1
975
Tumor
-0.1
661
Tumor
-0.1
535
Tumor
-0.1
257
Tumor
-0.1
424
Normal
-0.1
123
Tumor
-0.1
963
Tumor
-0.1
755
Tumor
-0.1
715
Tumor
-0.1
192
Normal
-0.1
671
Tumor
-0.1
261
Tumor
-0.1
277
Tumor
-0.1
443
Tumor
-0.1
146
Normal
-0.1
423
Tumor
-0.1
467
Tumor
-0.1
881
Tumor
-0.1
483
Tumor
-0.1
545
Tumor
-0.1
477
Tumor
-0.1
1027
Tumor
-0.1
741
Tumor
-0.1
421
Tumor
-0.1
137
Tumor
-0.1
161
Tumor
-0.1
874
Normal
-0.2
1021
Tumor
-0.2
375
Tumor
-0.2
517
Tumor
-0.2
213
Tumor
-0.2
863
Tumor
-0.2
743
Tumor
-0.2
538
Normal
-0.2
491
Tumor
-0.2
713
Tumor
-0.2
537
Tumor
-0.2
271
Tumor
-0.2
221
Tumor
-0.2
185
Tumor
-0.2
744
Normal
-0.2
883
Tumor
-0.2
865
Tumor
-0.3
817
Tumor
-0.3
727
Tumor
-0.3
431
Tumor
-0.3
385
Tumor
-0.3
471
Tumor
-0.3
823
Tumor
-0.3
641
Tumor
-0.3
951
Tumor
-0.3
1025
Tumor
-0.4
131
Tumor
-0.4
435
Tumor
-0.4
983
Tumor
-0.4
363
Tumor
-0.5
1043
Tumor
-0.5
1031
Tumor
-0.5
553
Tumor
-0.5
227
Tumor
-0.5
815
Tumor
-0.6
921
Tumor
-0.6
877
Tumor
-0.6
685
Tumor
-0.8
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
