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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TK1 is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
65.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
25.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
25.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
15.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
15.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
13.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
13.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
12.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
11.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
11.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
10.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
9.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
8.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
7.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
6.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
6.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
6.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
5.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
5.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
5.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
5.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
4.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
4.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
4.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
4.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
4.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
4.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
4.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
4.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
3.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
3.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
3.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
3.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
3.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
2.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
2.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
2.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
2.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
2.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
2.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
2.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
2.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
1.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
1.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
1.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
1.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
1.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
1.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
1.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
1.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
1.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
1.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TK1 is validated prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
155.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
148.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
107.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
105.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
102.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
101.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
101.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
96.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
94.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
93.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
87.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
82.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
69.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
63.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
61.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
61.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
60.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
59.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
58.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
55.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
53.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
52.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
52.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
51.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
49.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
49.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
49.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
47.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
47.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
47.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
45.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
45.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
44.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
44.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
43.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
42.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
40.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
40.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
40.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
39.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
39.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
38.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
38.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
37.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
37.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
36.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
36.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
35.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
35.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
35.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
34.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
34.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
33.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
33.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
33.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
32.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
32.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
32.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
32.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
32.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
32.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
31.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
31.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
30.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
30.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
29.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
29.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
29.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
29.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
29.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
29.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
29.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
28.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
28.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
28.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
28.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
28.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
28.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
28.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
28.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
28.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
28.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
28.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
28.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
27.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
27.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
27.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
27.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
27.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
27.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
27.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
27.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
26.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
26.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
26.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
26.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
26.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
26.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
26.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
26.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
25.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
25.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
25.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
25.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
25.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
25.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
25.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
25.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
25.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
24.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
24.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
24.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
24.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
24.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
24.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
23.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
23.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
23.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
23.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
23.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
23.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
23.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
23.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
23.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
23.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
22.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
22.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
22.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
22.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
22.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
22.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
22.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
22.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
22.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
22.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
22.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
22.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
21.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
21.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
21.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
21.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
21.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
21.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
21.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
21.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
21.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
21.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
21.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
21.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
21.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
20.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
20.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
20.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
20.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
20.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
20.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
20.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
20.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
20.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
20.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
20.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
20.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
20.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
20.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
20.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
19.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
19.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
19.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
19.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
19.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
19.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
19.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
19.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
19.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
19.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
19.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
19.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
19.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
19.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
19.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
19.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
19.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
18.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
18.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
18.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
18.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
18.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
18.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
18.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
18.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
18.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
18.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
18.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
18.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
18.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
18.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
18.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
17.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
17.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
17.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
17.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
17.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
17.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
17.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
17.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
17.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
17.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
17.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
17.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
17.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
17.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
17.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
17.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
17.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
16.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
16.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
16.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
16.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
16.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
16.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
16.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
16.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
16.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
16.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
16.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
16.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
16.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
16.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
16.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
16.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
16.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
16.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
16.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
16.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
15.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
15.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
15.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
15.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
15.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
15.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
15.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
15.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
15.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
15.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
15.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
15.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
15.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
15.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
15.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
15.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
15.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
15.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
15.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
15.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
15.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
14.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
14.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
14.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
14.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
14.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
14.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
14.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
14.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
14.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
14.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
14.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
14.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
14.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
14.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
14.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
14.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
14.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
14.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
14.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
14.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
14.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
14.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
14.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
14.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
13.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
13.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
13.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
13.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
13.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
13.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
13.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
13.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
13.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
13.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
13.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
13.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
13.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
13.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
13.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
13.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
13.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
13.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
13.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
13.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
13.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
13.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
13.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
13.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
13.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
13.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
13.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
13.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
13.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
13.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
13.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
13.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
13.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
13.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
12.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
12.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
12.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
12.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
12.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
12.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
12.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
12.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
12.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
12.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
12.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
12.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
12.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
12.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
12.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
12.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
12.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
12.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
12.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
12.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
12.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
12.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
12.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
12.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
12.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
12.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
11.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
11.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
11.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
11.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
11.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
11.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
11.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
11.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
11.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
11.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
11.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
11.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
11.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
11.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
11.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
11.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
11.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
11.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
11.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
11.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
11.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
11.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
11.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
11.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
11.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
11.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
11.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
11.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
11.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
11.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
10.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
10.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
10.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
10.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
10.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
10.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
10.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
10.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
10.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
10.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
10.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
10.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
10.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
10.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
10.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
10.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
10.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
10.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
10.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
10.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
10.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
10.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
10.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
10.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
10.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
10.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
10.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
10.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
10.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
10.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
10.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
10.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
10.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
9.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
9.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
9.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
9.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
9.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
9.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
9.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
9.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
9.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
9.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
9.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
9.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
9.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
9.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
9.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
9.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
9.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
9.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
9.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
9.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
9.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
9.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
9.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
9.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
9.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
9.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
9.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
8.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
8.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
8.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
8.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
8.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
8.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
8.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
8.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
8.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
8.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
8.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
8.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
8.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
8.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
8.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
8.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
7.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
7.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
7.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
7.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
7.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
7.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
7.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
7.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
7.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
7.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
7.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
7.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
7.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
7.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
7.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
7.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
7.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
7.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
6.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
6.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
6.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
6.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
6.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
6.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
6.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
6.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
6.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
6.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
5.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
5.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
5.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
5.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
5.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
5.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
5.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
5.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
5.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
5.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
4.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
4.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
4.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
4.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
4.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
4.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
4.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
4.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
4.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
4.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
4.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
3.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
3.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
3.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
3.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
3.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
2.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
2.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
2.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
2.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
2.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
1.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
1.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
1.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
1.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
1.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
1.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
1.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
1.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TK1 is validated prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
100.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
60.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
55.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
53.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
47.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
44.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
42.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
42.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
38.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
36.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
32.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
31.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
31.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
30.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
29.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
29.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
29.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
26.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
25.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
23.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
22.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
22.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
22.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
22.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
20.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
20.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
20.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
19.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
19.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
19.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
19.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
18.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
18.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
17.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
17.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
17.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
16.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
15.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
15.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
15.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
14.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
14.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
14.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
13.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
13.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
13.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
13.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
13.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
13.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
13.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
12.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
12.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
12.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
12.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
12.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
11.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
11.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
11.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
11.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
10.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
10.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
10.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
10.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
10.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
9.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
9.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
9.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
9.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
9.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
9.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
8.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
8.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
8.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
8.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
8.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
8.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
8.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
7.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
7.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
7.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
7.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
7.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
6.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
6.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
6.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
5.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
5.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
5.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
5.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
5.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
5.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
4.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
4.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
4.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
4.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
3.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
3.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TK1 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
194.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
174.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
153.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
141.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
115.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
111.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
106.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
98.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
96.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
96.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
96.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
92.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
89.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
84.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
82.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
80.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
80.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
77.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
76.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
76.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
76.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
71.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
70.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
69.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
69.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
66.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
65.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
65.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
63.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
63.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
61.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
61.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
59.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
59.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
58.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
58.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
55.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
54.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
53.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
51.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
50.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
49.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
48.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
47.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
47.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
46.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
46.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
44.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
44.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
44.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
42.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
41.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
40.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
39.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
39.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
39.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
38.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
38.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
38.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
38.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
38.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
38.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
37.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
37.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
37.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
36.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
36.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
36.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
35.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
35.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
35.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
35.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
35.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
35.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
34.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
34.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
34.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
33.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
32.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
32.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
32.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
31.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
31.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
31.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
30.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
30.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
30.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
30.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
29.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
29.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
27.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
27.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
27.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
27.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
26.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
26.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
26.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
26.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
26.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
26.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
25.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
25.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
25.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
25.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
25.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
24.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
24.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
24.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
23.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
23.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
23.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
23.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
23.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
23.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
23.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
22.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
22.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
22.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
22.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
22.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
22.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
22.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
22.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
22.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
22.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
21.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
21.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
21.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
21.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
21.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
20.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
20.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
20.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
20.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
20.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
20.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
20.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
20.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
20.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
20.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
20.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
20.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
20.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
19.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
19.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
19.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
19.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
19.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
19.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
19.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
18.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
18.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
18.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
18.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
18.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
18.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
18.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
18.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
18.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
18.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
18.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
18.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
17.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
17.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
17.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
17.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
17.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
17.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
17.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
17.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
17.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
17.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
17.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
17.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
17.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
17.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
17.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
17.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
16.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
16.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
16.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
16.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
16.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
16.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
16.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
16.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
16.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
15.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
15.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
15.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
15.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
15.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
15.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
15.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
15.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
15.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
14.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
14.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
14.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
14.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
14.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
14.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
14.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
14.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
14.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
14.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
14.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
14.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
14.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
14.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
14.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
13.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
13.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
13.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
13.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
13.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
13.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
13.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
13.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
13.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
13.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
13.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
12.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
12.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
12.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
12.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
12.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
11.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
11.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
11.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
11.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
11.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
11.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
11.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
11.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
11.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
10.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
10.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
10.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
10.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
10.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
10.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
10.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
10.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
10.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
10.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
10.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
9.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
9.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
9.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
9.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
9.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
8.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
8.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
8.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
8.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
8.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
8.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
8.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
8.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
8.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
8.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
7.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
7.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
7.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
6.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
6.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
6.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
6.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
6.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
5.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
5.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
4.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
4.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
3.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
3.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
1.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
1.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012180003
Tumor
2.6
CPT0017850003
Tumor
1.8
CPT0001340003
Tumor
1.5
CPT0012670003
Tumor
1.4
CPT0076330003
Tumor
1.2
CPT0088690003
Tumor
1.2
CPT0012280003
Tumor
1.0
CPT0020120003
Tumor
1.0
CPT0007860003
Tumor
0.9
CPT0000640003
Tumor
0.9
CPT0023690003
Tumor
0.7
CPT0075130003
Tumor
0.6
CPT0086820003
Tumor
0.5
CPT0063630003
Tumor
0.5
CPT0025580004
Tumor
0.5
CPT0084560003
Tumor
0.5
CPT0075560003
Tumor
0.5
CPT0078930003
Tumor
0.3
CPT0092790003
Tumor
0.3
CPT0077490003
Tumor
0.3
CPT0065870003
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0086360003
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0002350011
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0089460004
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0069000003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0001260009
Tumor
0.0
CPT0009020003
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0078830003
Tumor
-0.2
CPT0088630003
Tumor
-0.2
CPT0001500009
Tumor
-0.2
CPT0077500001
Normal
-0.2
CPT0012080003
Tumor
-0.2
CPT0009080003
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0078660003
Tumor
-0.3
CPT0023710001
Normal
-0.3
CPT0089480003
Normal
-0.3
CPT0010110003
Tumor
-0.3
CPT0002370001
Normal
-0.4
CPT0088760003
Tumor
-0.4
CPT0088780001
Normal
-0.4
CPT0078840001
Normal
-0.4
CPT0001350001
Normal
-0.4
CPT0081600003
Tumor
-0.4
CPT0092800003
Normal
-0.4
CPT0077140001
Normal
-0.4
CPT0077110003
Tumor
-0.4
CPT0001510001
Normal
-0.4
CPT0084590001
Normal
-0.5
CPT0078940001
Normal
-0.5
CPT0081620001
Normal
-0.5
CPT0065820001
Normal
-0.5
CPT0088640003
Normal
-0.5
CPT0025610001
Normal
-0.5
CPT0012920003
Normal
-0.6
CPT0017450001
Normal
-0.6
CPT0088710001
Normal
-0.6
CPT0006950001
Normal
-0.7
CPT0001270001
Normal
-0.7
CPT0075170001
Normal
-0.7
CPT0007870001
Normal
-0.7
CPT0063640001
Normal
-0.7
CPT0012290003
Normal
-0.8
CPT0000660001
Normal
-0.9
CPT0018250001
Normal
-0.9
CPT0012640003
Normal
-0.9
CPT0012090003
Normal
-1.0
CPT0086830003
Normal
-1.2
CPT0069010001
Normal
-1.3
CPT0006900003
Tumor
-1.3
CPT0007470001
Normal
-1.4
CPT0075570001
Normal
-1.7
CPT0026410003
Tumor
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0063330001
Normal
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0019990003
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0088500001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0069160003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0023350003
Tumor
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0015910003
Tumor
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0077320001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0079410003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0086870003
Tumor
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
