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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NUDT8 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
100.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
95.3
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
90.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
89.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
78.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
67.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
64.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
62.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
59.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
58.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
58.4
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
58.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
55.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
55.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
55.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
52.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
52.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
52.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
51.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
50.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
50.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
50.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
49.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
48.4
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
46.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
46.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
46.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
45.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
45.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
44.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
44.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
42.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
41.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
41.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
40.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
39.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
39.7
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
38.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
38.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
37.8
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
37.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
37.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
37.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
35.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
35.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
35.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
35.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
34.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
34.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
33.9
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
33.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
33.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
33.0
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
32.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
32.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
32.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
32.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
32.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
32.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
32.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
31.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
31.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
31.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
31.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
31.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
31.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
31.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
30.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
30.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
30.8
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
30.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
30.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
30.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
29.9
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
29.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
28.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
28.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
28.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
28.2
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
27.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
27.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
27.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
27.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
26.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
26.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
26.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
25.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
25.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
25.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
25.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
25.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
25.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
25.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
25.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
25.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
25.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
25.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
25.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
25.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
25.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
25.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
25.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
24.8
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
24.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
24.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
23.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
23.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
23.6
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
23.5
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
23.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
23.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
23.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
23.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
23.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
23.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
22.5
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
22.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
22.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
22.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
22.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
21.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
21.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
21.8
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
21.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
21.5
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
21.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
21.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
21.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
21.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
21.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
21.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
21.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
21.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
20.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
20.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
20.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
19.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
19.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
19.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
19.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
19.7
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
19.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
19.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
19.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
19.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
19.2
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
19.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
18.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
18.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
18.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
18.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
18.6
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
18.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
18.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
18.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
18.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
18.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
18.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
18.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
17.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
17.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
17.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
17.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
17.4
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
17.4
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
17.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
17.3
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
17.2
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
17.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
17.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
17.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
17.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
17.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
16.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
16.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
16.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
16.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
16.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
16.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
16.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
16.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
16.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
16.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
16.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
16.3
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
16.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
16.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
16.2
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
16.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
16.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
16.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
16.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
16.0
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
15.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
15.9
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
15.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
15.7
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
15.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
15.5
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
15.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
15.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
15.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
15.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
15.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
14.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
14.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
14.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
14.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
14.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
14.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
14.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
14.5
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
14.4
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
14.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
14.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
14.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
14.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
14.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
14.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
14.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
14.0
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
14.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
13.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
13.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
13.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
13.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
13.2
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
13.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
12.9
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
12.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
12.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
12.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
12.6
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
12.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
12.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
12.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
12.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
12.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
12.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
12.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
12.3
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
12.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
12.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
11.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
11.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
11.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
11.7
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
11.6
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
11.6
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
11.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
11.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
11.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
11.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
11.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
11.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
11.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
11.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
11.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
11.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
11.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
11.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
10.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
10.9
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
10.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
10.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
10.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
10.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
10.6
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
10.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
10.5
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
10.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
10.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
10.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
10.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
10.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
10.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
10.2
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
10.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
10.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
10.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
10.1
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
10.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
10.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
10.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
10.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
9.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
9.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
9.6
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
9.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
9.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
9.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
9.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
9.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
9.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
9.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
9.2
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
9.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
9.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
9.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
8.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
8.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
8.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
8.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
8.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
8.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
8.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
8.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
8.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
8.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
8.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
8.5
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
8.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
8.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
8.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
8.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
8.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
8.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
8.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
8.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
7.9
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
7.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
7.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
7.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
7.7
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
7.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
7.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
7.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
7.5
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
7.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
7.3
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
7.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
7.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
7.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
7.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
7.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
7.1
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
7.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
6.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
6.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
6.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
6.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
6.3
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
6.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
6.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
6.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
5.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
5.9
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
5.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
5.7
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
5.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
5.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
5.4
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
5.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
4.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
4.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
4.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
4.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
4.4
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
4.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
4.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
3.9
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NUDT8 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.0
Number of samples
231
Samples
Sample
Description
TPM
DO50839
0 years, female, NA, stage:3, alive, 330 days
132.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
66.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
65.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
56.2
DO45217
0 years, female, NA, stage:3, dead, 270 days
50.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
46.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
44.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
44.4
DO227643
0 years, male, NA, stage:2, alive, 1260 days
43.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
41.8
DO48737
0 years, male, NA, stage:1, alive, 720 days
37.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
35.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
34.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
33.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
30.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
29.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
29.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
28.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
25.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
23.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
23.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
22.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
22.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
21.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
20.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
19.5
DO45197
0 years, male, NA, stage:2, alive, 1170 days
19.2
DO50829
0 years, male, NA, stage:3, alive, 570 days
18.4
DO50804
0 years, male, NA, stage:2, alive, 720 days
18.3
DO45093
0 years, male, NA, stage:2, dead, 720 days
18.1
DO45097
0 years, male, NA, stage:3, alive, 1620 days
18.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
17.8
DO45267
0 years, male, NA, stage:3, dead, 570 days
17.4
DO45163
0 years, male, NA, stage:2, alive, 960 days
17.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
16.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
16.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
15.8
DO23525
0 years, male, NA, stage:4, alive, 1050 days
15.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
15.6
DO23539
0 years, male, NA, stage:1, alive, 1110 days
15.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
15.1
DO45215
0 years, male, NA, stage:2, alive, 1170 days
14.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
14.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
14.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
14.6
DO45303
0 years, female, NA, stage:3, alive, 990 days
14.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
13.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
13.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
13.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
13.5
DO48721
0 years, female, NA, stage:1, alive, 900 days
13.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
13.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
13.0
DO50813
0 years, male, NA, stage:2, alive, 420 days
13.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
12.8
DO45125
0 years, male, NA, stage:3, alive, 1680 days
12.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
12.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
12.6
DO45149
0 years, female, NA, stage:2, alive, 1260 days
12.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
12.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
12.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
12.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
11.8
DO45235
0 years, female, NA, stage:1, alive, 900 days
11.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
11.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
11.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
11.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
11.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
11.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
11.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
10.8
DO45273
0 years, male, NA, stage:2, alive, 480 days
10.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
10.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
10.7
DO45105
0 years, male, NA, stage:1, alive, 1680 days
10.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
10.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
10.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
10.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
10.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
10.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
10.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
9.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
9.6
DO45153
0 years, female, NA, stage:2, alive, 1380 days
9.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
9.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
9.3
DO45111
0 years, male, NA, stage:2, alive, 1590 days
9.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
9.2
DO48693
0 years, male, NA, stage:2, alive, 900 days
9.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
9.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
8.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
8.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
8.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
8.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
8.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
8.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
8.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
8.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
8.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
8.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
8.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
8.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
8.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
8.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
7.7
DO48743
0 years, female, NA, stage:2, alive, 570 days
7.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
7.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
7.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
7.2
DO48757
0 years, female, NA, stage:3, alive, 480 days
7.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
7.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
7.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
7.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
7.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
6.9
DO45257
0 years, male, NA, stage:3, alive, 810 days
6.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
6.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
6.9
DO23517
0 years, male, NA, stage:2, alive, 1200 days
6.8
DO48697
0 years, female, NA, stage:2, dead, 810 days
6.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
6.7
DO48677
0 years, male, NA, stage:3, alive, 1140 days
6.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
6.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
6.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
6.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
6.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
6.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
6.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
6.3
DO45155
0 years, male, NA, stage:2, alive, 2160 days
6.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
6.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
6.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
6.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
6.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
6.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
6.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
6.0
DO45189
0 years, female, NA, stage:2, alive, 1200 days
5.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
5.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
5.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
5.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
5.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
5.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
5.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
5.4
DO50800
0 years, male, NA, stage:2, alive, 510 days
5.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
5.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
5.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
5.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
5.2
DO45137
0 years, male, NA, stage:1, alive, 1320 days
5.0
DO45201
0 years, male, NA, stage:1, alive, 900 days
5.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
5.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
5.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
4.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
4.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
4.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
4.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
4.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
4.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
4.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
4.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
4.8
DO45094
0 years, male, NA, stage:3, alive, 1650 days
4.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
4.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
4.7
DO45251
0 years, female, NA, stage:2, alive, 900 days
4.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
4.7
DO23533
0 years, male, NA, stage:2, alive, 900 days
4.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
4.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
4.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
4.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
4.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
4.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
4.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
4.4
DO50805
0 years, male, NA, stage:2, alive, 690 days
4.3
DO48695
0 years, male, NA, stage:2, alive, 720 days
4.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
4.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
4.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
4.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
4.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
3.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
3.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
3.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
3.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
3.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
3.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
3.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
3.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
3.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
3.5
DO45269
0 years, male, NA, stage:3, alive, 750 days
3.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
3.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
3.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
3.4
DO48742
0 years, male, NA, stage:2, alive, 600 days
3.4
DO23535
0 years, male, NA, stage:1, alive, 960 days
3.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
3.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
3.3
DO50822
0 years, male, NA, stage:2, alive, 510 days
3.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
3.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
3.2
DO48732
0 years, male, NA, stage:3, alive, 630 days
3.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
3.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
3.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
3.1
DO23530
0 years, male, NA, stage:4, dead, 180 days
2.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
2.9
DO45279
0 years, male, NA, stage:3, alive, 1290 days
2.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
2.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
2.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
2.8
DO23509
0 years, male, NA, stage:3, dead, 780 days
2.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
2.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
2.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
2.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
2.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
2.5
DO23510
0 years, female, NA, stage:2, alive, 870 days
2.4
DO23550
0 years, male, NA, stage:1, alive, 990 days
2.4
DO45145
0 years, male, NA, stage:3, dead, 60 days
2.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
2.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
1.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
1.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
1.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
1.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
1.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
1.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
1.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
0.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
911
Tumor
1.6
473
Tumor
1.3
915
Tumor
1.3
365
Tumor
1.2
513
Tumor
1.2
861
Tumor
1.1
648
Normal
1.1
1041
Tumor
1.0
741
Tumor
1.0
564
Normal
0.9
285
Tumor
0.9
873
Tumor
0.9
112
Tumor
0.8
952
Normal
0.8
494
Normal
0.8
474
Normal
0.7
1015
Tumor
0.7
698
Normal
0.7
727
Tumor
0.7
662
Normal
0.7
738
Normal
0.7
976
Normal
0.7
132
Normal
0.7
918
Normal
0.7
128
Normal
0.7
627
Tumor
0.7
883
Tumor
0.7
925
Tumor
0.6
865
Tumor
0.6
227
Tumor
0.6
127
Tumor
0.6
616
Normal
0.6
431
Tumor
0.6
228
Normal
0.6
278
Normal
0.6
618
Normal
0.6
554
Normal
0.6
162
Normal
0.6
361
Tumor
0.6
366
Normal
0.5
571
Tumor
0.5
465
Tumor
0.5
864
Normal
0.5
272
Normal
0.5
135
Tumor
0.5
286
Normal
0.5
862
Normal
0.5
388
Normal
0.5
258
Normal
0.5
955
Tumor
0.4
435
Tumor
0.4
664
Normal
0.4
314
Normal
0.4
462
Normal
0.4
171
Tumor
0.4
426
Normal
0.4
755
Tumor
0.4
1016
Normal
0.4
534
Normal
0.4
332
Normal
0.4
436
Normal
0.4
232
Normal
0.4
161
Tumor
0.4
816
Normal
0.4
446
Normal
0.4
214
Normal
0.4
824
Normal
0.4
172
Normal
0.4
123
Tumor
0.4
414
Normal
0.4
744
Normal
0.4
722
Normal
0.4
114
Normal
0.4
186
Normal
0.4
615
Tumor
0.3
432
Normal
0.3
428
Normal
0.3
423
Tumor
0.3
914
Normal
0.3
666
Normal
0.3
412
Normal
0.3
484
Normal
0.3
356
Normal
0.3
778
Normal
0.3
126
Normal
0.3
695
Tumor
0.3
376
Normal
0.3
267
Tumor
0.3
868
Normal
0.3
574
Normal
0.3
146
Normal
0.3
451
Tumor
0.3
665
Tumor
0.3
142
Normal
0.3
224
Normal
0.3
981
Tumor
0.3
635
Tumor
0.2
342
Normal
0.2
466
Normal
0.2
422
Normal
0.2
912
Normal
0.2
136
Normal
0.2
362
Normal
0.2
563
Tumor
0.2
138
Normal
0.2
452
Normal
0.2
424
Normal
0.2
396
Normal
0.2
363
Tumor
0.2
528
Normal
0.2
742
Normal
0.2
394
Normal
0.2
924
Normal
0.2
956
Normal
0.2
572
Normal
0.2
472
Normal
0.2
487
Tumor
0.2
1046
Normal
0.2
882
Normal
0.2
526
Normal
0.2
464
Normal
0.2
546
Normal
0.1
745
Tumor
0.1
785
Tumor
0.1
393
Tumor
0.1
723
Tumor
0.1
223
Tumor
0.1
866
Normal
0.1
124
Normal
0.1
867
Tumor
0.1
714
Normal
0.1
483
Tumor
0.1
268
Normal
0.1
222
Normal
0.1
444
Normal
0.1
434
Normal
0.1
328
Normal
0.1
518
Normal
0.1
858
Normal
0.1
672
Normal
0.1
926
Normal
0.1
966
Normal
0.1
148
Normal
0.1
368
Normal
0.1
746
Normal
0.1
212
Normal
0.1
944
Normal
0.1
298
Normal
0.1
874
Normal
0.1
823
Tumor
0.1
384
Normal
0.1
358
Normal
0.1
1026
Normal
0.1
488
Normal
0.1
877
Tumor
0.1
262
Normal
0.1
145
Tumor
0.0
786
Normal
0.0
111
Normal
0.0
696
Normal
0.0
686
Normal
0.0
922
Normal
0.0
411
Tumor
0.0
685
Tumor
0.0
756
Normal
0.0
558
Normal
0.0
642
Normal
0.0
536
Normal
0.0
884
Normal
0.0
636
Normal
0.0
386
Normal
0.0
713
Tumor
0.0
671
Tumor
0.0
716
Normal
0.0
477
Tumor
0.0
341
Tumor
0.0
481
Tumor
0.0
514
Normal
0.0
137
Tumor
0.0
448
Normal
0.0
482
Normal
0.0
113
Tumor
0.0
938
Normal
0.0
416
Normal
-0.1
1043
Tumor
-0.1
188
Normal
-0.1
954
Normal
-0.1
468
Normal
-0.1
392
Normal
-0.1
568
Normal
-0.1
1045
Tumor
-0.1
818
Normal
-0.1
641
Tumor
-0.1
277
Tumor
-0.1
471
Tumor
-0.1
344
Normal
-0.1
524
Normal
-0.1
1022
Normal
-0.1
352
Normal
-0.1
516
Normal
-0.1
857
Tumor
-0.1
141
Tumor
-0.1
312
Normal
-0.1
196
Normal
-0.1
1027
Tumor
-0.1
456
Normal
-0.1
982
Normal
-0.1
217
Tumor
-0.1
493
Tumor
-0.1
878
Normal
-0.1
218
Normal
-0.1
261
Tumor
-0.1
313
Tumor
-0.1
628
Normal
-0.1
964
Normal
-0.1
185
Tumor
-0.2
984
Normal
-0.2
728
Normal
-0.2
977
Tumor
-0.2
147
Tumor
-0.2
557
Tumor
-0.2
715
Tumor
-0.2
387
Tumor
-0.2
1025
Tumor
-0.2
721
Tumor
-0.2
647
Tumor
-0.2
354
Normal
-0.2
538
Normal
-0.2
515
Tumor
-0.2
537
Tumor
-0.2
1032
Normal
-0.2
852
Normal
-0.2
195
Tumor
-0.2
271
Tumor
-0.2
958
Normal
-0.2
284
Normal
-0.2
461
Tumor
-0.2
968
Normal
-0.2
463
Tumor
-0.3
221
Tumor
-0.3
364
Normal
-0.3
231
Tumor
-0.3
978
Normal
-0.3
357
Tumor
-0.3
1014
Normal
-0.3
1013
Tumor
-0.3
443
Tumor
-0.3
814
Normal
-0.3
937
Tumor
-0.3
413
Tumor
-0.3
517
Tumor
-0.3
1042
Normal
-0.3
491
Tumor
-0.3
553
Tumor
-0.3
433
Tumor
-0.3
257
Tumor
-0.3
415
Tumor
-0.3
383
Tumor
-0.3
187
Tumor
-0.4
953
Tumor
-0.4
975
Tumor
-0.4
1028
Normal
-0.4
923
Tumor
-0.4
533
Tumor
-0.4
192
Normal
-0.4
367
Tumor
-0.4
957
Tumor
-0.4
697
Tumor
-0.4
445
Tumor
-0.4
191
Tumor
-0.4
498
Normal
-0.4
455
Tumor
-0.4
921
Tumor
-0.4
916
Normal
-0.4
478
Normal
-0.4
125
Tumor
-0.4
421
Tumor
-0.4
331
Tumor
-0.4
1044
Normal
-0.5
492
Normal
-0.5
967
Tumor
-0.5
131
Tumor
-0.5
427
Tumor
-0.5
963
Tumor
-0.5
213
Tumor
-0.5
663
Tumor
-0.5
1021
Tumor
-0.5
617
Tumor
-0.5
815
Tumor
-0.5
881
Tumor
-0.5
395
Tumor
-0.5
913
Tumor
-0.6
523
Tumor
-0.6
813
Tumor
-0.6
327
Tumor
-0.6
737
Tumor
-0.6
297
Tumor
-0.6
983
Tumor
-0.6
525
Tumor
-0.6
425
Tumor
-0.6
917
Tumor
-0.6
817
Tumor
-0.6
965
Tumor
-0.6
743
Tumor
-0.6
447
Tumor
-0.7
724
Normal
-0.7
355
Tumor
-0.7
863
Tumor
-0.7
375
Tumor
-0.7
353
Tumor
-0.7
573
Tumor
-0.7
535
Tumor
-0.7
391
Tumor
-0.7
343
Tumor
-0.7
467
Tumor
-0.8
497
Tumor
-0.8
283
Tumor
-0.8
777
Tumor
-0.8
1031
Tumor
-0.8
351
Tumor
-0.8
943
Tumor
-0.8
527
Tumor
-0.8
851
Tumor
-0.8
545
Tumor
-1.0
951
Tumor
-1.0
567
Tumor
-1.0
385
Tumor
-1.0
311
Tumor
-1.0
211
Tumor
-1.2
661
Tumor
-1.2
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.