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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KRT80 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
67.1
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
65.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
48.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
44.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
32.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
27.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
23.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
19.7
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
18.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
14.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
12.3
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
11.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
10.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
8.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
8.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
7.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
7.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
7.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
6.7
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
6.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
5.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
5.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
5.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
5.6
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
5.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
5.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
5.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
4.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
4.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
4.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
4.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
3.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
3.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
3.5
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
3.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
3.2
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
2.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
2.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
2.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
2.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
2.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
2.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
1.8
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
1.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
1.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
1.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
1.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
1.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
1.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
1.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
1.5
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
1.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
1.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
1.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
1.4
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
1.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
1.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
1.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
1.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
1.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
1.3
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
1.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
1.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
1.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
1.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
1.2
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
1.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
1.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
1.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
1.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
1.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
1.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
1.1
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
1.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
1.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
1.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
1.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
1.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
1.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
0.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
0.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
0.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
0.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
0.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
0.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
0.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
0.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
0.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
0.7
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
0.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
0.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
0.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
0.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
0.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
0.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
0.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
0.6
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
0.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
0.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
0.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
0.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
0.5
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
0.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
0.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
0.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
0.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
0.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
0.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
0.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
0.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
0.4
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
0.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
0.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
0.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
0.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
0.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
0.4
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
0.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
0.4
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
0.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
0.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
0.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
0.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
0.3
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
0.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
0.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
0.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
0.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
0.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
0.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
0.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
0.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
0.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
0.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
0.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
0.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
0.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
0.3
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
0.3
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
0.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
0.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
0.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
0.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
0.3
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
0.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
0.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
0.2
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
0.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
0.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
0.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
0.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
0.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
0.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
0.2
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
0.2
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
0.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
0.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
0.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
0.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
0.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
0.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
0.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
0.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
0.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
0.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
0.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
0.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
0.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
0.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
0.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
0.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
0.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
0.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
0.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
0.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
0.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
0.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
0.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
0.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
0.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
0.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
0.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
0.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
0.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
0.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
0.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
0.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
0.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
0.1
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
0.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
0.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
0.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
0.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
0.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
0.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
0.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
0.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
0.1
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
0.1
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
0.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
0.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
0.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
0.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
0.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
0.1
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
0.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
0.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
0.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
0.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
0.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
0.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
0.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
0.1
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
0.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
0.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
0.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
0.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
0.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
0.1
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
0.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
0.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
0.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
0.1
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
0.1
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
0.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
0.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
0.1
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
0.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
0.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
0.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
0.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
0.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
0.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
0.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
0.1
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
0.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
0.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
0.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
0.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
0.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
0.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
0.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
0.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
0.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
0.1
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
0.1
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
0.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
0.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
0.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
0.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
0.1
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
0.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
0.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
0.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
0.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
0.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
0.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
0.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
0.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
0.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
0.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
0.0
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
0.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
0.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
0.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
0.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
0.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
0.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
0.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
0.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
0.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
0.0
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
0.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
0.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
0.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
0.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
0.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
0.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
0.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
0.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
0.0
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
0.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
0.0
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
0.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
0.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
0.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
0.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
0.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
0.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
0.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
0.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
0.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
0.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
0.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
0.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
0.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
0.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
0.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
0.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
0.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
0.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
0.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
0.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
0.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
0.0
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
0.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
0.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
0.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
0.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
0.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
0.0
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
0.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
0.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
0.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
0.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
0.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
0.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
0.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
0.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
0.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
0.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
0.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
0.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
0.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
0.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
0.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
0.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
0.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
0.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
0.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
0.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
0.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
0.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
0.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
0.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
0.0
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
0.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
0.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
0.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
0.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
0.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
0.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
0.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
0.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
0.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
0.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
0.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
0.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KRT80 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1.4
Number of samples
231
Samples
Sample
Description
TPM
DO45303
0 years, female, NA, stage:3, alive, 990 days
28.0
DO45249
0 years, male, NA, stage:1, alive, 630 days
23.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
23.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
20.9
DO45307
0 years, female, NA, stage:4, dead, 240 days
19.3
DO45305
0 years, male, NA, stage:4, alive, 300 days
18.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
15.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
13.2
DO45245
0 years, female, NA, stage:2, dead, 240 days
10.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
10.2
DO48732
0 years, male, NA, stage:3, alive, 630 days
9.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
9.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
8.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
6.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
6.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
5.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
5.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
4.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
4.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
3.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
3.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
3.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
3.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
3.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
3.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
3.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
2.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
2.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
2.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
2.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
2.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
2.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
2.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
2.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
1.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
1.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
1.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
1.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
1.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
1.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
1.3
DO45273
0 years, male, NA, stage:2, alive, 480 days
1.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
1.2
DO45119
0 years, male, NA, stage:3, dead, 510 days
1.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
1.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
0.9
DO50783
0 years, male, NA, stage:3, alive, 480 days
0.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
0.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
0.8
DO45157
0 years, male, NA, stage:2, alive, 1980 days
0.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
0.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
0.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
0.8
DO23515
0 years, male, NA, stage:2, alive, 1230 days
0.8
DO45213
0 years, male, NA, stage:1, alive, 1200 days
0.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
0.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
0.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
0.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
0.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
0.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
0.6
DO23546
0 years, male, NA, stage:2, alive, 1050 days
0.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
0.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
0.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
0.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
0.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
0.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
0.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
0.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
0.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
0.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
0.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
0.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
0.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
0.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
0.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
0.4
DO50805
0 years, male, NA, stage:2, alive, 690 days
0.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
0.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
0.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
0.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
0.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
0.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
0.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
0.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
0.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
0.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
0.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
0.3
DO45221
0 years, female, NA, stage:4, dead, 390 days
0.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
0.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
0.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
0.3
DO23551
0 years, male, NA, stage:3, dead, 150 days
0.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
0.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
0.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
0.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
0.2
DO50845
0 years, male, NA, stage:3, alive, 210 days
0.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
0.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
0.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
0.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
0.2
DO45223
0 years, male, NA, stage:4, alive, 1020 days
0.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
0.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
0.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
0.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
0.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
0.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
0.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
0.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
0.2
DO23511
0 years, female, NA, stage:3, dead, 180 days
0.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
0.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
0.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
0.2
DO45145
0 years, male, NA, stage:3, dead, 60 days
0.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
0.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
0.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
0.1
DO45215
0 years, male, NA, stage:2, alive, 1170 days
0.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
0.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
0.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
0.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
0.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
0.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
0.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
0.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
0.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
0.1
DO23540
0 years, male, NA, stage:1, alive, 750 days
0.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
0.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
0.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
0.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
0.1
DO23528
0 years, female, NA, stage:2, alive, 1020 days
0.1
DO48700
0 years, female, NA, stage:2, alive, 810 days
0.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
0.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
0.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
0.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
0.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
0.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
0.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
0.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
0.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
0.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
0.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
0.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
0.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
0.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
0.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
0.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
0.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
0.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
0.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
0.1
DO45091
0 years, male, NA, stage:2, dead, 1320 days
0.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
0.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
0.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
0.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
0.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
0.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
0.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
0.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
0.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
0.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
0.0
DO50807
0 years, male, NA, stage:1, alive, 540 days
0.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
0.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
0.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
0.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
0.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
0.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
0.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
0.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
0.0
DO50814
0 years, male, NA, stage:3, alive, 420 days
0.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
0.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
0.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
0.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
0.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
0.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
0.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
0.0
DO23513
0 years, male, NA, stage:3, alive, 1200 days
0.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
0.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
0.0
DO45201
0 years, male, NA, stage:1, alive, 900 days
0.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
0.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
0.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
0.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
0.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
0.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
0.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
0.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
0.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
0.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
0.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
0.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
0.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
0.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
0.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
0.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
0.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
0.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
0.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
0.0
DO48759
0 years, male, NA, stage:3, alive, 720 days
0.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
0.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
0.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
0.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
0.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
0.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
0.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
0.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
0.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
0.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
0.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
0.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
0.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
0.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
0.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
0.0
DO45117
0 years, female, NA, stage:2, dead, 1110 days
0.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
0.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
0.0
DO50789
0 years, female, NA, stage:2, alive, 570 days
0.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
0.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
0.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
0.0
DO23521
0 years, male, NA, stage:3, alive, 1110 days
0.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
1032
Normal
1.2
1025
Tumor
1.2
444
Normal
1.1
984
Normal
1.0
925
Tumor
1.0
535
Tumor
1.0
917
Tumor
1.0
477
Tumor
1.0
1014
Normal
1.0
982
Normal
0.9
685
Tumor
0.9
955
Tumor
0.9
1042
Normal
0.9
538
Normal
0.9
916
Normal
0.8
478
Normal
0.8
311
Tumor
0.8
978
Normal
0.8
944
Normal
0.8
958
Normal
0.8
954
Normal
0.8
715
Tumor
0.8
514
Normal
0.7
1022
Normal
0.7
864
Normal
0.7
852
Normal
0.7
722
Normal
0.7
1031
Tumor
0.7
268
Normal
0.7
868
Normal
0.7
873
Tumor
0.7
878
Normal
0.7
616
Normal
0.7
866
Normal
0.6
128
Normal
0.6
524
Normal
0.6
926
Normal
0.6
937
Tumor
0.6
721
Tumor
0.6
956
Normal
0.6
746
Normal
0.6
527
Tumor
0.6
697
Tumor
0.6
716
Normal
0.6
328
Normal
0.6
513
Tumor
0.6
536
Normal
0.6
284
Normal
0.6
136
Normal
0.6
1028
Normal
0.5
695
Tumor
0.5
558
Normal
0.5
627
Tumor
0.5
981
Tumor
0.5
314
Normal
0.5
938
Normal
0.5
278
Normal
0.5
744
Normal
0.5
367
Tumor
0.5
874
Normal
0.5
492
Normal
0.5
232
Normal
0.5
137
Tumor
0.5
362
Normal
0.5
554
Normal
0.5
424
Normal
0.5
135
Tumor
0.5
533
Tumor
0.5
918
Normal
0.4
714
Normal
0.4
416
Normal
0.4
983
Tumor
0.4
672
Normal
0.4
648
Normal
0.4
498
Normal
0.4
1026
Normal
0.4
572
Normal
0.4
126
Normal
0.4
664
Normal
0.4
261
Tumor
0.4
112
Tumor
0.4
977
Tumor
0.4
148
Normal
0.4
741
Tumor
0.4
231
Tumor
0.4
824
Normal
0.4
662
Normal
0.4
698
Normal
0.4
447
Tumor
0.4
686
Normal
0.4
534
Normal
0.4
1045
Tumor
0.4
428
Normal
0.4
1021
Tumor
0.4
364
Normal
0.4
696
Normal
0.4
745
Tumor
0.4
553
Tumor
0.4
423
Tumor
0.4
545
Tumor
0.4
188
Normal
0.4
474
Normal
0.3
312
Normal
0.3
966
Normal
0.3
728
Normal
0.3
952
Normal
0.3
395
Tumor
0.3
666
Normal
0.3
446
Normal
0.3
618
Normal
0.3
738
Normal
0.3
327
Tumor
0.3
975
Tumor
0.3
642
Normal
0.3
1027
Tumor
0.3
426
Normal
0.3
951
Tumor
0.3
671
Tumor
0.3
863
Tumor
0.3
363
Tumor
0.3
412
Normal
0.3
356
Normal
0.3
162
Normal
0.3
388
Normal
0.3
462
Normal
0.3
392
Normal
0.3
641
Tumor
0.3
817
Tumor
0.3
818
Normal
0.3
922
Normal
0.3
628
Normal
0.3
964
Normal
0.3
786
Normal
0.3
142
Normal
0.3
221
Tumor
0.3
127
Tumor
0.2
816
Normal
0.2
546
Normal
0.2
332
Normal
0.2
494
Normal
0.2
222
Normal
0.2
976
Normal
0.2
563
Tumor
0.2
465
Tumor
0.2
258
Normal
0.2
756
Normal
0.2
924
Normal
0.2
262
Normal
0.2
1046
Normal
0.2
413
Tumor
0.2
881
Tumor
0.2
443
Tumor
0.2
882
Normal
0.2
138
Normal
0.2
472
Normal
0.2
386
Normal
0.2
636
Normal
0.2
172
Normal
0.2
526
Normal
0.2
111
Normal
0.2
414
Normal
0.2
376
Normal
0.2
124
Normal
0.2
436
Normal
0.2
528
Normal
0.2
387
Tumor
0.2
394
Normal
0.2
564
Normal
0.1
214
Normal
0.1
884
Normal
0.1
1015
Tumor
0.1
851
Tumor
0.1
484
Normal
0.1
1044
Normal
0.1
515
Tumor
0.1
368
Normal
0.1
228
Normal
0.1
187
Tumor
0.1
1016
Normal
0.1
464
Normal
0.1
914
Normal
0.1
434
Normal
0.1
432
Normal
0.1
518
Normal
0.1
968
Normal
0.1
448
Normal
0.1
212
Normal
0.1
471
Tumor
0.1
574
Normal
0.1
452
Normal
0.1
132
Normal
0.1
723
Tumor
0.1
352
Normal
0.1
516
Normal
0.1
146
Normal
0.1
615
Tumor
0.1
778
Normal
0.1
921
Tumor
0.1
957
Tumor
0.1
742
Normal
0.0
384
Normal
0.0
466
Normal
0.0
755
Tumor
0.0
358
Normal
0.0
123
Tumor
0.0
433
Tumor
0.0
114
Normal
0.0
224
Normal
0.0
482
Normal
0.0
468
Normal
0.0
665
Tumor
0.0
617
Tumor
0.0
491
Tumor
0.0
737
Tumor
0.0
422
Normal
0.0
298
Normal
0.0
131
Tumor
0.0
391
Tumor
0.0
635
Tumor
0.0
488
Normal
0.0
393
Tumor
0.0
396
Normal
0.0
113
Tumor
0.0
365
Tumor
0.0
171
Tumor
0.0
286
Normal
0.0
724
Normal
-0.1
912
Normal
-0.1
195
Tumor
-0.1
867
Tumor
-0.1
272
Normal
-0.1
415
Tumor
-0.1
196
Normal
-0.1
192
Normal
-0.1
344
Normal
-0.1
186
Normal
-0.1
923
Tumor
-0.1
568
Normal
-0.1
861
Tumor
-0.1
467
Tumor
-0.1
858
Normal
-0.1
862
Normal
-0.1
354
Normal
-0.1
456
Normal
-0.1
451
Tumor
-0.2
857
Tumor
-0.2
341
Tumor
-0.2
913
Tumor
-0.2
145
Tumor
-0.2
297
Tumor
-0.2
557
Tumor
-0.2
911
Tumor
-0.2
777
Tumor
-0.2
425
Tumor
-0.2
943
Tumor
-0.2
785
Tumor
-0.2
815
Tumor
-0.2
481
Tumor
-0.2
713
Tumor
-0.2
571
Tumor
-0.3
217
Tumor
-0.3
185
Tumor
-0.3
257
Tumor
-0.3
331
Tumor
-0.3
218
Normal
-0.3
385
Tumor
-0.3
573
Tumor
-0.3
823
Tumor
-0.3
461
Tumor
-0.3
1041
Tumor
-0.3
361
Tumor
-0.3
271
Tumor
-0.3
191
Tumor
-0.3
342
Normal
-0.4
213
Tumor
-0.4
915
Tumor
-0.4
497
Tumor
-0.4
877
Tumor
-0.4
267
Tumor
-0.4
125
Tumor
-0.4
1043
Tumor
-0.4
493
Tumor
-0.4
883
Tumor
-0.4
963
Tumor
-0.5
353
Tumor
-0.5
814
Normal
-0.5
147
Tumor
-0.5
1013
Tumor
-0.5
355
Tumor
-0.5
455
Tumor
-0.5
523
Tumor
-0.5
473
Tumor
-0.5
375
Tumor
-0.5
277
Tumor
-0.6
366
Normal
-0.6
965
Tumor
-0.6
421
Tumor
-0.6
661
Tumor
-0.6
141
Tumor
-0.6
647
Tumor
-0.6
483
Tumor
-0.6
383
Tumor
-0.6
537
Tumor
-0.7
663
Tumor
-0.7
517
Tumor
-0.7
427
Tumor
-0.7
567
Tumor
-0.7
865
Tumor
-0.7
727
Tumor
-0.7
487
Tumor
-0.8
357
Tumor
-0.8
967
Tumor
-0.8
813
Tumor
-0.8
351
Tumor
-0.9
285
Tumor
-0.9
525
Tumor
-0.9
463
Tumor
-0.9
431
Tumor
-0.9
313
Tumor
-1.0
227
Tumor
-1.0
343
Tumor
-1.0
435
Tumor
-1.0
953
Tumor
-1.1
161
Tumor
-1.1
411
Tumor
-1.1
445
Tumor
-1.1
743
Tumor
-1.1
223
Tumor
-1.1
211
Tumor
-1.2
283
Tumor
-1.3
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.