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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CYB5D2 is validated prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
42.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
39.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
35.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
34.6
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
34.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
33.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
31.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
31.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
31.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
30.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
30.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
29.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
28.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
28.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
27.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
27.8
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
27.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
26.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
25.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
25.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
25.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
24.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
24.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
23.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
23.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
22.5
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
22.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
22.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
22.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
22.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
21.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
21.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
21.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
20.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
20.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
20.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
20.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
20.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
19.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
19.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
19.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
19.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
19.4
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
19.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
19.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
19.1
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
19.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
18.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
18.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
18.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
18.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
18.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
18.3
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
18.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
18.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
18.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
18.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
18.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
17.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
17.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
17.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
17.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
17.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
17.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
17.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
17.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
16.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
16.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
16.8
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
16.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
16.5
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
16.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
16.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
16.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
16.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
15.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
15.8
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
15.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
15.7
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
15.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
15.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
15.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
15.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
15.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
14.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
14.9
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
14.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
14.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
14.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
14.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
14.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
14.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
14.5
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
14.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
14.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
14.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
14.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
14.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
14.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
14.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
14.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
14.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
13.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
13.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
13.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
13.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
13.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
13.8
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
13.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
13.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
13.7
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
13.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
13.2
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
13.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
13.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
13.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
13.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
13.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
12.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
12.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
12.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
12.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
12.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
12.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
12.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
12.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
12.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
12.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
12.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
12.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
12.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
12.1
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
12.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
12.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
12.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
12.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
12.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
12.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
11.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
11.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
11.8
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
11.7
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
11.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
11.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
11.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
11.6
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
11.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
11.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
11.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
11.3
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
11.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
11.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
11.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
11.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
10.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
10.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
10.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
10.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
10.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
10.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
10.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
10.6
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
10.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
10.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
10.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
10.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
10.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
10.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
10.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
10.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
10.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
10.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
10.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
10.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
10.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
10.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
10.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
10.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
10.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
10.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
10.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
10.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
10.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
10.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
10.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
9.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
9.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
9.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
9.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
9.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
9.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
9.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
9.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
9.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
9.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
9.6
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
9.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
9.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
9.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
9.5
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
9.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
9.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
9.3
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
9.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
9.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
9.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
9.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
9.2
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
9.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
9.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
9.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
9.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
9.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
8.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
8.9
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
8.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
8.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
8.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
8.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
8.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
8.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
8.5
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
8.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
8.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
8.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
8.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
8.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
8.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
8.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
8.3
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
8.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
8.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
8.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
8.2
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
8.2
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
8.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
8.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
8.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
8.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
8.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
8.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
7.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
7.9
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
7.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
7.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
7.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
7.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
7.6
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
7.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
7.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
7.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
7.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
7.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
7.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
7.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
7.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
7.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
7.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
7.2
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
7.2
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
7.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
7.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
7.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
7.1
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
7.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
7.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
7.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
7.0
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
6.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
6.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
6.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
6.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
6.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
6.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
6.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
6.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
6.7
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
6.7
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
6.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
6.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
6.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
6.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
6.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
6.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
6.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
6.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
6.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
6.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
6.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
6.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
6.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
6.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
6.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
6.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
6.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
6.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
6.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
6.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
6.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
6.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
5.9
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
5.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
5.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
5.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
5.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
5.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
5.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
5.6
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
5.5
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
5.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
5.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
5.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
5.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
5.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
5.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
5.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
5.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
5.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
5.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
5.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
5.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
5.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
5.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
5.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
5.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
4.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
4.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
4.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
4.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
4.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
4.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
4.6
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
4.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.5
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
4.5
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
4.4
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
4.4
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
4.3
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
4.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
4.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
4.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
4.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
4.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
4.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
4.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
3.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
3.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
3.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
3.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
3.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
3.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
3.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
3.3
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
3.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
2.5
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
2.5
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
2.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
2.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
2.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CYB5D2 is validated prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.6
Number of samples
231
Samples
Sample
Description
TPM
DO48719
0 years, male, NA, stage:2, alive, 690 days
41.2
DO48695
0 years, male, NA, stage:2, alive, 720 days
33.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
33.6
DO48677
0 years, male, NA, stage:3, alive, 1140 days
32.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
32.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
32.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
30.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
29.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
28.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
28.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
26.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
26.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
26.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
25.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
25.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
24.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
24.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
24.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
22.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
22.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
21.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
21.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
20.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
20.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
20.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
20.1
DO45129
0 years, male, NA, stage:3, alive, 1470 days
19.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
19.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
19.2
DO45121
0 years, male, NA, stage:3, alive, 1530 days
18.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
18.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
18.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
17.9
DO48736
0 years, female, NA, stage:1, alive, 600 days
17.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
16.9
DO50783
0 years, male, NA, stage:3, alive, 480 days
16.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
16.9
DO48741
0 years, male, NA, stage:3, alive, 240 days
16.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
16.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
16.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
16.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
16.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
16.4
DO50800
0 years, male, NA, stage:2, alive, 510 days
16.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
15.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
15.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
15.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
15.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
15.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
15.4
DO45107
0 years, female, NA, stage:2, alive, 1710 days
15.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
15.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
14.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
14.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
14.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
14.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
14.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
14.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
14.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
13.9
DO45285
0 years, male, NA, stage:3, alive, 480 days
13.8
DO50806
0 years, male, NA, stage:4, alive, 540 days
13.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
13.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
13.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
13.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
13.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
12.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
12.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
12.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
12.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
12.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
12.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
12.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
12.6
DO45253
0 years, male, NA, stage:2, alive, 870 days
12.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
12.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
12.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
12.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
12.3
DO45155
0 years, male, NA, stage:2, alive, 2160 days
12.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
12.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
12.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
11.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
11.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
11.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
11.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
11.7
DO45189
0 years, female, NA, stage:2, alive, 1200 days
11.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
11.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
11.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
11.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
11.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
11.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
11.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
11.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
11.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
11.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
11.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
11.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
10.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
10.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
10.8
DO23531
0 years, female, NA, stage:3, alive, 900 days
10.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
10.7
DO45301
0 years, male, NA, stage:2, dead, 1440 days
10.6
DO45153
0 years, female, NA, stage:2, alive, 1380 days
10.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
10.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
10.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
10.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
10.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
10.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
10.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
10.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
10.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
10.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
10.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
10.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
9.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
9.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
9.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
9.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
9.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
9.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
9.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
9.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
9.5
DO45123
0 years, female, NA, stage:2, dead, 570 days
9.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
9.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
9.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
9.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
9.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
9.1
DO45245
0 years, female, NA, stage:2, dead, 240 days
9.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
9.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
9.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
9.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
9.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
8.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
8.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
8.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
8.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
8.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
8.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
8.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
8.3
DO45235
0 years, female, NA, stage:1, alive, 900 days
8.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
8.2
DO45137
0 years, male, NA, stage:1, alive, 1320 days
8.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
8.1
DO23521
0 years, male, NA, stage:3, alive, 1110 days
8.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
8.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
8.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
8.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
7.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
7.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
7.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
7.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
7.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
7.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
7.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
7.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
7.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
7.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
7.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
7.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
7.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
7.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
7.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
7.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
7.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
7.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
7.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
6.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
6.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
6.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
6.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
6.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
6.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
6.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
6.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
6.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
6.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
6.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
6.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
6.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
6.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
6.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
6.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
6.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
5.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
5.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
5.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
5.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
5.8
DO48693
0 years, male, NA, stage:2, alive, 900 days
5.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
5.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
5.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
5.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
5.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
5.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
5.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
5.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
5.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
5.1
DO45091
0 years, male, NA, stage:2, dead, 1320 days
5.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
5.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
5.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
5.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
4.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
4.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
4.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
4.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
4.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
4.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
4.5
DO45269
0 years, male, NA, stage:3, alive, 750 days
4.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
4.3
DO45093
0 years, male, NA, stage:2, dead, 720 days
4.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
4.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
4.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
4.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
3.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
3.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
3.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
3.6
DO23518
0 years, male, NA, stage:2, alive, 1320 days
3.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
3.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
3.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
2.8
DO45193
0 years, female, NA, stage:4, dead, 120 days
2.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
2.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
571
Tumor
1.3
525
Tumor
1.3
573
Tumor
1.0
912
Normal
0.8
914
Normal
0.7
527
Tumor
0.7
884
Normal
0.7
572
Normal
0.7
882
Normal
0.7
911
Tumor
0.6
727
Tumor
0.6
862
Normal
0.6
568
Normal
0.6
786
Normal
0.6
567
Tumor
0.6
515
Tumor
0.6
517
Tumor
0.5
917
Tumor
0.5
878
Normal
0.5
864
Normal
0.5
557
Tumor
0.5
877
Tumor
0.5
563
Tumor
0.5
232
Normal
0.4
866
Normal
0.4
574
Normal
0.4
714
Normal
0.4
686
Normal
0.4
756
Normal
0.4
722
Normal
0.4
231
Tumor
0.4
564
Normal
0.3
868
Normal
0.3
648
Normal
0.3
724
Normal
0.3
558
Normal
0.3
662
Normal
0.3
537
Tumor
0.3
716
Normal
0.3
918
Normal
0.2
746
Normal
0.2
713
Tumor
0.2
696
Normal
0.2
741
Tumor
0.2
672
Normal
0.2
738
Normal
0.2
666
Normal
0.2
533
Tumor
0.2
516
Normal
0.2
715
Tumor
0.1
721
Tumor
0.1
728
Normal
0.1
915
Tumor
0.1
258
Normal
0.1
814
Normal
0.1
723
Tumor
0.1
863
Tumor
0.1
685
Tumor
0.1
262
Normal
0.0
546
Normal
0.0
526
Normal
0.0
874
Normal
0.0
268
Normal
0.0
272
Normal
0.0
528
Normal
0.0
538
Normal
0.0
913
Tumor
0.0
743
Tumor
0.0
261
Tumor
0.0
742
Normal
0.0
257
Tumor
0.0
267
Tumor
0.0
665
Tumor
0.0
778
Normal
-0.1
695
Tumor
-0.1
513
Tumor
-0.1
514
Normal
-0.1
881
Tumor
-0.1
524
Normal
-0.1
813
Tumor
-0.1
744
Normal
-0.2
554
Normal
-0.2
883
Tumor
-0.2
663
Tumor
-0.2
271
Tumor
-0.2
664
Normal
-0.2
737
Tumor
-0.2
926
Normal
-0.2
865
Tumor
-0.3
922
Normal
-0.3
545
Tumor
-0.4
745
Tumor
-0.4
873
Tumor
-0.4
523
Tumor
-0.4
755
Tumor
-0.5
777
Tumor
-0.5
867
Tumor
-0.5
518
Normal
-0.5
671
Tumor
-0.6
916
Normal
-0.6
661
Tumor
-0.6
785
Tumor
-0.7
921
Tumor
-0.7
647
Tumor
-0.7
924
Normal
-0.7
553
Tumor
-0.8
534
Normal
-0.8
923
Tumor
-1.0
861
Tumor
-1.0
925
Tumor
-1.0
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
352
Normal
N/A
473
Tumor
N/A
111
Normal
N/A
353
Tumor
N/A
474
Normal
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
483
Tumor
N/A
363
Tumor
N/A
484
Normal
N/A
364
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
487
Tumor
N/A
125
Tumor
N/A
367
Tumor
N/A
488
Normal
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
131
Tumor
N/A
494
Normal
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
497
Tumor
N/A
135
Tumor
N/A
498
Normal
N/A
136
Normal
N/A
137
Tumor
N/A
138
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
937
Tumor
N/A
817
Tumor
N/A
938
Normal
N/A
818
Normal
N/A
141
Tumor
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
145
Tumor
N/A
387
Tumor
N/A
146
Normal
N/A
388
Normal
N/A
147
Tumor
N/A
148
Normal
N/A
943
Tumor
N/A
823
Tumor
N/A
944
Normal
N/A
824
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
392
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
1016
Normal
N/A
278
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
951
Tumor
N/A
1013
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
955
Tumor
N/A
956
Normal
N/A
957
Tumor
N/A
958
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
963
Tumor
N/A
964
Normal
N/A
965
Tumor
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
977
Tumor
N/A
615
Tumor
N/A
857
Tumor
N/A
978
Normal
N/A
616
Normal
N/A
858
Normal
N/A
617
Tumor
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
981
Tumor
N/A
982
Normal
N/A
983
Tumor
N/A
984
Normal
N/A
1046
Normal
N/A
1045
Tumor
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
635
Tumor
N/A
636
Normal
N/A
641
Tumor
N/A
642
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
413
Tumor
N/A
414
Normal
N/A
535
Tumor
N/A
415
Tumor
N/A
536
Normal
N/A
416
Normal
N/A
421
Tumor
N/A
422
Normal
N/A
423
Tumor
N/A
424
Normal
N/A
425
Tumor
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
431
Tumor
N/A
311
Tumor
N/A
432
Normal
N/A
312
Normal
N/A
433
Tumor
N/A
313
Tumor
N/A
434
Normal
N/A
314
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
443
Tumor
N/A
444
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
447
Tumor
N/A
327
Tumor
N/A
448
Normal
N/A
328
Normal
N/A
451
Tumor
N/A
331
Tumor
N/A
452
Normal
N/A
211
Tumor
N/A
332
Normal
N/A
212
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
342
Normal
N/A
463
Tumor
N/A
222
Normal
N/A
343
Tumor
N/A
464
Normal
N/A
223
Tumor
N/A
344
Normal
N/A
465
Tumor
N/A
224
Normal
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
