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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GLOD4 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
87.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
77.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
68.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
66.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
63.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
60.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
58.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
56.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
55.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
55.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
54.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
52.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
50.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
49.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
48.6
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
48.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
47.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
46.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
45.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
45.3
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
45.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
44.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
44.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
44.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
43.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
43.1
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
42.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
42.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
42.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
42.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
41.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
41.4
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
41.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
41.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
41.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
40.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
40.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
40.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
40.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
39.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
39.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
39.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
39.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
38.7
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
38.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
38.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
38.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
38.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
38.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
38.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
37.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
37.6
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
37.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
37.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
36.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
36.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
36.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
36.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
35.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
35.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
35.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
34.9
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
34.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
34.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
34.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
34.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
34.4
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
34.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
33.9
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
33.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
33.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
32.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
32.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
32.9
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
32.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
32.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
32.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
31.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
31.8
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
31.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
31.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
31.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
31.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
31.3
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
31.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
30.9
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
30.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
30.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
30.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
30.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
30.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
30.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
30.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
30.1
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
29.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
29.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
29.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
29.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
28.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
28.8
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
28.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
28.7
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
28.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
28.5
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
28.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
28.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
28.4
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
28.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
28.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
27.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
27.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
27.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
27.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
27.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
27.6
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
27.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
27.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
27.3
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
27.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
27.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
26.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
26.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
26.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
26.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
26.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
26.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
26.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
26.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
26.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
26.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
26.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
25.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
25.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
25.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
25.7
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
25.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
25.6
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
25.3
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
25.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
25.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
25.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
25.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
24.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
24.9
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
24.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
24.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
24.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
24.3
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
24.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
24.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
24.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
24.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
23.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
23.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
23.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
23.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
23.3
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
23.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
23.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
23.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
23.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
23.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
23.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
23.1
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
23.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
23.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
22.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
22.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
22.8
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
22.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
22.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
22.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
22.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
22.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
22.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
22.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
22.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
22.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
22.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
22.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
22.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
22.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
22.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
21.9
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
21.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
21.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
21.5
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
21.5
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
21.4
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
21.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
20.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
20.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
20.8
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
20.8
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
20.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
20.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
20.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
20.6
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
20.6
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
20.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
20.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
20.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
20.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
19.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
19.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
19.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
19.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
19.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
19.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
19.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
19.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
19.5
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
19.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
19.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
19.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
19.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
19.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
19.2
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
18.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
18.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
18.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
18.8
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
18.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
18.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
18.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
18.2
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
18.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
18.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
18.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
18.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
17.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
17.9
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
17.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
17.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
17.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
17.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
17.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
17.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
17.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
17.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
16.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
16.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
16.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
16.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
16.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
16.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
16.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
16.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
16.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
16.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
16.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
16.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
16.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
16.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
16.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
15.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
15.7
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
15.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
15.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
15.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
15.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
15.6
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
15.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
15.6
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
15.4
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
15.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
15.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
15.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
15.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
15.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
15.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
15.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
15.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
15.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
15.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
15.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
15.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
14.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
14.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
14.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
14.8
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
14.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
14.8
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
14.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
14.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
14.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
14.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
14.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
14.4
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
14.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
14.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
14.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
14.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
14.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
14.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
14.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
13.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
13.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
13.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
13.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
13.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
13.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
13.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
13.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
13.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
13.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
12.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
12.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
12.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
12.8
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
12.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
12.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
12.5
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
12.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
12.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
12.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
12.0
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
12.0
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
12.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
11.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
11.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
11.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
11.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
11.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
11.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
11.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
11.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
11.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
11.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
10.9
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
10.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
10.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
10.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
10.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
10.8
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
10.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
10.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
10.1
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
9.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
9.8
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
9.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
9.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
9.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
9.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
9.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
9.4
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
9.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
9.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
9.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
9.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
8.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
8.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
8.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
8.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
7.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
6.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
6.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
6.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
5.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
5.8
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GLOD4 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.1
Number of samples
231
Samples
Sample
Description
TPM
DO45227
0 years, female, NA, stage:2, alive, 1020 days
83.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
71.0
DO45303
0 years, female, NA, stage:3, alive, 990 days
56.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
52.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
48.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
46.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
46.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
44.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
43.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
42.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
42.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
42.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
41.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
40.9
DO45119
0 years, male, NA, stage:3, dead, 510 days
40.4
DO45179
0 years, female, NA, stage:2, alive, 600 days
40.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
40.2
DO45096
0 years, male, NA, stage:2, dead, 1290 days
39.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
38.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
38.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
38.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
38.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
37.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
36.7
DO45307
0 years, female, NA, stage:4, dead, 240 days
36.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
35.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
35.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
35.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
35.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
34.7
DO45257
0 years, male, NA, stage:3, alive, 810 days
34.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
33.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
33.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
32.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
32.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
32.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
32.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
32.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
31.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
31.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
30.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
30.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
30.7
DO48677
0 years, male, NA, stage:3, alive, 1140 days
30.7
DO48757
0 years, female, NA, stage:3, alive, 480 days
30.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
29.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
29.8
DO23516
0 years, male, NA, stage:3, dead, 20 days
29.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
28.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
28.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
28.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
28.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
28.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
28.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
28.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
28.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
27.9
DO45101
0 years, male, NA, stage:2, alive, 1680 days
27.9
DO45247
0 years, female, NA, stage:2, alive, 210 days
27.7
DO45203
0 years, female, NA, stage:2, alive, 1170 days
27.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
27.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
27.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
27.2
DO45103
0 years, male, NA, stage:3, alive, 450 days
26.9
DO50804
0 years, male, NA, stage:2, alive, 720 days
26.8
DO45231
0 years, male, NA, stage:2, alive, 930 days
26.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
26.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
26.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
26.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
26.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
25.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
25.7
DO45094
0 years, male, NA, stage:3, alive, 1650 days
25.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
25.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
25.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
25.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
25.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
24.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
24.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
24.6
DO50778
0 years, male, NA, stage:4, alive, 630 days
24.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
24.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
24.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
24.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
24.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
24.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
24.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
23.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
23.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
23.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
23.4
DO45107
0 years, female, NA, stage:2, alive, 1710 days
23.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
23.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
23.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
23.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
23.0
DO48697
0 years, female, NA, stage:2, dead, 810 days
23.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
22.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
22.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
22.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
22.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
22.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
22.2
DO48672
0 years, male, NA, stage:2, alive, 450 days
22.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
21.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
21.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
21.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
21.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
21.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
21.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
21.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
21.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
21.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
21.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
21.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
21.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
21.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
20.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
20.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
20.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
20.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
20.7
DO45255
0 years, male, NA, stage:3, alive, 720 days
20.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
20.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
20.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
20.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
20.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
20.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
20.2
DO45115
0 years, male, NA, stage:2, alive, 840 days
20.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
20.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
20.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
19.7
DO23544
0 years, male, NA, stage:2, alive, 960 days
19.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
19.7
DO45239
0 years, male, NA, stage:2, alive, 870 days
19.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
19.5
DO50817
0 years, male, NA, stage:2, alive, 390 days
19.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
19.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
19.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
19.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
18.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
18.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
18.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
18.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
18.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
18.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
18.5
DO50793
0 years, male, NA, stage:4, alive, 540 days
18.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
18.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
18.3
DO45213
0 years, male, NA, stage:1, alive, 1200 days
18.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
17.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
17.7
DO48730
0 years, female, NA, stage:2, alive, 630 days
17.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
17.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
17.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
17.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
17.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
17.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
17.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
17.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
17.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
17.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
17.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
16.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
16.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
16.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
16.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
16.3
DO45123
0 years, female, NA, stage:2, dead, 570 days
16.2
DO45243
0 years, female, NA, stage:3, alive, 930 days
16.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
16.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
16.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
15.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
15.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
15.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
15.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
15.2
DO48741
0 years, male, NA, stage:3, alive, 240 days
15.1
DO48733
0 years, male, NA, stage:2, alive, 600 days
15.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
14.9
DO23517
0 years, male, NA, stage:2, alive, 1200 days
14.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
14.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
14.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
14.2
DO23543
0 years, male, NA, stage:2, alive, 1020 days
14.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
14.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
14.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
13.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
13.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
13.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
13.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
13.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
13.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
13.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
13.5
DO45093
0 years, male, NA, stage:2, dead, 720 days
13.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
13.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
13.3
DO45187
0 years, female, NA, stage:1, alive, 1260 days
13.3
DO50798
0 years, male, NA, stage:3, dead, 30 days
13.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
13.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
13.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
13.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
13.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
12.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
12.9
DO48727
0 years, female, NA, stage:2, dead, 390 days
12.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
12.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
12.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
12.3
DO50789
0 years, female, NA, stage:2, alive, 570 days
12.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
12.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
11.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
11.7
DO50832
0 years, male, NA, stage:3, alive, 90 days
11.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
11.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
11.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
11.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
10.9
DO50814
0 years, male, NA, stage:3, alive, 420 days
10.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
10.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
10.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
10.6
DO45149
0 years, female, NA, stage:2, alive, 1260 days
10.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
9.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
8.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
8.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
8.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
6.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
473
Tumor
1.6
342
Normal
0.8
131
Tumor
0.7
698
Normal
0.7
738
Normal
0.7
746
Normal
0.6
755
Tumor
0.6
938
Normal
0.6
742
Normal
0.6
466
Normal
0.6
955
Tumor
0.6
516
Normal
0.6
484
Normal
0.6
862
Normal
0.6
778
Normal
0.5
714
Normal
0.5
482
Normal
0.5
416
Normal
0.5
756
Normal
0.5
924
Normal
0.5
952
Normal
0.5
546
Normal
0.5
912
Normal
0.5
1022
Normal
0.5
981
Tumor
0.5
364
Normal
0.5
412
Normal
0.5
723
Tumor
0.5
715
Tumor
0.5
518
Normal
0.5
915
Tumor
0.5
222
Normal
0.5
1032
Normal
0.5
858
Normal
0.5
472
Normal
0.5
436
Normal
0.4
356
Normal
0.4
534
Normal
0.4
298
Normal
0.4
162
Normal
0.4
818
Normal
0.4
966
Normal
0.4
414
Normal
0.4
958
Normal
0.4
716
Normal
0.4
1046
Normal
0.4
186
Normal
0.4
462
Normal
0.4
514
Normal
0.4
172
Normal
0.4
695
Tumor
0.4
1026
Normal
0.4
882
Normal
0.4
744
Normal
0.4
722
Normal
0.4
728
Normal
0.4
448
Normal
0.4
528
Normal
0.4
786
Normal
0.4
488
Normal
0.4
128
Normal
0.4
196
Normal
0.4
868
Normal
0.4
1043
Tumor
0.3
261
Tumor
0.3
426
Normal
0.3
824
Normal
0.3
878
Normal
0.3
553
Tumor
0.3
696
Normal
0.3
212
Normal
0.3
422
Normal
0.3
358
Normal
0.3
474
Normal
0.3
864
Normal
0.3
956
Normal
0.3
817
Tumor
0.3
494
Normal
0.3
228
Normal
0.3
944
Normal
0.3
1042
Normal
0.3
616
Normal
0.3
968
Normal
0.3
394
Normal
0.3
1041
Tumor
0.3
743
Tumor
0.3
964
Normal
0.3
926
Normal
0.3
452
Normal
0.3
124
Normal
0.3
554
Normal
0.3
1044
Normal
0.3
354
Normal
0.3
1014
Normal
0.3
272
Normal
0.3
278
Normal
0.3
1031
Tumor
0.3
111
Normal
0.3
957
Tumor
0.3
922
Normal
0.3
286
Normal
0.3
884
Normal
0.3
664
Normal
0.3
978
Normal
0.3
877
Tumor
0.3
618
Normal
0.3
686
Normal
0.3
874
Normal
0.3
456
Normal
0.3
392
Normal
0.2
363
Tumor
0.2
114
Normal
0.2
954
Normal
0.2
386
Normal
0.2
344
Normal
0.2
428
Normal
0.2
424
Normal
0.2
982
Normal
0.2
1016
Normal
0.2
976
Normal
0.2
914
Normal
0.2
918
Normal
0.2
816
Normal
0.2
376
Normal
0.2
984
Normal
0.2
148
Normal
0.2
136
Normal
0.2
214
Normal
0.2
312
Normal
0.2
232
Normal
0.2
921
Tumor
0.2
425
Tumor
0.2
721
Tumor
0.2
327
Tumor
0.2
218
Normal
0.2
126
Normal
0.2
432
Normal
0.2
258
Normal
0.2
146
Normal
0.2
284
Normal
0.2
916
Normal
0.2
464
Normal
0.2
478
Normal
0.2
852
Normal
0.2
526
Normal
0.2
873
Tumor
0.2
328
Normal
0.1
138
Normal
0.1
388
Normal
0.1
568
Normal
0.1
366
Normal
0.1
648
Normal
0.1
572
Normal
0.1
1028
Normal
0.1
975
Tumor
0.1
492
Normal
0.1
132
Normal
0.1
352
Normal
0.1
628
Normal
0.1
741
Tumor
0.1
142
Normal
0.1
564
Normal
0.1
558
Normal
0.1
285
Tumor
0.1
224
Normal
0.1
524
Normal
0.1
815
Tumor
0.1
662
Normal
0.1
141
Tumor
0.1
642
Normal
0.1
498
Normal
0.0
727
Tumor
0.0
332
Normal
0.0
362
Normal
0.0
666
Normal
0.0
468
Normal
0.0
536
Normal
0.0
262
Normal
0.0
314
Normal
0.0
188
Normal
0.0
227
Tumor
0.0
481
Tumor
0.0
446
Normal
0.0
685
Tumor
0.0
636
Normal
0.0
396
Normal
0.0
434
Normal
0.0
1027
Tumor
0.0
563
Tumor
0.0
413
Tumor
-0.1
221
Tumor
-0.1
963
Tumor
-0.1
641
Tumor
-0.1
223
Tumor
-0.1
415
Tumor
-0.1
268
Normal
-0.1
444
Normal
-0.1
517
Tumor
-0.1
192
Normal
-0.1
545
Tumor
-0.1
977
Tumor
-0.1
574
Normal
-0.1
745
Tumor
-0.1
557
Tumor
-0.1
277
Tumor
-0.1
523
Tumor
-0.2
1021
Tumor
-0.2
384
Normal
-0.2
431
Tumor
-0.2
937
Tumor
-0.2
447
Tumor
-0.2
777
Tumor
-0.2
451
Tumor
-0.2
515
Tumor
-0.2
863
Tumor
-0.3
113
Tumor
-0.3
785
Tumor
-0.3
271
Tumor
-0.3
435
Tumor
-0.3
147
Tumor
-0.3
867
Tumor
-0.3
471
Tumor
-0.3
477
Tumor
-0.3
857
Tumor
-0.3
615
Tumor
-0.3
881
Tumor
-0.3
185
Tumor
-0.4
814
Normal
-0.4
665
Tumor
-0.4
1045
Tumor
-0.4
917
Tumor
-0.4
713
Tumor
-0.4
525
Tumor
-0.4
851
Tumor
-0.4
461
Tumor
-0.4
343
Tumor
-0.4
135
Tumor
-0.4
911
Tumor
-0.4
123
Tumor
-0.4
145
Tumor
-0.4
231
Tumor
-0.4
823
Tumor
-0.4
411
Tumor
-0.4
355
Tumor
-0.4
813
Tumor
-0.5
313
Tumor
-0.5
1025
Tumor
-0.5
217
Tumor
-0.5
925
Tumor
-0.5
483
Tumor
-0.5
513
Tumor
-0.5
467
Tumor
-0.5
187
Tumor
-0.5
953
Tumor
-0.5
112
Tumor
-0.5
341
Tumor
-0.5
365
Tumor
-0.5
635
Tumor
-0.5
487
Tumor
-0.5
421
Tumor
-0.5
967
Tumor
-0.5
211
Tumor
-0.5
737
Tumor
-0.5
965
Tumor
-0.5
866
Normal
-0.5
465
Tumor
-0.5
617
Tumor
-0.5
538
Normal
-0.5
697
Tumor
-0.5
297
Tumor
-0.5
1015
Tumor
-0.5
497
Tumor
-0.6
361
Tumor
-0.6
491
Tumor
-0.6
527
Tumor
-0.6
883
Tumor
-0.6
943
Tumor
-0.6
191
Tumor
-0.6
923
Tumor
-0.6
351
Tumor
-0.6
353
Tumor
-0.6
463
Tumor
-0.6
257
Tumor
-0.6
423
Tumor
-0.6
455
Tumor
-0.6
861
Tumor
-0.6
443
Tumor
-0.6
913
Tumor
-0.7
951
Tumor
-0.7
127
Tumor
-0.7
533
Tumor
-0.7
331
Tumor
-0.7
493
Tumor
-0.7
627
Tumor
-0.7
445
Tumor
-0.7
137
Tumor
-0.7
535
Tumor
-0.7
125
Tumor
-0.7
161
Tumor
-0.7
368
Normal
-0.7
1013
Tumor
-0.7
537
Tumor
-0.7
283
Tumor
-0.8
983
Tumor
-0.8
663
Tumor
-0.8
195
Tumor
-0.8
357
Tumor
-0.8
311
Tumor
-0.8
393
Tumor
-0.8
573
Tumor
-0.8
571
Tumor
-0.8
387
Tumor
-0.8
213
Tumor
-0.8
383
Tumor
-0.8
661
Tumor
-0.8
672
Normal
-0.8
724
Normal
-0.9
647
Tumor
-0.9
385
Tumor
-0.9
427
Tumor
-0.9
391
Tumor
-0.9
433
Tumor
-0.9
171
Tumor
-0.9
375
Tumor
-0.9
267
Tumor
-1.0
865
Tumor
-1.0
567
Tumor
-1.2
395
Tumor
-1.2
671
Tumor
-1.2
367
Tumor
-2.5
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
