HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:26.6 nTPM
HPA Brain:28.6 nTPM
GTEx:26.6 nTPM
FANTOM5:60.0 Scaled Tags Per Million
Pig:30.3 nTPM
Mouse:36.0 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003358
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 28.6
Sample id Sample description nTPM
Hippocampus
nTPM: 25.0
2529 Female, age 94, left hemisphere 28.4
1898 Male, age 80, left hemisphere 27.3
2621 Female, age 67, right hemisphere 24.8
1911 Female, age 85, right hemisphere 24.5
2148 Female, age 91, left hemisphere 22.9
1855 Male, age 76, left hemisphere 22.4
Dentate gyrus
nTPM: 24.4
2530 Female, age 94, left hemisphere 27.4
2010 Male, age 76, both hemispheres 27.1
2531 Female, age 67, both hemispheres 24.4
2246 Female, age 85, both hemispheres 24.3
1927 Female, age 91, both hemispheres 22.3
2528 Male, age 74, both hemispheres 20.6
Entorhinal gyrus
nTPM: 26.4
2117 Female, age 91, right hemisphere 32.4
2686 Male, age 75, right hemisphere 27.5
2764 Male, age 80, right hemisphere 27.3
1938 Female, age 85, left hemisphere 25.1
2613 Female, age 94, left hemisphere 23.7
1787 Male, age 76, left hemisphere 22.5
Hippocampus, CA1
nTPM: 23.3
2749 Male, age 80, left hemisphere 24.9
2527 Male, age 74, both hemispheres 24.3
1873 Female, age 85, both hemispheres 23.3
2082 Female, age 91, right hemisphere 22.6
2045 Male, age 76, both hemispheres 21.2
Hippocampus, CA2
nTPM: 25.1
1963 Male, age 80, left hemisphere 28.9
1940 Female, age 85, left hemisphere 25.7
2249 Male, age 74, both hemispheres 24.7
1892 Male, age 76, both hemispheres 24.4
2437 Female, age 94, left hemisphere 24.3
2113 Female, age 91, right hemisphere 22.8
Hippocampus, CA3
nTPM: 23.4
1891 Female, age 85, both hemispheres 30.9
1867 Male, age 76, both hemispheres 26.0
2137 Male, age 80, left hemisphere 23.9
2620 Female, age 94, left hemisphere 20.3
2436 Male, age 74, both hemispheres 20.0
2861 Female, age 67, both hemispheres 19.2
Parahippocampal cortex
nTPM: 26.3
2692 Male, age 74, both hemispheres 31.2
1850 Male, age 80, both hemispheres 29.5
1990 Female, age 91, right hemisphere 27.3
2532 Female, age 72, left hemisphere 27.0
2693 Female, age 94, both hemispheres 26.9
1933 Female, age 85, both hemispheres 25.6
2245 Female, age 91, both hemispheres 25.4
2018 Male, age 76, both hemispheres 24.7
2250 Female, age 67, right hemisphere 22.6
2622 Female, age 67, right hemisphere 22.5
Perirhinal gyrus
nTPM: 23.4
2521 Female, age 94, right hemisphere 25.3
1841 Female, age 85, right hemisphere 23.5
2848 Male, age 76, right hemisphere 23.4
1847 Female, age 91, left hemisphere 22.5
1794 Male, age 80, right hemisphere 22.1
Subiculum
nTPM: 28.6
1901 Male, age 80, both hemispheres 36.0
2042 Male, age 76, both hemispheres 34.3
2438 Female, age 94, left hemisphere 28.0
1977 Female, age 85, both hemispheres 27.2
2619 Male, age 74, both hemispheres 23.0
2729 Female, age 91, right hemisphere 22.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 26.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.6
Samples: 197

Max nTPM: 63.0
Min nTPM: 13.9
Std nTPM: 8.8
Median nTPM: 24.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 63.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 62.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 57.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 50.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 50.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 48.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 47.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 47.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 47.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 46.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 45.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 60.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.0
FF:10169-103B7 60 years, female 64.3
FF:10153-102I9 76 years, female 55.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 30.3
Pig sample Sample description nTPM
Subiculum
nTPM: 27.6
Samples: 4

Max nTPM: 32.3
Min nTPM: 24.6
Sample A Female 32.3
Sample B Female 24.7
Sample C Male 24.6
Sample D Male 28.9
Dorsal hippocampus
nTPM: 30.3
Samples: 4

Max nTPM: 35.8
Min nTPM: 26.2
Sample A Female 35.8
Sample B Female 28.4
Sample C Male 30.6
Sample D Male 26.2
Entorhinal cortex
nTPM: 28.6
Samples: 4

Max nTPM: 33.4
Min nTPM: 25.4
Sample A Female 27.2
Sample B Female 33.4
Sample C Male 28.4
Sample D Male 25.4
Ventral hippocampus
nTPM: 25.9
Samples: 4

Max nTPM: 31.1
Min nTPM: 20.1
Sample A Female 31.1
Sample B Female 25.8
Sample C Male 20.1
Sample D Male 26.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 36.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.2
Samples: 4

Max nTPM: 34.9
Min nTPM: 31.9
Sample A Male 34.9
Sample B Male 33.4
Sample C Female 31.9
Sample D Female 32.7
Hippocampal formation
nTPM: 36.0
Samples: 4

Max nTPM: 36.8
Min nTPM: 34.2
Sample A Male 36.6
Sample B Male 36.8
Sample C Female 36.4
Sample D Female 34.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org