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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRAPPC2L is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
97.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
210.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
183.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
168.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
164.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
158.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
140.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
140.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
140.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
138.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
137.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
136.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
135.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
129.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
121.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
121.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
117.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
116.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
115.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
113.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
113.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
113.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
112.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
101.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
101.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
101.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
100.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
99.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
97.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
96.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
93.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
92.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
91.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
88.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
87.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
86.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
85.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
84.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
84.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
83.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
81.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
81.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
80.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
79.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
77.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
75.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
74.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
71.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
70.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
69.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
67.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
67.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
66.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
64.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
63.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
62.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
62.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
57.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
56.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
52.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
51.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
47.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
45.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRAPPC2L is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
89.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
327.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
229.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
214.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
210.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
209.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
176.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
167.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
167.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
167.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
166.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
165.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
162.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
160.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
159.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
159.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
157.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
155.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
155.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
153.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
153.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
152.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
150.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
150.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
149.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
149.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
147.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
145.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
145.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
144.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
142.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
142.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
140.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
139.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
139.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
138.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
137.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
137.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
137.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
137.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
136.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
136.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
135.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
135.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
135.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
134.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
134.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
134.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
133.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
133.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
132.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
131.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
131.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
131.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
130.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
130.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
129.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
128.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
128.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
127.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
126.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
126.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
125.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
125.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
125.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
124.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
124.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
123.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
123.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
121.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
121.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
121.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
121.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
120.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
120.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
119.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
119.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
119.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
119.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
119.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
118.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
118.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
118.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
117.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
117.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
116.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
116.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
116.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
116.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
116.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
115.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
114.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
114.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
114.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
113.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
113.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
113.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
113.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
113.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
113.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
112.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
112.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
112.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
112.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
111.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
111.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
111.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
110.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
110.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
110.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
109.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
109.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
109.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
109.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
109.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
109.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
108.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
108.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
108.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
107.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
107.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
107.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
107.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
107.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
107.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
106.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
106.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
105.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
105.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
105.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
105.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
104.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
104.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
104.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
104.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
104.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
103.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
103.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
103.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
103.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
103.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
103.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
102.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
102.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
102.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
101.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
101.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
101.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
101.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
101.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
101.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
101.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
101.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
101.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
100.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
99.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
99.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
99.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
99.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
99.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
99.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
98.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
98.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
98.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
98.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
98.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
98.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
97.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
97.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
97.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
97.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
97.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
97.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
96.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
96.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
96.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
96.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
96.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
96.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
96.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
96.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
95.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
95.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
95.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
95.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
95.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
95.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
95.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
94.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
94.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
94.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
94.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
94.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
94.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
93.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
93.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
93.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
93.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
93.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
93.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
93.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
92.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
92.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
92.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
92.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
91.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
91.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
91.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
91.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
91.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
91.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
91.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
91.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
90.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
90.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
90.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
90.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
90.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
90.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
90.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
89.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
89.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
89.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
89.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
89.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
89.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
89.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
89.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
89.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
88.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
88.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
88.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
88.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
88.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
88.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
87.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
87.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
87.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
87.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
87.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
87.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
87.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
86.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
86.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
86.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
86.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
86.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
86.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
86.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
86.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
86.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
86.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
85.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
85.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
85.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
85.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
85.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
85.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
85.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
85.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
84.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
84.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
84.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
84.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
84.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
84.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
84.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
84.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
84.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
83.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
83.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
83.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
83.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
83.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
83.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
83.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
83.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
82.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
82.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
82.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
82.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
82.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
82.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
82.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
82.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
82.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
82.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
82.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
82.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
81.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
81.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
81.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
81.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
81.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
81.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
81.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
81.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
81.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
81.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
80.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
80.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
80.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
80.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
80.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
80.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
80.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
80.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
80.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
80.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
80.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
79.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
79.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
79.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
79.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
79.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
79.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
79.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
79.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
78.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
78.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
78.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
78.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
78.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
78.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
78.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
77.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
77.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
77.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
77.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
77.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
77.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
77.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
77.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
77.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
77.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
77.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
77.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
77.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
76.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
76.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
76.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
76.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
76.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
75.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
75.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
75.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
75.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
75.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
75.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
75.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
75.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
75.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
75.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
75.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
75.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
74.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
74.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
74.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
74.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
74.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
74.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
74.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
74.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
74.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
73.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
73.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
73.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
73.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
73.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
73.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
72.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
72.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
72.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
72.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
72.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
71.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
71.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
71.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
71.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
71.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
70.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
70.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
70.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
70.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
70.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
69.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
69.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
69.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
69.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
69.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
69.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
69.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
68.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
68.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
68.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
68.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
68.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
68.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
67.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
67.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
67.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
67.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
67.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
67.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
66.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
66.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
66.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
66.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
65.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
65.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
65.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
65.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
65.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
65.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
65.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
65.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
64.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
64.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
63.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
63.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
63.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
63.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
63.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
63.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
63.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
63.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
63.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
62.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
62.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
62.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
61.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
61.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
61.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
61.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
60.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
59.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
59.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
59.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
59.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
59.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
59.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
58.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
58.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
57.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
57.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
56.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
56.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
56.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
56.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
56.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
56.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
56.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
55.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
55.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
55.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
55.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
55.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
55.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
55.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
55.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
54.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
54.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
54.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
54.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
53.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
53.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
53.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
53.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
52.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
52.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
52.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
52.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
52.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
51.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
51.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
51.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
51.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
51.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
51.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
50.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
50.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
49.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
49.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
49.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
49.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
47.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
47.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
46.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
46.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
45.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
44.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
43.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
43.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
42.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
42.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
42.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
42.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
41.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
41.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
41.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
40.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
39.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
39.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
39.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
39.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
38.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
37.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
37.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
37.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
36.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
36.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
35.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
35.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
33.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
33.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
32.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
32.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
31.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
30.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
30.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
27.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRAPPC2L is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
76.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
146.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
128.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
122.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
119.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
118.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
115.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
114.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
112.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
112.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
107.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
102.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
101.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
99.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
98.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
97.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
95.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
94.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
93.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
93.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
92.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
92.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
92.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
91.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
90.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
89.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
88.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
88.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
86.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
86.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
85.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
85.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
85.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
84.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
83.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
82.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
81.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
80.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
80.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
79.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
79.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
79.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
78.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
78.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
78.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
78.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
77.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
77.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
77.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
77.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
76.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
75.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
75.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
73.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
73.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
73.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
72.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
72.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
71.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
70.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
70.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
69.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
67.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
67.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
67.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
67.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
66.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
66.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
66.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
66.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
64.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
64.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
63.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
63.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
62.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
62.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
61.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
60.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
59.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
59.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
59.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
58.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
57.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
56.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
56.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
55.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
55.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
54.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
53.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
52.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
52.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
50.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
47.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
46.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
46.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
40.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
40.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
38.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
37.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
36.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRAPPC2L is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
90.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
331.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
303.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
296.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
263.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
202.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
200.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
188.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
186.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
181.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
175.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
174.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
169.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
169.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
168.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
166.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
165.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
155.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
154.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
153.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
153.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
151.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
151.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
150.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
150.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
149.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
148.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
148.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
147.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
145.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
145.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
145.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
144.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
144.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
142.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
142.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
141.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
139.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
138.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
138.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
137.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
136.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
136.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
134.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
131.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
130.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
129.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
128.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
126.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
126.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
125.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
124.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
124.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
122.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
122.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
121.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
121.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
121.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
120.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
119.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
119.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
118.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
117.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
117.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
117.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
116.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
116.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
116.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
115.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
115.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
115.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
115.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
114.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
114.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
113.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
112.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
111.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
111.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
111.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
110.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
110.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
109.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
109.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
109.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
108.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
107.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
106.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
105.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
105.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
105.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
105.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
104.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
103.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
102.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
102.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
101.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
100.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
100.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
100.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
100.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
99.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
99.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
99.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
99.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
99.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
98.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
98.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
98.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
97.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
96.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
95.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
95.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
95.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
94.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
93.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
92.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
92.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
92.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
91.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
91.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
91.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
90.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
90.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
89.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
88.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
88.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
88.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
88.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
88.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
87.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
87.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
87.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
86.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
86.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
86.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
85.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
85.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
85.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
85.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
84.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
84.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
83.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
83.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
83.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
81.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
81.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
81.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
80.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
80.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
80.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
80.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
80.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
80.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
80.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
79.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
79.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
78.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
77.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
76.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
76.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
76.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
76.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
76.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
76.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
75.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
74.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
74.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
74.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
73.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
73.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
73.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
72.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
72.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
71.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
71.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
70.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
70.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
70.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
69.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
69.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
68.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
68.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
67.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
67.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
67.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
67.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
67.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
66.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
66.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
66.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
66.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
66.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
66.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
65.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
65.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
65.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
63.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
63.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
63.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
63.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
63.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
63.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
63.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
62.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
62.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
62.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
61.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
61.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
61.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
61.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
60.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
60.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
60.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
60.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
59.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
59.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
59.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
59.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
59.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
59.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
58.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
58.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
58.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
58.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
57.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
57.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
57.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
57.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
56.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
56.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
55.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
55.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
55.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
54.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
53.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
53.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
52.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
52.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
51.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
51.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
50.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
50.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
49.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
49.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
48.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
48.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
48.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
47.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
47.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
46.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
45.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
45.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
44.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
44.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
42.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
42.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
40.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
40.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
40.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
39.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
39.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
38.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
38.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
38.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
37.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
37.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
35.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
33.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
33.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
33.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
32.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
31.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
29.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
29.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
29.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
27.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
27.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
24.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
22.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
20.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
18.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
15.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
2.5
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078660003
Tumor
0.9
CPT0079180003
Tumor
0.9
CPT0078800003
Tumor
0.5
CPT0076350001
Normal
0.4
CPT0088550004
Tumor
0.4
CPT0012640003
Normal
0.4
CPT0066430001
Normal
0.4
CPT0006730001
Normal
0.4
CPT0024680001
Normal
0.4
CPT0009080003
Normal
0.3
CPT0017450001
Normal
0.3
CPT0088920001
Normal
0.3
CPT0018250001
Normal
0.3
CPT0001350001
Normal
0.3
CPT0025610001
Normal
0.3
CPT0092740003
Normal
0.3
CPT0079430001
Normal
0.3
CPT0024670003
Tumor
0.3
CPT0007870001
Normal
0.3
CPT0012090003
Normal
0.3
CPT0082010001
Normal
0.3
CPT0012570003
Normal
0.3
CPT0017410003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0009060003
Tumor
0.3
CPT0025060001
Normal
0.2
CPT0009020003
Normal
0.2
CPT0010170001
Normal
0.2
CPT0069190001
Normal
0.2
CPT0077140001
Normal
0.2
CPT0002270011
Tumor
0.2
CPT0069010001
Normal
0.2
CPT0001190001
Normal
0.2
CPT0065450001
Normal
0.2
CPT0086970003
Normal
0.2
CPT0078840001
Normal
0.2
CPT0012290003
Normal
0.2
CPT0075560003
Tumor
0.2
CPT0014470001
Normal
0.2
CPT0012770003
Normal
0.2
CPT0077310003
Tumor
0.2
CPT0078990003
Tumor
0.2
CPT0014130001
Normal
0.2
CPT0075170001
Normal
0.2
CPT0007470001
Normal
0.2
CPT0089040001
Normal
0.2
CPT0000790001
Normal
0.2
CPT0021240003
Tumor
0.2
CPT0064400001
Normal
0.2
CPT0078670001
Normal
0.2
CPT0006530001
Normal
0.2
CPT0006950001
Normal
0.2
CPT0001340003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0012920003
Normal
0.2
CPT0065810003
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0023350003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0089480003
Normal
0.1
CPT0088570001
Normal
0.1
CPT0014450004
Tumor
0.1
CPT0084560003
Tumor
0.1
CPT0010120001
Normal
0.1
CPT0026410003
Tumor
0.1
CPT0079000001
Normal
0.1
CPT0007320003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0086890003
Normal
0.1
CPT0063330001
Normal
0.1
CPT0081620001
Normal
0.1
CPT0088780001
Normal
0.1
CPT0010110003
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0001500009
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0079300001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0075570001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0011240003
Tumor
0.1
CPT0088970003
Tumor
0.1
CPT0088500001
Normal
0.1
CPT0087050003
Normal
0.1
CPT0025880003
Tumor
0.1
CPT0020020001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0001230001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0086830003
Normal
0.1
CPT0077500001
Normal
0.1
CPT0086370003
Normal
0.1
CPT0025920001
Normal
0.0
CPT0006440003
Tumor
0.0
CPT0079270003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0079410003
Tumor
0.0
CPT0079510001
Normal
0.0
CPT0077110003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0069160003
Tumor
0.0
CPT0026420001
Normal
0.0
CPT0001540009
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0017850003
Tumor
0.0
CPT0009000003
Tumor
0.0
CPT0012550003
Tumor
0.0
CPT0077320001
Normal
0.0
CPT0014350001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0063320003
Tumor
-0.1
CPT0086820003
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0079380003
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0012670003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0012370003
Tumor
-0.1
CPT0001180009
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0086950003
Tumor
-0.1
CPT0025230003
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0071150004
Tumor
-0.1
CPT0081600003
Tumor
-0.1
CPT0069000003
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0076330003
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0081880003
Tumor
-0.1
CPT0001220008
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0025170003
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0088480003
Tumor
-0.1
CPT0014160003
Tumor
-0.1
CPT0077490003
Tumor
-0.1
CPT0012180003
Tumor
-0.1
CPT0025580004
Tumor
-0.2
CPT0078930003
Tumor
-0.2
CPT0092730003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0085670003
Tumor
-0.2
CPT0075130003
Tumor
-0.2
CPT0025050003
Tumor
-0.2
CPT0088760003
Tumor
-0.2
CPT0002350011
Tumor
-0.2
CPT0025290003
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0065930003
Tumor
-0.2
CPT0015910003
Tumor
-0.2
CPT0000640003
Tumor
-0.2
CPT0025350003
Tumor
-0.2
CPT0025110003
Tumor
-0.2
CPT0086030003
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0078830003
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0078530001
Normal
-0.3
CPT0063630003
Tumor
-0.3
CPT0065690003
Tumor
-0.3
CPT0065430003
Tumor
-0.3
CPT0001260009
Tumor
-0.3
CPT0019130003
Tumor
-0.3
CPT0019990003
Tumor
-0.3
CPT0092290003
Tumor
-0.3
CPT0088630003
Tumor
-0.4
CPT0089460004
Tumor
-0.4
CPT0000780007
Tumor
-0.4
CPT0088690003
Tumor
-0.4
CPT0066470004
Tumor
-0.4
CPT0010160003
Tumor
-0.4
CPT0078510003
Tumor
-0.5
CPT0065750003
Tumor
-0.5
CPT0089020003
Tumor
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.