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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
162.4
nTPM
GTEx:
162.4
nTPM
FANTOM5:
797.2
Scaled Tags Per Million
Pig:
478.4
nTPM
Mouse:
1323.0
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
162.4
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 162.4
Samples: 105
Max nTPM: 303.6
Min nTPM: 16.5
Std nTPM: 68.4
Median nTPM:
218_1
71 years, female
303.6
452_1
88 years, female
289.4
354_1
81 years, female
279.9
377_1
82 years, female
270.3
163_1
78 years, male
269.4
319_1
81 years, male
263.2
353_1
82 years, female
260.9
386_1
76 years, male
256.3
351_1
91 years, male
256.0
356_1
87 years, female
254.7
352_1
62 years, male
254.5
350_1
84 years, female
246.2
322_1
76 years, male
244.7
379_1
60 years, male
239.7
172_1
72 years, female
238.8
355_1
70 years, female
237.7
243_1
75 years, male
234.2
394_1
75 years, female
231.8
321_1
62 years, female
231.1
506_1
65 years, male
229.6
349_1
83 years, male
226.9
177_1
74 years, male
221.8
264_1
73 years, female
221.4
404_1
82 years, female
218.8
335_1
73 years, female
218.5
318_1
68 years, male
217.8
293_1
68 years, female
216.7
376_1
75 years, female
213.7
251_1
78 years, male
213.6
237_1
82 years, male
212.0
384_1
83 years, male
209.7
295_1
61 years, female
204.4
189_1
76 years, male
201.9
406_1
79 years, male
200.8
447_1
81 years, male
197.8
292_1
71 years, male
197.4
425_1
59 years, female
196.6
503_1
68 years, male
196.4
320_1
89 years, female
196.0
405_1
91 years, male
194.1
317_1
60 years, male
188.1
286_1
68 years, female
186.8
375_1
74 years, female
183.6
396_1
62 years, male
183.4
173_1
67 years, male
181.5
389_1
86 years, female
181.4
316_1
62 years, male
180.8
348_1
84 years, male
179.4
246_1
77 years, male
176.1
229_1
69 years, female
175.6
480_1
63 years, male
172.8
137_1
83 years, male
171.3
6_1
73 years, female
169.6
347_1
72 years, male
164.8
265_1
87 years, male
163.6
99_1
64 years, male
163.4
526_1
61 years, male
161.7
17_1
71 years, male
159.7
517_1
88 years, male
156.2
2_1
77 years, female
153.8
291_1
76 years, male
149.7
41_1
94 years, female
149.4
266_1
85 years, male
149.2
254_1
77 years, female
149.0
518_1
75 years, female
145.3
153_1
70 years, female
142.7
115_1
83 years, male
142.5
311_1
78 years, male
140.3
4_1
88 years, female
137.9
145_1
84 years, male
134.2
18_1
88 years, male
131.9
35_1
74 years, female
131.1
109_1
81 years, female
123.8
468_1
89 years, male
123.1
314_1
67 years, male
120.2
307_1
66 years, female
119.9
217_1
76 years, male
112.7
120_1
70 years, female
112.5
313_1
79 years, female
106.4
288_1
66 years, female
101.7
324_1
76 years, male
100.0
81_1
67 years, male
99.7
315_1
62 years, female
98.9
9_1
66 years, female
97.4
42_1
85 years, male
97.0
126_1
63 years, male
92.8
499_1
55 years, female
92.2
139_1
64 years, female
91.6
117_1
61 years, male
88.6
142_1
61 years, female
87.6
308_1
70 years, female
85.8
495_1
57 years, female
77.0
162_1
79 years, female
72.6
32_1
67 years, male
67.1
119_1
70 years, female
66.9
43_1
64 years, female
60.9
501_1
88 years, male
50.9
466_1
57 years, female
50.7
415_1
77 years, female
49.5
89_1
63 years, male
45.2
414_1
84 years, female
39.9
149_1
88 years, male
29.5
413_1
59 years, female
24.5
490_1
67 years, female
18.7
491_1
89 years, female
16.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.