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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMG8 is not prognostic in Colon Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.3
Number of samples
254
Samples
Sample
Description
TPM
TCGA-CA-5254-01A
0 years, female, asian, stage:Stage IIA, alive, 386 days
21.0
TCGA-A6-6780-01A
0 years, male, white, stage:Stage IIA, alive, 612 days
13.4
TCGA-CA-6715-01A
0 years, male, asian, stage:Stage IIIB, alive, 383 days
12.7
TCGA-CM-6675-01A
0 years, male, black or african american, stage:Stage IVB, alive, 397 days
12.6
TCGA-AU-3779-01A
0 years, female, white, stage:Stage IIA, alive, 441 days
12.5
TCGA-NH-A8F7-01A
0 years, female, black or african american, stage:Stage IIA, alive, 543 days
12.3
TCGA-A6-3809-01A
0 years, female, white, stage:Stage IIB, alive, 996 days
12.2
TCGA-D5-6537-01A
0 years, male, white, stage:Stage IIIB, dead, 146 days
12.1
TCGA-A6-6648-01A
0 years, male, white, stage:Stage IVA, alive, 766 days
12.0
TCGA-A6-3810-01A
0 years, male, white, stage:Stage IIA, alive, 1111 days
12.0
TCGA-A6-5656-01A
0 years, male, white, stage:Stage I, alive, 1001 days
11.9
TCGA-D5-6922-01A
0 years, male, white, stage:Stage IIIA, alive, 308 days
11.8
TCGA-AM-5820-01A
0 years, female, white, stage:Stage IVA, alive, 14 days
11.7
TCGA-A6-6781-01A
0 years, male, white, stage:Stage IIIC, alive, 598 days
11.6
TCGA-A6-5662-01A
0 years, male, white, stage:Stage IVA, alive, 718 days
11.6
TCGA-D5-6926-01A
0 years, male, white, stage:Stage IIIB, alive, 275 days
11.5
TCGA-CM-6676-01A
0 years, male, white, stage:Stage I, alive, 337 days
11.4
TCGA-D5-6923-01A
0 years, male, white, stage:Stage I, alive, 378 days
11.4
TCGA-AZ-6603-01A
0 years, female, white, stage:'--, dead, 899 days
11.3
TCGA-A6-6137-01A
0 years, male, white, stage:Stage IIIB, alive, 824 days
11.2
TCGA-G4-6297-01A
0 years, female, white, stage:Stage IV, alive, 2506 days
11.2
TCGA-A6-5667-01A
0 years, female, white, stage:Stage IIIB, alive, 887 days
11.0
TCGA-D5-6924-01A
0 years, male, white, stage:Stage IIA, alive, 435 days
10.8
TCGA-A6-4105-01A
0 years, male, white, stage:Stage IIA, dead, 442 days
10.7
TCGA-G4-6626-01A
0 years, male, white, stage:Stage IIA, dead, 1 days
10.6
TCGA-AA-3496-01A
0 years, female, stage:Stage II, alive, 31 days
10.5
TCGA-F4-6459-01A
0 years, female, white, stage:Stage IIIB, dead, 262 days
10.4
TCGA-A6-6138-01A
0 years, male, white, stage:Stage I, alive, 685 days
10.4
TCGA-D5-6532-01A
0 years, male, white, stage:Stage IIA, alive, 555 days
10.2
TCGA-D5-6535-01A
0 years, female, white, stage:Stage IIIB, alive, 460 days
10.2
TCGA-A6-5659-01A
0 years, male, white, stage:Stage I, alive, 926 days
10.1
TCGA-G4-6303-01A
0 years, female, white, stage:Stage IV, dead, 2003 days
10.1
TCGA-D5-6533-01A
0 years, female, white, stage:'--, alive, 775 days
9.9
TCGA-DM-A1DB-01A
0 years, male, white, stage:Stage IIA, dead, 1348 days
9.9
TCGA-WS-AB45-01A
0 years, female, black or african american, stage:Stage IIA, alive, 2130 days
9.8
TCGA-A6-6652-01A
0 years, male, black or african american, stage:Stage IVA, alive, 751 days
9.8
TCGA-CA-6718-01A
0 years, male, asian, stage:Stage IIA, dead, 306 days
9.7
TCGA-CM-6165-01A
0 years, male, white, stage:Stage IIA, alive, 488 days
9.7
TCGA-AY-A8YK-01A
0 years, male, black or african american, stage:Stage IVA, alive, 573 days
9.7
TCGA-G4-6311-01A
0 years, male, white, stage:Stage III, alive, 1199 days
9.7
TCGA-NH-A6GA-01A
0 years, male, black or african american, stage:Stage IIIC, dead, 302 days
9.6
TCGA-AZ-6607-01A
0 years, male, white, stage:Stage IV, dead, 97 days
9.6
TCGA-CM-6167-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 456 days
9.6
TCGA-AD-6963-01A
0 years, male, white, stage:'--, alive, 834 days
9.5
TCGA-A6-5666-01A
0 years, male, white, stage:Stage IIC, alive, 995 days
9.5
TCGA-AD-6964-01A
0 years, male, white, stage:'--, dead, 331 days
9.4
TCGA-AA-3713-01A
0 years, male, stage:Stage IV, alive, 579 days
9.4
TCGA-D5-6538-01A
0 years, female, white, stage:Stage IIIB, alive, 521 days
9.3
TCGA-SS-A7HO-01A
0 years, female, black or african american, stage:Stage IIB, alive, 1829 days
9.3
TCGA-A6-5660-01A
0 years, male, black or african american, stage:Stage IIIC, alive, 888 days
9.2
TCGA-CM-6164-01A
0 years, female, white, stage:Stage IIA, alive, 883 days
9.2
TCGA-D5-5538-01A
0 years, female, white, stage:Stage IIIB, dead, 1661 days
9.2
TCGA-CM-6163-01A
0 years, male, white, stage:Stage I, alive, 427 days
9.1
TCGA-D5-6898-01A
0 years, female, white, stage:Stage I, alive, 229 days
9.0
TCGA-CA-6716-01A
0 years, male, asian, stage:Stage IIA, alive, 371 days
8.9
TCGA-A6-2674-01A
0 years, male, white, stage:Stage IV, alive, 1331 days
8.9
TCGA-F4-6805-01A
0 years, female, white, stage:Stage IIA, alive, 1047 days
8.8
TCGA-CK-6748-01A
0 years, female, white, stage:Stage IV, alive, 61 days
8.8
TCGA-AA-3526-01A
0 years, male, stage:Stage I, alive, 580 days
8.8
TCGA-A6-2675-01A
0 years, male, white, stage:Stage IIA, alive, 1321 days
8.8
TCGA-AZ-6601-01A
0 years, male, white, stage:Stage II, dead, 3042 days
8.8
TCGA-CM-6169-01A
0 years, male, black or african american, stage:Stage IIA, alive, 396 days
8.7
TCGA-DM-A28A-01A
0 years, male, white, stage:Stage IIIC, dead, 805 days
8.7
TCGA-NH-A8F8-01A
0 years, male, black or african american, stage:Stage IV, dead, 511 days
8.7
TCGA-CA-6719-01A
0 years, male, asian, stage:Stage IIA, alive, 435 days
8.7
TCGA-A6-5657-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 962 days
8.7
TCGA-G4-6314-01A
0 years, female, white, stage:Stage IV, alive, 1093 days
8.6
TCGA-CM-6168-01A
0 years, female, black or african american, stage:Stage IIA, alive, 395 days
8.6
TCGA-A6-6140-01A
0 years, male, white, stage:Stage IIA, alive, 734 days
8.6
TCGA-A6-A56B-01A
0 years, male, black or african american, stage:Stage IIIB, dead, 1711 days
8.6
TCGA-AU-6004-01A
0 years, female, white, stage:Stage I, alive, 824 days
8.5
TCGA-F4-6855-01A
0 years, female, white, stage:Stage IIA, alive, 1442 days
8.5
TCGA-G4-6628-01A
0 years, male, white, stage:Stage I, alive, 2424 days
8.4
TCGA-CM-6161-01A
0 years, female, white, stage:Stage I, alive, 457 days
8.4
TCGA-CM-6170-01A
0 years, female, white, stage:Stage I, alive, 457 days
8.4
TCGA-NH-A6GB-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 476 days
8.3
TCGA-D5-5539-01A
0 years, male, white, stage:Stage IIIA, alive, 596 days
8.3
TCGA-G4-6588-01A
0 years, female, white, stage:Stage IIA, alive, 796 days
8.3
TCGA-CA-6717-01A
0 years, male, asian, stage:Stage IIA, alive, 388 days
8.2
TCGA-CM-5344-01A
0 years, female, white, stage:Stage IIIB, alive, 670 days
8.1
TCGA-DM-A1HA-01A
0 years, male, white, stage:Stage IIIC, alive, 2600 days
8.1
TCGA-AA-3663-01A
0 years, male, stage:Stage II, alive, 212 days
8.1
TCGA-CM-6171-01A
0 years, female, white, stage:Stage I, alive, 427 days
8.1
TCGA-D5-6931-01A
0 years, male, white, stage:Stage IIIC, alive, 365 days
8.0
TCGA-CK-5913-01A
0 years, female, white, stage:Stage IIA, alive, 1561 days
8.0
TCGA-D5-7000-01A
0 years, female, white, stage:Stage I, alive, 312 days
8.0
TCGA-F4-6854-01A
0 years, female, white, stage:Stage IIA, alive, 16 days
8.0
TCGA-CK-5912-01A
0 years, male, white, stage:Stage I, dead, 1493 days
8.0
TCGA-AD-A5EK-01A
0 years, male, black or african american, stage:Stage I, alive, 500 days
8.0
TCGA-D5-6541-01A
0 years, male, white, stage:Stage IIA, alive, 474 days
8.0
TCGA-CK-5916-01A
0 years, female, white, stage:Stage I, dead, 643 days
7.9
TCGA-G4-6295-01A
0 years, female, white, stage:Stage II, alive, 254 days
7.9
TCGA-F4-6856-01A
0 years, male, white, stage:Stage I, alive, 1074 days
7.9
TCGA-CM-6679-01A
0 years, male, white, stage:Stage IIA, alive, 306 days
7.9
TCGA-CK-5914-01A
0 years, male, white, stage:Stage IIIB, alive, 669 days
7.9
TCGA-DM-A28F-01A
0 years, male, white, stage:Stage IIIB, dead, 1094 days
7.9
TCGA-AA-3660-01A
0 years, female, stage:Stage II, alive, 2375 days
7.9
TCGA-A6-5661-01A
0 years, female, black or african american, stage:Stage IIA, alive, 1020 days
7.8
TCGA-F4-6806-01A
0 years, female, white, stage:Stage I, alive, 1260 days
7.8
TCGA-AD-6890-01A
0 years, male, white, stage:'--, alive, 746 days
7.8
TCGA-D5-6928-01A
0 years, male, white, stage:Stage IIA, alive, 354 days
7.8
TCGA-A6-6651-01A
0 years, female, white, stage:Stage IIIB, alive, 662 days
7.7
TCGA-AD-6548-01A
0 years, female, white, stage:Stage I, alive, 650 days
7.7
TCGA-AM-5821-01A
0 years, female, white, stage:Stage IIA, alive, 28 days
7.7
TCGA-CK-6747-01A
0 years, female, white, stage:Stage IIA, alive, 820 days
7.7
TCGA-AA-3697-01A
0 years, male, stage:Stage II, alive, 2587 days
7.7
TCGA-QG-A5Z2-01A
0 years, male, black or african american, stage:Stage I, alive, 952 days
7.7
TCGA-5M-AAT6-01A
0 years, female, black or african american, stage:Stage IV, dead, 290 days
7.6
TCGA-F4-6703-01A
0 years, male, white, stage:Stage IIA, alive, 1456 days
7.6
TCGA-G4-6315-01A
0 years, male, white, stage:Stage IV, alive, 1883 days
7.6
TCGA-AA-3655-01A
0 years, male, stage:Stage II, alive, 1856 days
7.6
TCGA-A6-5665-01A
0 years, female, white, stage:Stage IIA, alive, 671 days
7.6
TCGA-CM-6172-01A
0 years, female, white, stage:Stage IIIB, alive, 335 days
7.6
TCGA-G4-6310-01A
0 years, male, white, stage:Stage IIIB, alive, 1935 days
7.5
TCGA-D5-6927-01A
0 years, male, white, stage:Stage IIA, alive, 287 days
7.5
TCGA-AA-3489-01A
0 years, male, stage:Stage II, dead, 214 days
7.5
TCGA-QG-A5YX-01A
0 years, female, black or african american, stage:Stage IIA, alive, 1003 days
7.5
TCGA-CA-5797-01A
0 years, male, asian, stage:Stage IIA, alive, 383 days
7.5
TCGA-D5-6531-01A
0 years, male, white, stage:Stage IIA, alive, 540 days
7.5
TCGA-AD-6895-01A
0 years, male, white, stage:Stage IIIB, alive, 763 days
7.5
TCGA-F4-6807-01A
0 years, female, white, stage:Stage IIIC, alive, 1309 days
7.4
TCGA-3L-AA1B-01A
0 years, female, black or african american, stage:Stage I, alive, 475 days
7.4
TCGA-AY-6197-01A
0 years, male, white, stage:Stage IIA, alive, 652 days
7.4
TCGA-A6-6142-01A
0 years, female, white, stage:Stage IVA, alive, 763 days
7.4
TCGA-A6-A567-01A
0 years, male, black or african american, stage:Stage IV, dead, 1881 days
7.4
TCGA-A6-6654-01A
0 years, female, white, stage:Stage IIIB, alive, 726 days
7.3
TCGA-D5-6920-01A
0 years, female, white, stage:Stage IIA, alive, 377 days
7.2
TCGA-F4-6463-01A
0 years, male, white, stage:Stage IIA, alive, 1087 days
7.2
TCGA-5M-AATE-01A
0 years, male, black or african american, stage:Stage IIA, alive, 1200 days
7.1
TCGA-A6-6650-01A
0 years, female, black or african american, stage:Stage IIA, alive, 627 days
7.1
TCGA-G4-6625-01A
0 years, female, white, stage:Stage IIA, alive, 2792 days
7.1
TCGA-F4-6570-01A
0 years, female, white, stage:Stage IIA, dead, 188 days
7.1
TCGA-D5-6540-01A
0 years, male, white, stage:Stage I, alive, 491 days
7.0
TCGA-AZ-4323-01A
0 years, male, white, stage:Stage IV, dead, 43 days
6.9
TCGA-5M-AAT4-01A
0 years, male, black or african american, stage:Stage IV, dead, 49 days
6.9
TCGA-AD-5900-01A
0 years, male, white, stage:Stage I, alive, 370 days
6.9
TCGA-AY-A69D-01A
0 years, female, black or african american, stage:Stage IIA, alive, 543 days
6.9
TCGA-AA-3675-01A
0 years, male, stage:Stage II, alive, 1431 days
6.8
TCGA-T9-A92H-01A
0 years, male, black or african american, stage:Stage IIA, alive, 362 days
6.8
TCGA-AD-6888-01A
0 years, male, white, stage:Stage IIIB, dead, 472 days
6.8
TCGA-AD-6965-01A
0 years, male, white, stage:Stage IIIC, alive, 805 days
6.8
TCGA-D5-6536-01A
0 years, male, white, stage:Stage IIA, alive, 543 days
6.8
TCGA-G4-6294-01A
0 years, male, white, stage:Stage IV, dead, 858 days
6.7
TCGA-NH-A50T-01A
0 years, female, black or african american, stage:Stage IIA, alive, 553 days
6.7
TCGA-AD-6901-01A
0 years, male, white, stage:'--, dead, 682 days
6.7
TCGA-AA-3511-01A
0 years, male, stage:Stage II, alive, 212 days
6.7
TCGA-AZ-5407-01A
0 years, female, white, stage:Stage I, alive, 2683 days
6.7
TCGA-AZ-5403-01A
0 years, male, white, stage:Stage II, dead, 1910 days
6.7
TCGA-AY-A54L-01A
0 years, female, black or african american, stage:Stage I, alive, 525 days
6.6
TCGA-G4-6317-01A
0 years, female, white, stage:Stage IIIC, alive, 1095 days
6.6
TCGA-CM-5860-01A
0 years, male, white, stage:Stage IIA, alive, 974 days
6.5
TCGA-D5-6529-01A
0 years, male, white, stage:Stage IIA, alive, 614 days
6.5
TCGA-A6-6649-01A
0 years, male, white, stage:Stage IIIB, alive, 735 days
6.5
TCGA-G4-6293-01A
0 years, female, white, stage:Stage III, alive, 4051 days
6.4
TCGA-D5-6539-01A
0 years, female, white, stage:'--, alive, 380 days
6.4
TCGA-A6-6653-01A
0 years, male, white, stage:Stage I, alive, 742 days
6.4
TCGA-G4-6309-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 2600 days
6.4
TCGA-QG-A5YW-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 896 days
6.3
TCGA-F4-6808-01A
0 years, female, white, stage:Stage I, alive, 1024 days
6.3
TCGA-NH-A50V-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 588 days
6.3
TCGA-CM-6678-01A
0 years, female, white, stage:Stage IVA, alive, 335 days
6.3
TCGA-DM-A28E-01A
0 years, female, white, stage:Stage IIA, alive, 3648 days
6.2
TCGA-CM-6677-01A
0 years, female, white, stage:Stage IIA, alive, 337 days
6.2
TCGA-CM-6166-01A
0 years, female, white, stage:Stage I, alive, 669 days
6.2
TCGA-CM-6680-01A
0 years, female, white, stage:Stage IIIB, alive, 366 days
6.2
TCGA-CK-4952-01A
0 years, female, white, stage:Stage IIIC, alive, 475 days
6.2
TCGA-CM-5868-01A
0 years, female, white, stage:Stage IVA, alive, 518 days
6.1
TCGA-DM-A288-01A
0 years, male, white, stage:Stage IIIC, dead, 427 days
6.1
TCGA-AZ-6606-01A
0 years, male, white, stage:Stage IV, dead, 357 days
6.1
TCGA-CM-5349-01A
0 years, female, white, stage:Stage IIA, alive, 915 days
6.1
TCGA-AY-6196-01A
0 years, male, white, stage:Stage IIIC, alive, 6 days
6.0
TCGA-AZ-6605-01A
0 years, male, white, stage:Stage IIIB, dead, 159 days
6.0
TCGA-CM-6162-01A
0 years, female, white, stage:Stage IIIB, alive, 365 days
6.0
TCGA-4T-AA8H-01A
0 years, female, black or african american, stage:Stage IIA, alive, 385 days
6.0
TCGA-G4-6323-01A
0 years, male, black or african american, stage:Stage IA, alive, 419 days
5.9
TCGA-QG-A5Z1-01A
0 years, male, black or african american, stage:Stage IIIB, dead, 256 days
5.9
TCGA-AZ-6600-01A
0 years, male, black or african american, stage:Stage IV, dead, 368 days
5.9
TCGA-F4-6704-01A
0 years, male, american indian or alaska native, stage:Stage IIIC, alive, 47 days
5.8
TCGA-DM-A1D6-01A
0 years, male, white, stage:Stage IIA, dead, 570 days
5.8
TCGA-DM-A1D0-01A
0 years, female, white, stage:Stage IIA, alive, 3974 days
5.8
TCGA-QG-A5YV-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1301 days
5.8
TCGA-G4-6299-01A
0 years, male, white, stage:Stage IIIC, alive, 2268 days
5.8
TCGA-AD-6899-01A
0 years, male, white, stage:Stage IIIC, dead, 176 days
5.8
TCGA-A6-6782-01A
0 years, male, white, stage:Stage IIB, alive, 617 days
5.8
TCGA-DM-A285-01A
0 years, female, white, stage:Stage IV, dead, 179 days
5.7
TCGA-AY-A71X-01A
0 years, female, black or african american, stage:Stage I, alive, 588 days
5.7
TCGA-G4-6586-01A
0 years, female, white, stage:Stage IIA, alive, 1089 days
5.7
TCGA-AY-5543-01A
0 years, female, black or african american, stage:Stage IVA, alive, 1004 days
5.6
TCGA-G4-6627-01A
0 years, male, white, stage:Stage IIA, alive, 2175 days
5.6
TCGA-AZ-6608-01A
0 years, female, white, stage:Stage IIIA, dead, 59 days
5.6
TCGA-A6-2686-01A
0 years, female, white, stage:Stage IIA, dead, 1126 days
5.6
TCGA-D5-6932-01A
0 years, male, white, stage:Stage IIA, alive, 346 days
5.6
TCGA-CK-6751-01A
0 years, female, white, stage:Stage I, alive, 518 days
5.5
TCGA-CM-5348-01A
0 years, male, white, stage:Stage IIIB, alive, 699 days
5.5
TCGA-CM-5863-01A
0 years, female, white, stage:Stage IIIB, alive, 457 days
5.5
TCGA-D5-6530-01A
0 years, male, white, stage:Stage I, alive, 621 days
5.5
TCGA-D5-6534-01A
0 years, female, white, stage:Stage IIA, alive, 1316 days
5.4
TCGA-F4-6569-01A
0 years, male, white, stage:Stage I, alive, 1087 days
5.4
TCGA-A6-A566-01A
0 years, female, black or african american, stage:Stage IIIB, dead, 758 days
5.3
TCGA-DM-A28H-01A
0 years, male, white, stage:Stage IIIC, alive, 3561 days
5.3
TCGA-AZ-6599-01A
0 years, male, white, stage:Stage I, dead, 206 days
5.3
TCGA-D5-5537-01A
0 years, male, white, stage:'--, dead, 1381 days
5.3
TCGA-DM-A28C-01A
0 years, male, white, stage:Stage IIA, dead, 2475 days
5.3
TCGA-CM-6674-01A
0 years, male, white, stage:Stage IIA, alive, 394 days
5.2
TCGA-CK-4950-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 2599 days
5.1
TCGA-D5-6930-01A
0 years, male, white, stage:Stage IIA, alive, 406 days
5.1
TCGA-A6-A565-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 494 days
5.1
TCGA-CM-5861-01A
0 years, female, white, stage:Stage IIA, alive, 457 days
5.0
TCGA-AA-A02K-01A
0 years, male, stage:Stage IV, dead, 426 days
5.0
TCGA-G4-6307-01A
0 years, female, white, stage:Stage IIIB, alive, 1674 days
5.0
TCGA-AZ-6598-01A
0 years, female, white, stage:Stage II, dead, 1503 days
4.9
TCGA-F4-6461-01A
0 years, female, white, stage:Stage IIIC, dead, 338 days
4.9
TCGA-AY-6386-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 542 days
4.9
TCGA-DM-A28M-01A
0 years, male, white, stage:Stage IIA, alive, 2895 days
4.8
TCGA-G4-6306-01A
0 years, male, white, stage:'--, alive, 1359 days
4.8
TCGA-F4-6460-01A
0 years, female, white, stage:Stage IIIB, dead, 972 days
4.8
TCGA-A6-6141-01A
0 years, male, black or african american, stage:Stage IIA, alive, 255 days
4.8
TCGA-CM-5862-01A
0 years, male, white, stage:Stage IVA, dead, 153 days
4.7
TCGA-G4-6304-01A
0 years, female, white, stage:Stage IIB, alive, 1631 days
4.7
TCGA-A6-5664-01A
0 years, male, black or african american, stage:Stage IIIC, alive, 672 days
4.7
TCGA-D5-6929-01A
0 years, female, white, stage:Stage IV, alive, 408 days
4.7
TCGA-AA-A02Y-01A
0 years, male, stage:Stage I, alive, 1216 days
4.6
TCGA-A6-A5ZU-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 293 days
4.6
TCGA-CA-5255-01A
0 years, male, asian, stage:Stage IIA, alive, 376 days
4.6
TCGA-NH-A50U-01A
0 years, male, black or african american, stage:Stage IVA, dead, 334 days
4.5
TCGA-DM-A0X9-01A
0 years, female, white, stage:Stage IIA, alive, 3641 days
4.5
TCGA-RU-A8FL-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 1177 days
4.5
TCGA-DM-A282-01A
0 years, female, white, stage:Stage IIA, alive, 4233 days
4.5
TCGA-DM-A28G-01A
0 years, male, white, stage:Stage IIA, dead, 1849 days
4.5
TCGA-DM-A1HB-01A
0 years, male, white, stage:Stage IIIB, alive, 4126 days
4.4
TCGA-G4-6321-01A
0 years, female, white, stage:Stage III, alive, 672 days
4.4
TCGA-AA-3662-01A
0 years, female, stage:Stage IV, alive, 184 days
4.2
TCGA-AA-3685-01A
0 years, male, stage:Stage II, alive, 1127 days
4.2
TCGA-4N-A93T-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 146 days
4.1
TCGA-QL-A97D-01A
0 years, female, black or african american, stage:Stage I, alive, 666 days
4.1
TCGA-DM-A28K-01A
0 years, male, white, stage:Stage IIA, alive, 2988 days
4.0
TCGA-DM-A0XF-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
4.0
TCGA-CM-4743-01A
0 years, male, white, stage:Stage IIA, alive, 701 days
3.9
TCGA-AD-6889-01A
0 years, male, asian, stage:Stage IIA, dead, 2532 days
3.9
TCGA-NH-A6GC-01A
0 years, female, black or african american, stage:Stage IVB, alive, 389 days
3.9
TCGA-DM-A1DA-01A
0 years, female, white, stage:Stage IIIC, dead, 228 days
3.9
TCGA-CM-4744-01A
0 years, male, white, stage:Stage I, alive, 609 days
3.8
TCGA-G4-6322-01A
0 years, male, white, stage:Stage IIIB, alive, 792 days
3.7
TCGA-F4-6809-01A
0 years, female, white, stage:Stage IVA, dead, 403 days
3.5
TCGA-DM-A1D4-01A
0 years, male, white, stage:Stage IIA, dead, 2821 days
3.5
TCGA-G4-6320-01A
0 years, male, white, stage:Stage III, alive, 804 days
3.4
TCGA-CM-5864-01A
0 years, male, white, stage:Stage I, alive, 457 days
3.4
TCGA-DM-A1D7-01A
0 years, male, white, stage:Stage IIA, dead, 405 days
3.4
TCGA-DM-A1D8-01A
0 years, female, white, stage:'--, dead, 383 days
3.3
TCGA-DM-A280-01A
0 years, female, white, stage:Stage IIA, dead, 236 days
3.2
TCGA-CM-4751-01A
0 years, male, white, stage:Stage IIIB, alive, 822 days
3.1
TCGA-DM-A1D9-01A
0 years, female, white, stage:Stage IIA, alive, 4270 days
3.1
TCGA-DM-A0XD-01A
0 years, male, white, stage:Stage IIA, dead, 743 days
3.0
TCGA-AZ-4616-01A
0 years, female, white, stage:Stage IV, dead, 156 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMG8 is not prognostic in Colon Adenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.1
Number of samples
486
Samples
Sample
Description
TPM
U1045
0 years, female, NA, stage:T4N2M0, alive, 1239 days
26.4
U0308
0 years, male, NA, stage:T4N1M0, alive, 1075 days
24.3
U1483
0 years, female, NA, stage:T3N0M0, alive, 1094 days
20.0
U0413
0 years, male, NA, stage:T2N0M0, alive, 1228 days
19.1
U1074
0 years, male, NA, stage:T3N0M0, dead, 1043 days
18.3
U0404
0 years, female, NA, stage:T3N2M0, dead, 204 days
16.9
U2843
0 years, female, NA, stage:T3N0M0, alive, 674 days
16.8
U0427
0 years, male, NA, stage:T2N0M0, alive, 1193 days
16.6
U3042
0 years, male, NA, stage:T3N0M0, alive, 324 days
16.2
U0999
0 years, male, NA, stage:T3N2M0, alive, 860 days
15.8
U0103
0 years, female, NA, stage:T3N1M0, alive, 1197 days
15.7
U1276
0 years, male, NA, stage:T3N0M0, alive, 2474 days
15.7
U0440
0 years, female, NA, stage:T4N0M0, dead, 2743 days
15.7
U1369
0 years, male, NA, stage:T3N0M0, dead, 1604 days
15.4
U1447
0 years, male, NA, stage:T4N1M0, alive, 988 days
15.3
U0063
0 years, male, NA, stage:T1N0M0, dead, 1779 days
15.2
U1321
0 years, male, NA, stage:T3N1M0, alive, 2578 days
15.0
U0240
0 years, female, NA, stage:T3N1M0, dead, 800 days
15.0
U1344
0 years, female, NA, stage:T3N1M0, alive, 1450 days
15.0
U0285
0 years, female, NA, stage:T3N0M0, alive, 2165 days
14.8
U1292
0 years, female, NA, stage:T4N1M0, alive, 1147 days
14.8
U0209
0 years, male, NA, stage:T3N1M0, alive, 2109 days
14.7
U3005
0 years, male, NA, stage:T3N0M0, alive, 478 days
14.4
U0390
0 years, male, NA, stage:T3N1M0, alive, 871 days
14.4
U1041
0 years, male, NA, stage:T2N0M0, alive, 1108 days
14.4
U1129
0 years, male, NA, stage:T3N0M0, dead, 118 days
14.3
U0336
0 years, female, NA, stage:T3N0M0, alive, 1100 days
14.3
U0268
0 years, male, NA, stage:T3N0M0, alive, 2978 days
14.2
U0267
0 years, male, NA, stage:T4N0M0, dead, 445 days
14.2
U1250
0 years, male, NA, stage:T2N0M0, alive, 597 days
14.0
U0908
0 years, female, NA, stage:T3N0M1, dead, 40 days
14.0
U3008
0 years, female, NA, stage:T2N0M0, alive, 473 days
13.8
U1253
0 years, female, NA, stage:T3N0M0, dead, 165 days
13.7
U0123
0 years, male, NA, stage:T3N0M0, dead, 1880 days
13.7
U0112
0 years, female, NA, stage:T3N0M1, alive, 551 days
13.7
U0348
0 years, female, NA, stage:T3N0M0, alive, 533 days
13.6
U0195
0 years, male, NA, stage:T3N0M0, alive, 3326 days
13.6
U0131
0 years, female, NA, stage:T4N2M1, alive, 238 days
13.6
U0004
0 years, female, NA, stage:T4N0M0, alive, 3649 days
13.6
U0217
0 years, female, NA, stage:T3N0M0, dead, 538 days
13.6
U0288
0 years, male, NA, stage:T1N0M0, alive, 1513 days
13.5
U0244
0 years, female, NA, stage:T3N1M0, alive, 3184 days
13.5
U0463
0 years, male, NA, stage:T3N0M0, alive, 946 days
13.4
U0345
0 years, female, NA, stage:T3N0M0, alive, 2127 days
13.4
U0144
0 years, male, NA, stage:T3N0M0, alive, 1218 days
13.4
U1147
0 years, male, NA, stage:T3N0M0, dead, 282 days
13.4
U2792
0 years, male, NA, stage:T2N1M0, alive, 758 days
13.2
U0179
0 years, male, NA, stage:T3N1M0, dead, 1043 days
13.2
U0191
0 years, male, NA, stage:T3N1M0, alive, 900 days
13.2
U1047
0 years, female, NA, stage:T4N2M0, alive, 3592 days
13.2
U0938
0 years, female, NA, stage:T3N0M0, dead, 1231 days
13.1
U0316
0 years, male, NA, stage:T3N2M0, alive, 2012 days
13.1
U2995
0 years, female, NA, stage:T3N1M0, alive, 491 days
13.1
U3000
0 years, female, NA, stage:T3N0M0, alive, 584 days
13.1
U2975
0 years, male, NA, stage:T4N1M0, alive, 514 days
13.1
U1078
0 years, female, NA, stage:T3N0M0, alive, 1016 days
13.0
U0090
0 years, female, NA, stage:T3N0M0, dead, 1258 days
13.0
U0977
0 years, female, NA, stage:T4N2M0, dead, 140 days
13.0
U0108
0 years, female, NA, stage:T3N0M1, alive, 535 days
13.0
U1366
0 years, male, NA, stage:T3N1M0, alive, 2010 days
13.0
U0474
0 years, male, NA, stage:T3N1M0, alive, 1017 days
13.0
U3037
0 years, male, NA, stage:T3N1M0, alive, 405 days
12.9
U1349
0 years, female, NA, stage:T3N1M0, alive, 1899 days
12.9
U2953
0 years, female, NA, stage:T4aN0M0, alive, 541 days
12.9
U1032
0 years, male, NA, stage:T3N1M0, alive, 2113 days
12.9
U1069
0 years, female, NA, stage:T3N0M0, dead, 2187 days
12.8
U0125
0 years, female, NA, stage:T1N0M0, dead, 668 days
12.8
U0376
0 years, male, NA, stage:T2N1M0, alive, 965 days
12.8
U0183
0 years, male, NA, stage:T3N1M1, dead, 2957 days
12.8
U0110
0 years, female, NA, stage:T3N1M1, dead, 878 days
12.8
U1162
0 years, male, NA, stage:T2N1M0, dead, 354 days
12.7
U2889
0 years, male, NA, stage:T4N0M0, alive, 623 days
12.7
U0408
0 years, female, NA, stage:T4N0M0, dead, 2100 days
12.7
U2928
0 years, male, NA, stage:T2N0M0, alive, 563 days
12.7
U0177
0 years, female, NA, stage:T3N0M0, alive, 355 days
12.6
U0257
0 years, male, NA, stage:T3N1M0, dead, 2508 days
12.6
U0145
0 years, male, NA, stage:T3N1M1, alive, 623 days
12.6
U0433
0 years, male, NA, stage:T4N1M1, dead, 440 days
12.5
U2959
0 years, male, NA, stage:T3N2M0, alive, 536 days
12.5
U0253
0 years, female, NA, stage:T3N0M0, alive, 958 days
12.5
U0949
0 years, female, NA, stage:T3N0M1, dead, 594 days
12.5
U0101
0 years, male, NA, stage:T3N1M1, alive, 1878 days
12.4
U1188
0 years, female, NA, stage:T3N0M0, dead, 967 days
12.4
U0436
0 years, male, NA, stage:T4N1M1, alive, 960 days
12.4
U0224
0 years, female, NA, stage:T3N0M0, alive, 2367 days
12.4
U0370
0 years, female, NA, stage:T3N0M0, alive, 1047 days
12.4
U0306
0 years, male, NA, stage:T3N1M0, dead, 717 days
12.4
U0377
0 years, female, NA, stage:T3N2M0, alive, 3720 days
12.3
U0122
0 years, female, NA, stage:T2N0M0, dead, 159 days
12.3
U0202
0 years, male, NA, stage:T3N0M0, dead, 2670 days
12.3
U0070
0 years, male, NA, stage:T1N0M0, dead, 1319 days
12.2
U0387
0 years, male, NA, stage:T2N0M0, alive, 1327 days
12.2
U0266
0 years, female, NA, stage:T3N1M0, dead, 2221 days
12.2
U1386
0 years, male, NA, stage:T3N1M0, alive, 1518 days
12.1
U1267
0 years, male, NA, stage:T3N1M0, dead, 2869 days
12.1
U1301
0 years, female, NA, stage:T4N2M0, dead, 877 days
12.1
U0181
0 years, female, NA, stage:T1N0M0, alive, 3623 days
12.1
U0442
0 years, male, NA, stage:T3N0M0, alive, 619 days
12.0
U0236
0 years, male, NA, stage:T3N1M0, alive, 1842 days
12.0
U0303
0 years, female, NA, stage:T3N0M0, alive, 2847 days
12.0
U1127
0 years, female, NA, stage:T3N0M0, alive, 3465 days
12.0
U2882
0 years, female, NA, stage:T3N1M0, alive, 637 days
11.9
U0937
0 years, male, NA, stage:T2N0M0, dead, 1558 days
11.9
U0287
0 years, female, NA, stage:T2N0M0, alive, 1897 days
11.9
U0105
0 years, female, NA, stage:T2N0M0, dead, 2158 days
11.9
U0186
0 years, female, NA, stage:T2N0M0, alive, 3726 days
11.9
U0950
0 years, female, NA, stage:T4N1M0, alive, 1834 days
11.9
U3051
0 years, male, NA, stage:T3N2M0, alive, 415 days
11.9
U2782
0 years, male, NA, stage:T3N1M1, alive, 773 days
11.8
U0073
0 years, male, NA, stage:T4N0MX, dead, 318 days
11.8
U0141
0 years, male, NA, stage:T3N2M0, alive, 2079 days
11.8
U1239
0 years, male, NA, stage:T2N0M0, dead, 1998 days
11.8
U0292
0 years, male, NA, stage:T4N1M0, alive, 1666 days
11.7
U0464
0 years, male, NA, stage:T3N0M0, alive, 918 days
11.7
U1338
0 years, female, NA, stage:T4N1M0, dead, 716 days
11.7
U0375
0 years, male, NA, stage:T3N0M0, dead, 666 days
11.7
U1352
0 years, male, NA, stage:T3N2M1, dead, 741 days
11.7
U3039
0 years, male, NA, stage:T4N1M1, dead, 366 days
11.7
U0245
0 years, female, NA, stage:T3N1M0, dead, 564 days
11.7
U1429
0 years, female, NA, stage:T3N0M0, alive, 1660 days
11.7
U0321
0 years, female, NA, stage:T3N0M0, alive, 1029 days
11.6
U0168
0 years, male, NA, stage:T3N0M0, dead, 948 days
11.6
U2891
0 years, male, NA, stage:T3N1M0, alive, 619 days
11.6
U0151
0 years, female, NA, stage:T3N0M0, alive, 2014 days
11.6
U0467
0 years, female, NA, stage:T3N0M0, alive, 1848 days
11.6
U0207
0 years, female, NA, stage:T3N0M0, dead, 2593 days
11.6
U0182
0 years, female, NA, stage:T4N1M0, dead, 260 days
11.6
U2958
0 years, female, NA, stage:T1N0M0, alive, 536 days
11.6
U2753
0 years, female, NA, stage:T2N0M0, alive, 813 days
11.5
U0459
0 years, female, NA, stage:T3N0M0, alive, 966 days
11.5
U2780
0 years, male, NA, stage:T3N0M0, alive, 778 days
11.5
U0384
0 years, male, NA, stage:T2N1M1, alive, 1024 days
11.4
U1436
0 years, female, NA, stage:T3N0M0, alive, 1745 days
11.4
U0984
0 years, female, NA, stage:T4N0M0, alive, 1287 days
11.4
U2837
0 years, female, NA, stage:T4N1M0, alive, 681 days
11.3
U0180
0 years, male, NA, stage:T3N0M1, dead, 965 days
11.3
U0084
0 years, male, NA, stage:T3N0M0, dead, 1662 days
11.3
U1094
0 years, female, NA, stage:T4N1M0, alive, 1267 days
11.3
U0590
0 years, female, NA, stage:T3N0M0, alive, 661 days
11.3
U0069
0 years, female, NA, stage:T4N2M0, dead, 135 days
11.3
U1327
0 years, female, NA, stage:T3N0M0, alive, 1613 days
11.3
U1220
0 years, male, NA, stage:T3N2M0, dead, 1953 days
11.3
U0328
0 years, male, NA, stage:T4N0M0, dead, 1362 days
11.2
U1141
0 years, female, NA, stage:T4N1M1, dead, 596 days
11.2
U0955
0 years, female, NA, stage:T3N0M0, alive, 2170 days
11.2
U2815
0 years, female, NA, stage:T3N0M0, alive, 717 days
11.2
U1472
0 years, female, NA, stage:T3N1M0, alive, 1316 days
11.1
U0967
0 years, male, NA, stage:T2N0M0, dead, 1691 days
11.1
U0127
0 years, female, NA, stage:T3N0M0, dead, 2753 days
11.1
U0072
0 years, male, NA, stage:T3N0M0, alive, 2772 days
11.1
U0323
0 years, male, NA, stage:T2N0M0, dead, 1016 days
11.0
U0302
0 years, male, NA, stage:T1N0M0, alive, 892 days
11.0
U1065
0 years, female, NA, stage:T3N2M0, alive, 2954 days
11.0
U0396
0 years, male, NA, stage:T4N2M0, alive, 2243 days
10.9
U0246
0 years, female, NA, stage:T4N0M0, dead, 1192 days
10.9
U3029
0 years, male, NA, stage:T2N0M0, alive, 475 days
10.9
U0987
0 years, female, NA, stage:T3N0M0, alive, 2482 days
10.9
U3032
0 years, female, NA, stage:T3N1M0, alive, 449 days
10.9
U0256
0 years, male, NA, stage:T3N0M0, alive, 738 days
10.9
U0204
0 years, male, NA, stage:T3N0M0, dead, 770 days
10.9
U0249
0 years, female, NA, stage:T4N2M0, dead, 874 days
10.9
U0068
0 years, female, NA, stage:T3N1M0, alive, 1991 days
10.8
U1107
0 years, male, NA, stage:T3N0M0, alive, 329 days
10.8
U3043
0 years, female, NA, stage:T3N2M0, alive, 287 days
10.8
U0104
0 years, female, NA, stage:T4N0M0, dead, 1639 days
10.8
U0254
0 years, female, NA, stage:T3N1M0, alive, 659 days
10.8
U0441
0 years, female, NA, stage:T2N1M0, alive, 2738 days
10.8
U0471
0 years, female, NA, stage:T3N1M0, alive, 1673 days
10.8
U2942
0 years, male, NA, stage:T2N0M0, alive, 549 days
10.8
U0446
0 years, male, NA, stage:T2N0M0, alive, 1446 days
10.7
U0166
0 years, female, NA, stage:T3N0M0, alive, 763 days
10.7
U0445
0 years, female, NA, stage:T3N0M0, alive, 1851 days
10.7
U1130
0 years, male, NA, stage:T2N1M0, alive, 913 days
10.7
U1396
0 years, female, NA, stage:T4N0M0, alive, 1168 days
10.7
U0215
0 years, male, NA, stage:T3N0M0, alive, 1269 days
10.7
U0357
0 years, female, NA, stage:T3N0M0, alive, 2285 days
10.7
U0129
0 years, male, NA, stage:T4N0M0, dead, 1265 days
10.7
U0976
0 years, female, NA, stage:T3N2M0, dead, 97 days
10.7
U0460
0 years, female, NA, stage:T3N0M0, dead, 2069 days
10.7
U0453
0 years, male, NA, stage:T3N0M0, alive, 2859 days
10.7
U1252
0 years, female, NA, stage:T4N2M0, alive, 1309 days
10.6
U0389
0 years, female, NA, stage:T3N1M0, dead, 927 days
10.6
U3100
0 years, male, NA, stage:T3N1M0, dead, 1608 days
10.6
U0378
0 years, female, NA, stage:T4N1M0, dead, 815 days
10.6
U0203
0 years, male, NA, stage:T3N0M0, dead, 827 days
10.6
U1049
0 years, female, NA, stage:T3N1M0, alive, 1200 days
10.5
U0185
0 years, male, NA, stage:T1N0M0, alive, 1248 days
10.5
U0379
0 years, male, NA, stage:T2N0M0, alive, 1819 days
10.5
U1258
0 years, male, NA, stage:T3N1M0, alive, 1373 days
10.5
U3034
0 years, female, NA, stage:T3N1M0, alive, 443 days
10.5
U0225
0 years, male, NA, stage:T3N1M0, alive, 581 days
10.5
U2798
0 years, male, NA, stage:T3N0M0, alive, 751 days
10.5
U0231
0 years, female, NA, stage:T2N0M0, alive, 991 days
10.5
U0399
0 years, female, NA, stage:T4N2M0, dead, 547 days
10.5
U2861
0 years, male, NA, stage:T3N0M0, alive, 652 days
10.5
U1040
0 years, male, NA, stage:T2N0M0, alive, 1029 days
10.5
U0455
0 years, female, NA, stage:T3N2M0, alive, 2445 days
10.4
U1122
0 years, female, NA, stage:T3N2M0, alive, 1675 days
10.4
U0972
0 years, female, NA, stage:T1N0M0, alive, 2473 days
10.4
U0119
0 years, female, NA, stage:T3N0M0, alive, 3259 days
10.4
U3038
0 years, male, NA, stage:T3N0M0, alive, 328 days
10.4
U0589
0 years, female, NA, stage:T3N0M0, alive, 1176 days
10.4
U3012
0 years, male, NA, stage:T3N0M0, alive, 472 days
10.4
U1448
0 years, male, NA, stage:T3N0M1, dead, 1512 days
10.4
U0136
0 years, female, NA, stage:T3N0M0, dead, 2795 days
10.4
U1018
0 years, male, NA, stage:T4N1M1, dead, 1693 days
10.4
U0135
0 years, female, NA, stage:T3N0M0, alive, 1738 days
10.4
U1037
0 years, male, NA, stage:T4N0M0, alive, 1658 days
10.4
U1374
0 years, male, NA, stage:T4N0M0, alive, 827 days
10.3
U3024
0 years, female, NA, stage:T3N0M0, alive, 463 days
10.3
U0162
0 years, female, NA, stage:T3N0M0, alive, 1488 days
10.3
U0350
0 years, female, NA, stage:T4N0M0, alive, 770 days
10.3
U1158
0 years, female, NA, stage:T3N1M0, alive, 721 days
10.3
U1204
0 years, male, NA, stage:T4N2M0, alive, 2214 days
10.3
U1291
0 years, female, NA, stage:T3N0M0, alive, 2000 days
10.3
U1075
0 years, female, NA, stage:T3N0M0, alive, 1290 days
10.3
U2971
0 years, male, NA, stage:T4aN0M0, alive, 629 days
10.3
U0165
0 years, female, NA, stage:T2N0M0, alive, 1702 days
10.2
U0414
0 years, male, NA, stage:T3N0M0, alive, 1691 days
10.2
U0263
0 years, female, NA, stage:T3N0M1, alive, 362 days
10.2
U1432
0 years, female, NA, stage:T3N1M0, alive, 577 days
10.2
U1264
0 years, female, NA, stage:T3N0M0, dead, 1583 days
10.2
U1208
0 years, female, NA, stage:T1N0M0, alive, 834 days
10.2
U0416
0 years, male, NA, stage:T1N1M0, alive, 1228 days
10.1
U0424
0 years, male, NA, stage:T3N0M0, alive, 2192 days
10.1
U1303
0 years, male, NA, stage:T4N1M0, alive, 2283 days
10.1
U1120
0 years, male, NA, stage:T4N1M1, alive, 823 days
10.1
U0361
0 years, male, NA, stage:T3N0M0, alive, 686 days
10.1
U2896
0 years, female, NA, stage:T3N1M0, alive, 609 days
10.1
U3022
0 years, male, NA, stage:T2N0M0, alive, 484 days
10.1
U0260
0 years, male, NA, stage:T1N0M1, alive, 2928 days
10.1
U0392
0 years, male, NA, stage:T3N2M0, alive, 489 days
10.1
U0154
0 years, male, NA, stage:T3N0M0, alive, 820 days
10.0
U0332
0 years, female, NA, stage:T3N0M0, alive, 2101 days
10.0
U0320
0 years, female, NA, stage:T4N2M1, alive, 188 days
10.0
U0176
0 years, male, NA, stage:T3N1M0, alive, 2600 days
10.0
U0250
0 years, female, NA, stage:T4N0M0, dead, 906 days
10.0
U0970
0 years, female, NA, stage:T4N1M0, alive, 939 days
10.0
U1228
0 years, male, NA, stage:T3N0M0, alive, 1333 days
10.0
U0087
0 years, female, NA, stage:T3N2M0, dead, 337 days
10.0
U0235
0 years, female, NA, stage:T3N0M0, alive, 1327 days
10.0
U0942
0 years, male, NA, stage:T3N0M0, alive, 665 days
10.0
U0259
0 years, female, NA, stage:T4N2M0, alive, 76 days
9.9
U0939
0 years, male, NA, stage:T3N1M0, alive, 2960 days
9.9
U2927
0 years, male, NA, stage:T3N1M0, alive, 564 days
9.9
U0273
0 years, male, NA, stage:T2N1M0, alive, 2641 days
9.9
U0111
0 years, male, NA, stage:T2N0M0, alive, 1117 days
9.9
U2747
0 years, female, NA, stage:T4N1M0, dead, 54 days
9.9
U0148
0 years, male, NA, stage:T3N0M0, alive, 1780 days
9.9
U2848
0 years, female, NA, stage:T4N2M0, alive, 669 days
9.8
U1347
0 years, female, NA, stage:T3N0M0, alive, 1401 days
9.8
U0428
0 years, male, NA, stage:T4N1M1, alive, 1016 days
9.8
U1240
0 years, male, NA, stage:T4N0M0, alive, 765 days
9.8
U0289
0 years, female, NA, stage:T3N0M0, alive, 3511 days
9.8
U0169
0 years, male, NA, stage:T4N2M0, alive, 616 days
9.8
U0360
0 years, female, NA, stage:T3N0M0, dead, 1016 days
9.8
U0315
0 years, female, NA, stage:T2N0M0, alive, 1973 days
9.8
U0403
0 years, male, NA, stage:T3N1M1, dead, 1809 days
9.8
U0126
0 years, male, NA, stage:T3N0M0, dead, 2876 days
9.8
U1213
0 years, female, NA, stage:T2N0M0, alive, 560 days
9.7
U1446
0 years, female, NA, stage:T3N0M0, alive, 2314 days
9.7
U0146
0 years, female, NA, stage:T3N2M0, dead, 733 days
9.7
U1346
0 years, female, NA, stage:T3N0M0, alive, 1137 days
9.7
U0297
0 years, female, NA, stage:T3N2M0, alive, 1196 days
9.7
U0381
0 years, male, NA, stage:T3N1M0, dead, 71 days
9.7
U0221
0 years, male, NA, stage:T3N0M0, alive, 569 days
9.7
U0143
0 years, male, NA, stage:T3N2M0, alive, 2313 days
9.6
U0363
0 years, male, NA, stage:T3N1M0, alive, 3601 days
9.6
U0898
0 years, female, NA, stage:T4aN0M0, dead, 340 days
9.6
U0163
0 years, male, NA, stage:T4N0M0, alive, 697 days
9.6
U2902
0 years, female, NA, stage:T2N0M0, alive, 596 days
9.6
U0270
0 years, female, NA, stage:T1N0M0, alive, 2187 days
9.6
U0113
0 years, male, NA, stage:T4N2M0, alive, 1102 days
9.6
U0133
0 years, female, NA, stage:T3N0M0, alive, 773 days
9.5
U0335
0 years, female, NA, stage:T3N1M0, alive, 2464 days
9.5
U0369
0 years, female, NA, stage:T3N0M0, dead, 1095 days
9.5
U1067
0 years, male, NA, stage:T3N0M0, alive, 1570 days
9.5
U1201
0 years, male, NA, stage:T3N2M0, alive, 1484 days
9.5
U1060
0 years, male, NA, stage:T3N0M0, alive, 2442 days
9.5
U0352
0 years, female, NA, stage:T4N2M0, dead, 385 days
9.5
U2947
0 years, female, NA, stage:T3N0M0, alive, 543 days
9.5
U0444
0 years, female, NA, stage:T4N1M0, alive, 1841 days
9.5
U0227
0 years, female, NA, stage:T4N2M0, alive, 291 days
9.5
U1454
0 years, female, NA, stage:T3N0M0, alive, 393 days
9.5
U0222
0 years, female, NA, stage:T3N2M1, alive, 1779 days
9.5
U0386
0 years, female, NA, stage:T4N1M1, alive, 2592 days
9.5
U1421
0 years, female, NA, stage:T3N1M0, alive, 1905 days
9.5
U0153
0 years, female, NA, stage:T3N0M0, dead, 1718 days
9.4
U0156
0 years, female, NA, stage:T4N1M0, alive, 1573 days
9.4
U1274
0 years, male, NA, stage:T2N1M0, alive, 1198 days
9.4
U0158
0 years, male, NA, stage:T1N0M0, dead, 3101 days
9.4
U0448
0 years, male, NA, stage:T3N2M0, alive, 3615 days
9.4
U0091
0 years, male, NA, stage:T3N0M0, alive, 520 days
9.4
U0210
0 years, male, NA, stage:T3N0M0, dead, 1800 days
9.4
U1401
0 years, female, NA, stage:T3N0M0, alive, 1482 days
9.4
U1392
0 years, male, NA, stage:T3N0M0, alive, 1513 days
9.4
U1034
0 years, male, NA, stage:T4N0M0, alive, 1575 days
9.4
U0317
0 years, female, NA, stage:T3N2M0, alive, 3209 days
9.3
U1474
0 years, female, NA, stage:T1N0MX, alive, 2012 days
9.3
U0066
0 years, male, NA, stage:T3N0M0, dead, 2486 days
9.3
U1104
0 years, female, NA, stage:T4N0M0, alive, 1109 days
9.3
U0229
0 years, female, NA, stage:TXN2M1, dead, 2115 days
9.3
U2981
0 years, male, NA, stage:T3N0M0, alive, 508 days
9.3
U3122
0 years, female, NA, stage:T3N0M1, dead, 91 days
9.3
U0208
0 years, female, NA, stage:T3N1M0, dead, 1233 days
9.3
U0098
0 years, male, NA, stage:T3N0M0, dead, 2473 days
9.2
U0239
0 years, male, NA, stage:T2N0M0, alive, 67 days
9.2
U0319
0 years, male, NA, stage:T3N0M0, alive, 2801 days
9.2
U0465
0 years, male, NA, stage:T3N0M0, alive, 2383 days
9.2
U0085
0 years, male, NA, stage:T4N1M0, dead, 1698 days
9.2
U2999
0 years, female, NA, stage:T2N0M0, alive, 581 days
9.2
U0368
0 years, male, NA, stage:T2N0M0, alive, 801 days
9.2
U1062
0 years, female, NA, stage:T4N0M0, alive, 1689 days
9.2
U2754
0 years, male, NA, stage:T4N0M0, alive, 809 days
9.2
U0075
0 years, male, NA, stage:T3N0M0, dead, 3 days
9.2
U1150
0 years, female, NA, stage:T3N0M0, alive, 15 days
9.1
U2948
0 years, female, NA, stage:T3N1M0, alive, 543 days
9.1
U0421
0 years, male, NA, stage:T3N1M0, alive, 674 days
9.1
U1155
0 years, male, NA, stage:T4N1M0, alive, 1815 days
9.1
U1473
0 years, female, NA, stage:T3N0M0, alive, 1553 days
9.1
U0438
0 years, female, NA, stage:T3N0M0, alive, 2009 days
9.1
U2979
0 years, male, NA, stage:T3N2M0, alive, 616 days
9.1
U0121
0 years, male, NA, stage:T4N2M0, alive, 655 days
9.1
U0439
0 years, male, NA, stage:T3N1M0, alive, 1418 days
9.1
U2774
0 years, female, NA, stage:T3N0M0, alive, 783 days
9.1
U0307
0 years, male, NA, stage:T3N0M0, alive, 2921 days
9.0
U0435
0 years, female, NA, stage:T2N0M0, alive, 3616 days
9.0
U0189
0 years, female, NA, stage:T3N0M0, dead, 1823 days
9.0
U0451
0 years, female, NA, stage:T4N2M0, alive, 3023 days
9.0
U0349
0 years, male, NA, stage:T3N1M0, alive, 2682 days
9.0
U0134
0 years, male, NA, stage:T3N0M0, alive, 2009 days
9.0
U0218
0 years, female, NA, stage:T3N0M0, alive, 714 days
9.0
U1007
0 years, male, NA, stage:T3N0M0, alive, 1333 days
9.0
U0295
0 years, male, NA, stage:T3N0M0, dead, 2572 days
8.9
U1059
0 years, male, NA, stage:T3N1M0, alive, 2790 days
8.9
U0082
0 years, female, NA, stage:T3N1M0, dead, 2339 days
8.9
U0397
0 years, male, NA, stage:T4N0M0, alive, 1663 days
8.9
U0175
0 years, male, NA, stage:T3N2M0, alive, 1875 days
8.9
U0473
0 years, male, NA, stage:T3N1M0, alive, 786 days
8.9
U0198
0 years, male, NA, stage:T3N1M0, alive, 1272 days
8.9
U0382
0 years, female, NA, stage:T3N0M0, alive, 2550 days
8.9
U1031
0 years, male, NA, stage:T1N1M0, alive, 1625 days
8.9
U0309
0 years, female, NA, stage:T3N0M0, dead, 1898 days
8.9
U0178
0 years, female, NA, stage:T3N1M0, dead, 2096 days
8.9
U0117
0 years, female, NA, stage:T2N0M0, dead, 1078 days
8.9
U0472
0 years, male, NA, stage:TXN2M0, alive, 542 days
8.9
U0933
0 years, male, NA, stage:T3N2M0, dead, 1960 days
8.8
U0100
0 years, female, NA, stage:T3N0M0, dead, 1920 days
8.8
U1304
0 years, female, NA, stage:TXNXM0, alive, 1081 days
8.8
U0247
0 years, female, NA, stage:T3N1M0, alive, 2538 days
8.8
U0269
0 years, female, NA, stage:T3N0M0, alive, 2530 days
8.8
U0124
0 years, female, NA, stage:T1N0M0, alive, 2430 days
8.8
U0115
0 years, female, NA, stage:T3N0M0, dead, 1738 days
8.8
U0429
0 years, female, NA, stage:T3N0M1, alive, 1099 days
8.8
U0354
0 years, male, NA, stage:T3N1M0, alive, 430 days
8.7
U0398
0 years, female, NA, stage:T3N0M0, alive, 721 days
8.7
U0426
0 years, male, NA, stage:T3N0M0, dead, 976 days
8.7
U0338
0 years, female, NA, stage:T3N0M0, alive, 1016 days
8.6
U0394
0 years, male, NA, stage:T2N1M0, alive, 969 days
8.6
U0447
0 years, male, NA, stage:T4N1M0, dead, 1819 days
8.6
U1332
0 years, male, NA, stage:T3N0M0, alive, 1672 days
8.6
U0223
0 years, male, NA, stage:T4N1M0, alive, 1812 days
8.6
U0290
0 years, male, NA, stage:T4N2M0, dead, 593 days
8.6
U1184
0 years, male, NA, stage:T4N1M0, alive, 290 days
8.6
U3018
0 years, male, NA, stage:T4N1M0, alive, 463 days
8.6
U0187
0 years, male, NA, stage:T3N2M0, alive, 1632 days
8.5
U0157
0 years, male, NA, stage:T4N0M0, dead, 131 days
8.5
U1145
0 years, female, NA, stage:T3N0M0, dead, 445 days
8.5
U0882
0 years, male, NA, stage:T3N0M0, alive, 1675 days
8.5
U0400
0 years, male, NA, stage:T4N0M0, dead, 1073 days
8.5
U0149
0 years, female, NA, stage:T3N2M0, alive, 1715 days
8.5
U0358
0 years, female, NA, stage:T4N1M0, alive, 2290 days
8.5
U0356
0 years, male, NA, stage:T4N1M0, alive, 536 days
8.5
U0327
0 years, male, NA, stage:T4N0M0, alive, 833 days
8.4
U0211
0 years, female, NA, stage:T3N1M0, alive, 1236 days
8.4
U0167
0 years, male, NA, stage:T3N1M0, alive, 1820 days
8.4
U2819
0 years, female, NA, stage:T3N0M0, alive, 708 days
8.4
U0171
0 years, female, NA, stage:T3N1M0, dead, 1920 days
8.4
U0152
0 years, male, NA, stage:T3N1M0, alive, 989 days
8.3
U0966
0 years, male, NA, stage:T4N0M0, dead, 1513 days
8.3
U0449
0 years, female, NA, stage:T3N0M0, alive, 1851 days
8.3
U0456
0 years, male, NA, stage:T4N0M0, dead, 2222 days
8.3
U1102
0 years, male, NA, stage:T2N0M0, alive, 1354 days
8.3
U0199
0 years, female, NA, stage:T4N2M0, alive, 1372 days
8.3
U0278
0 years, female, NA, stage:T2N0M0, alive, 763 days
8.2
U1073
0 years, female, NA, stage:T3N1M0, alive, 1359 days
8.2
U2935
0 years, male, NA, stage:T4N1M0, alive, 555 days
8.2
U1086
0 years, female, NA, stage:T1N0M0, alive, 2907 days
8.2
U3048
0 years, male, NA, stage:T4N2M0, alive, 535 days
8.2
U0340
0 years, female, NA, stage:T4N2M1, dead, 438 days
8.2
U0993
0 years, male, NA, stage:T4N2M0, alive, 1267 days
8.2
U0099
0 years, female, NA, stage:T3N0M0, dead, 986 days
8.2
U0089
0 years, female, NA, stage:T1NXM0, dead, 2365 days
8.1
U0274
0 years, male, NA, stage:T3N0M0, dead, 1570 days
8.1
U0067
0 years, female, NA, stage:T3N0M0, alive, 2180 days
8.1
U0373
0 years, female, NA, stage:T3N0M0, alive, 1822 days
8.0
U0109
0 years, female, NA, stage:T4N2M1, alive, 144 days
8.0
U0347
0 years, female, NA, stage:T4N1M1, alive, 628 days
8.0
U0312
0 years, female, NA, stage:T4N2M1, alive, 499 days
8.0
U0142
0 years, female, NA, stage:T4N1M0, alive, 2340 days
7.9
U0383
0 years, male, NA, stage:T3N2M1, dead, 595 days
7.9
U3050
0 years, female, NA, stage:T3N0M0, alive, 407 days
7.9
U0094
0 years, female, NA, stage:T3N2M0, alive, 741 days
7.9
U0078
0 years, female, NA, stage:T3N0M0, alive, 1183 days
7.9
U1212
0 years, female, NA, stage:T2N0M0, alive, 69 days
7.9
U0002
0 years, female, NA, stage:T3N2M0, alive, 3691 days
7.9
U0170
0 years, male, NA, stage:T4N1M0, dead, 832 days
7.8
U0081
0 years, male, NA, stage:T3N2M0, dead, 248 days
7.8
U1095
0 years, female, NA, stage:T3N1M1, alive, 2425 days
7.8
U0095
0 years, male, NA, stage:T4N1M0, dead, 1034 days
7.7
U0333
0 years, female, NA, stage:T3N2M0, dead, 1959 days
7.7
U1022
0 years, male, NA, stage:T4N2M0, dead, 61 days
7.7
U2956
0 years, female, NA, stage:T3N0M0, alive, 540 days
7.7
U0277
0 years, male, NA, stage:T2N1M0, alive, 270 days
7.7
U0314
0 years, female, NA, stage:T1N0M0, dead, 2436 days
7.7
U0092
0 years, male, NA, stage:T3N0M0, alive, 2779 days
7.7
U0275
0 years, female, NA, stage:T3N2M0, alive, 549 days
7.7
U0083
0 years, male, NA, stage:T4N0M0, dead, 731 days
7.7
U0916
0 years, female, NA, stage:T3N0M0, alive, 1578 days
7.6
U0313
0 years, male, NA, stage:T4N1M0, dead, 1142 days
7.6
U1044
0 years, male, NA, stage:T4N0M0, alive, 3146 days
7.6
U1071
0 years, female, NA, stage:T4N0M1, alive, 1514 days
7.6
U1160
0 years, male, NA, stage:T3N1M0, alive, 1557 days
7.6
U1343
0 years, female, NA, stage:T4N2M0, alive, 3178 days
7.5
U1486
0 years, female, NA, stage:T4N0M0, alive, 1606 days
7.5
U0106
0 years, female, NA, stage:T3N1M0, dead, 653 days
7.5
U0281
0 years, male, NA, stage:T3N2M0, alive, 933 days
7.5
U0469
0 years, male, NA, stage:T3N0M0, dead, 409 days
7.5
U2803
0 years, male, NA, stage:T3N1M0, alive, 744 days
7.5
U0934
0 years, female, NA, stage:T3N0M0, alive, 1185 days
7.5
U1013
0 years, female, NA, stage:T2N1M0, alive, 1439 days
7.4
U0450
0 years, female, NA, stage:T3N1M0, alive, 763 days
7.4
U1103
0 years, female, NA, stage:T4N2M0, alive, 975 days
7.4
U1111
0 years, female, NA, stage:T3N0M0, dead, 1631 days
7.4
U0300
0 years, male, NA, stage:T2N0M0, alive, 974 days
7.4
U0991
0 years, male, NA, stage:T4N2M0, dead, 534 days
7.4
U0342
0 years, male, NA, stage:T4N2M0, alive, 305 days
7.4
U2856
0 years, female, NA, stage:T4N1M1, alive, 660 days
7.3
U0385
0 years, male, NA, stage:T3N0M0, alive, 902 days
7.3
U0443
0 years, male, NA, stage:T3N0M0, alive, 1677 days
7.3
U1017
0 years, male, NA, stage:T3N0M0, alive, 615 days
7.3
U0401
0 years, male, NA, stage:T4N1M0, alive, 1715 days
7.2
U0367
0 years, female, NA, stage:T3N1M0, alive, 3075 days
7.2
U0252
0 years, male, NA, stage:T3N1M0, dead, 1761 days
7.2
U1257
0 years, male, NA, stage:T3N0M0, alive, 833 days
7.2
U3025
0 years, male, NA, stage:T4N2M1, alive, 377 days
7.1
U0107
0 years, male, NA, stage:T3N0M0, dead, 2354 days
7.1
U0172
0 years, male, NA, stage:T4N0M0, dead, 678 days
7.1
U0411
0 years, female, NA, stage:T3N1M0, alive, 1868 days
7.0
U1099
0 years, female, NA, stage:T3N0M0, alive, 2068 days
7.0
U0929
0 years, male, NA, stage:T4N1M0, alive, 436 days
7.0
U1241
0 years, male, NA, stage:T3N1M0, dead, 49 days
7.0
U0102
0 years, female, NA, stage:T4N2M0, dead, 670 days
7.0
U2842
0 years, female, NA, stage:T4N2M0, alive, 675 days
6.8
U0960
0 years, male, NA, stage:T3N0M0, alive, 1009 days
6.8
U0214
0 years, male, NA, stage:T4N1M1, alive, 788 days
6.7
U1072
0 years, male, NA, stage:T1N0M0, alive, 1446 days
6.6
U1114
0 years, female, NA, stage:TXNXM1, dead, 473 days
6.5
U0362
0 years, male, NA, stage:T3N0M0, alive, 1148 days
6.5
U0196
0 years, male, NA, stage:T3N0M0, alive, 2086 days
6.4
U0318
0 years, male, NA, stage:T3N0M0, alive, 762 days
6.4
U1251
0 years, male, NA, stage:T4N2M0, alive, 126 days
6.4
U0161
0 years, male, NA, stage:T4N2M1, alive, 42 days
6.2
U1246
0 years, female, NA, stage:T3N0M0, alive, 1441 days
6.1
U1183
0 years, male, NA, stage:T4N2M0, alive, 959 days
6.1
U0262
0 years, female, NA, stage:T2N0M0, alive, 2534 days
6.0
U2964
0 years, male, NA, stage:T3N1M0, alive, 637 days
6.0
U0248
0 years, male, NA, stage:T3N0M0, alive, 1870 days
6.0
U0915
0 years, female, NA, stage:T3N0M0, alive, 1613 days
6.0
U0280
0 years, male, NA, stage:T3N1M1, alive, 2731 days
6.0
U0420
0 years, male, NA, stage:T4N1M1, alive, 417 days
5.9
U0233
0 years, female, NA, stage:T3N1M0, alive, 975 days
5.9
U1046
0 years, female, NA, stage:T4N2M1, dead, 697 days
5.8
U3030
0 years, female, NA, stage:T3N0M0, alive, 380 days
5.8
U0193
0 years, male, NA, stage:T3N1M0, dead, 876 days
5.7
U0234
0 years, male, NA, stage:T1N1M0, alive, 990 days
5.7
U0462
0 years, female, NA, stage:T4N1M0, alive, 1017 days
5.7
U1317
0 years, male, NA, stage:T4N1M0, alive, 965 days
5.6
U0344
0 years, male, NA, stage:T2N1M0, dead, 818 days
5.5
U0326
0 years, female, NA, stage:T3N0M0, alive, 3178 days
5.5
U0365
0 years, female, NA, stage:T4N1M0, dead, 313 days
5.2
U0355
0 years, male, NA, stage:T4N1M0, dead, 1038 days
5.1
U1235
0 years, female, NA, stage:T2N0M0, alive, 1319 days
4.0
U0200
0 years, female, NA, stage:T3N0M0, alive, 2614 days
3.5
U1384
0 years, male, NA, stage:T4N1M0, alive, 1319 days
0.4
U0074
0 years, female, NA, stage:T3N0M0, dead, 1438 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMG8 is not prognostic in Rectum Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.2
Number of samples
88
Samples
Sample
Description
TPM
TCGA-AH-6897-01A
0 years, male, white, stage:Stage I, alive, 804 days
15.3
TCGA-AH-6643-01A
0 years, male, white, stage:Stage IIIC, dead, 1314 days
12.7
TCGA-EI-6885-01A
0 years, female, white, stage:Stage IV, alive, 415 days
12.3
TCGA-DC-6682-01A
0 years, male, white, stage:Stage IIA, alive, 762 days
12.0
TCGA-AG-3731-01A
0 years, male, stage:Stage IV, alive, 1126 days
11.8
TCGA-AH-6644-01A
0 years, male, white, stage:'--, alive, 838 days
11.5
TCGA-DC-6160-01A
0 years, male, white, stage:Stage I, alive, 1339 days
11.1
TCGA-EI-7002-01A
0 years, male, white, stage:Stage IV, alive, 364 days
11.0
TCGA-CI-6622-01A
0 years, male, white, stage:Stage IIB, alive, 1362 days
10.7
TCGA-F5-6811-01A
0 years, female, white, stage:Stage IIA, alive, 979 days
9.7
TCGA-DC-6683-01A
0 years, male, white, stage:Stage IIIB, alive, 762 days
9.6
TCGA-AH-6549-01A
0 years, male, white, stage:'--, alive, 532 days
9.5
TCGA-CI-6621-01A
0 years, male, white, stage:Stage IIIB, alive, 419 days
9.3
TCGA-AF-2687-01A
0 years, male, white, stage:Stage IIIC, alive, 1427 days
9.1
TCGA-CI-6620-01A
0 years, female, white, stage:Stage IVA, alive, 1009 days
8.9
TCGA-EI-6882-01A
0 years, male, white, stage:Stage IIA, alive, 262 days
8.9
TCGA-EI-6513-01A
0 years, male, white, stage:Stage IIIB, alive, 497 days
8.8
TCGA-DC-6157-01A
0 years, male, black or african american, stage:Stage I, alive, 1581 days
8.7
TCGA-DC-6156-01A
0 years, male, white, stage:Stage IVA, alive, 943 days
8.6
TCGA-DC-6154-01A
0 years, female, white, stage:Stage IVA, alive, 365 days
8.6
TCGA-EI-6506-01A
0 years, female, white, stage:Stage IIA, alive, 625 days
8.6
TCGA-DC-6681-01A
0 years, female, white, stage:Stage IVA, alive, 790 days
8.5
TCGA-G5-6235-01A
0 years, male, white, stage:Stage IIIB, alive, 1696 days
8.5
TCGA-F5-6465-01A
0 years, female, white, stage:Stage IIA, alive, 1506 days
8.4
TCGA-F5-6864-01A
0 years, female, white, stage:Stage IIIB, alive, 379 days
8.3
TCGA-AF-6655-01A
0 years, male, white, stage:Stage IIIA, alive, 609 days
8.3
TCGA-EI-6514-01A
0 years, female, white, stage:Stage IIA, alive, 496 days
8.3
TCGA-CL-5917-01A
0 years, female, white, stage:Stage IIIC, alive, 2376 days
8.3
TCGA-EI-6917-01A
0 years, male, white, stage:Stage IIIA, alive, 531 days
8.2
TCGA-F5-6814-01A
0 years, male, white, stage:Stage IIA, alive, 1131 days
8.1
TCGA-AG-3592-01A
0 years, male, stage:Stage IIA, alive, 1035 days
7.9
TCGA-AH-6903-01A
0 years, male, white, stage:Stage IIIB, alive, 592 days
7.9
TCGA-DC-6158-01A
0 years, male, white, stage:Stage I, dead, 334 days
7.8
TCGA-EI-6512-01A
0 years, female, white, stage:Stage IIIB, alive, 538 days
7.8
TCGA-DC-5869-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 943 days
7.8
TCGA-CL-4957-01A
0 years, female, stage:'--, dead, 425 days
7.8
TCGA-DY-A1DE-01A
0 years, female, white, stage:Stage IIA, alive, 3932 days
7.7
TCGA-DC-4749-01A
0 years, male, white, stage:Stage I, alive, 762 days
7.7
TCGA-F5-6702-01A
0 years, male, white, stage:Stage IVA, dead, 869 days
7.7
TCGA-AG-3742-01A
0 years, female, stage:Stage I, alive, 30 days
7.7
TCGA-G5-6572-01A
0 years, male, white, stage:'--, dead, 1432 days
7.6
TCGA-F5-6861-01A
0 years, female, white, stage:Stage IIA, alive, 1160 days
7.5
TCGA-AG-4022-01A
0 years, female, stage:Stage II, alive, 1400 days
7.5
TCGA-DY-A0XA-01A
0 years, female, white, stage:Stage IIA, alive, 3846 days
7.5
TCGA-F5-6464-01A
0 years, female, white, stage:Stage IIIC, dead, 303 days
7.4
TCGA-AF-A56K-01A
0 years, male, black or african american, stage:Stage IIA, alive, 2635 days
7.4
TCGA-EI-6507-01A
0 years, male, white, stage:Stage IIA, alive, 607 days
7.4
TCGA-EI-6510-01A
0 years, female, white, stage:'--, alive, 556 days
7.4
TCGA-AF-2693-01A
0 years, male, white, stage:Stage I, alive, 1155 days
7.2
TCGA-EI-7004-01A
0 years, female, white, stage:'--, alive, 257 days
7.2
TCGA-F5-6863-01A
0 years, female, white, stage:Stage IIIB, dead, 361 days
7.0
TCGA-F5-6813-01A
0 years, male, white, stage:Stage IIIC, dead, 598 days
7.0
TCGA-EI-6883-01A
0 years, male, white, stage:Stage IIC, alive, 350 days
7.0
TCGA-EI-6884-01A
0 years, male, white, stage:Stage IIIA, alive, 328 days
7.0
TCGA-AG-4021-01A
0 years, female, stage:Stage IV, dead, 121 days
6.9
TCGA-EF-5830-01A
0 years, male, white, stage:Stage IIB, alive, 106 days
6.9
TCGA-AF-3911-01A
0 years, male, white, stage:Stage IIIC, alive, 1148 days
6.9
TCGA-AG-3732-01A
0 years, female, stage:Stage I, alive, 1003 days
6.8
TCGA-AF-A56N-01A
0 years, female, black or african american, stage:Stage IIA, alive, 360 days
6.8
TCGA-AF-2690-01A
0 years, female, white, stage:Stage IIIC, dead, 524 days
6.7
TCGA-EI-6511-01A
0 years, male, white, stage:Stage IIIB, alive, 482 days
6.6
TCGA-F5-6571-01A
0 years, female, white, stage:Stage IIA, alive, 1288 days
6.3
TCGA-AH-6544-01A
0 years, male, white, stage:'--, alive, 1173 days
6.3
TCGA-EI-6881-01A
0 years, male, white, stage:Stage IIIA, alive, 499 days
6.1
TCGA-AF-6136-01A
0 years, female, white, stage:Stage IIIB, alive, 741 days
6.0
TCGA-AH-6547-01A
0 years, female, white, stage:'--, dead, 76 days
6.0
TCGA-EI-6508-01A
0 years, female, white, stage:Stage IIIB, alive, 636 days
5.8
TCGA-AF-6672-01A
0 years, male, white, stage:Stage IV, alive, 748 days
5.7
TCGA-G5-6641-01A
0 years, male, white, stage:Stage IIIA, alive, 804 days
5.6
TCGA-AF-4110-01A
0 years, male, white, stage:Stage IVA, alive, 912 days
5.5
TCGA-AF-5654-01A
0 years, female, white, stage:Stage I, dead, 512 days
5.4
TCGA-DC-5337-01A
0 years, male, white, stage:Stage I, alive, 792 days
5.3
TCGA-EF-5831-01A
0 years, male, white, stage:Stage IIA, alive, 127 days
5.2
TCGA-DC-4745-01A
0 years, female, white, stage:Stage IIIB, alive, 639 days
5.2
TCGA-F5-6812-01A
0 years, male, white, stage:Stage IIA, alive, 1110 days
5.0
TCGA-G5-6233-01A
0 years, male, white, stage:'--, dead, 556 days
4.9
TCGA-AG-3902-01A
0 years, male, stage:Stage IIA, alive, 974 days
4.8
TCGA-AF-A56L-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2007 days
4.7
TCGA-AG-3591-01A
0 years, female, stage:Stage IIA, alive, 1035 days
4.6
TCGA-EI-6509-01A
0 years, male, white, stage:Stage IIIC, alive, 517 days
4.2
TCGA-DY-A1DG-01A
0 years, male, white, stage:Stage IVA, dead, 1566 days
4.2
TCGA-DY-A1DC-01A
0 years, female, white, stage:Stage IIA, dead, 1258 days
4.0
TCGA-DY-A1DD-01A
0 years, female, white, stage:Stage IIIB, dead, 1741 days
3.1
TCGA-BM-6198-01A
0 years, male, white, stage:Stage IIIB, alive, 646 days
2.5
TCGA-DT-5265-01A
0 years, male, asian, stage:Stage II, alive, 384 days
2.0
TCGA-DY-A1H8-01A
0 years, female, white, stage:Stage IIIA, dead, 992 days
1.3
TCGA-DY-A1DF-01A
0 years, female, white, stage:Stage IIIC, dead, 734 days
0.9
TCGA-DC-6155-01A
0 years, female, white, stage:Stage IIIA, alive, 425 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMG8 is not prognostic in Rectum Adenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.2
Number of samples
207
Samples
Sample
Description
TPM
U0695
0 years, male, NA, stage:T3N0M0, alive, 566 days
17.8
U2764
0 years, male, NA, stage:T3N2M0, alive, 440 days
16.7
U0001
0 years, female, NA, stage:T3N0M0, alive, 3188 days
15.5
U0174
0 years, male, NA, stage:T3N0M0, alive, 450 days
14.9
U0638
0 years, male, NA, stage:T2N0M0, alive, 1801 days
14.8
U0852
0 years, male, NA, stage:T3N2M1, alive, 1651 days
14.6
U0468
0 years, female, NA, stage:T3N0M0, alive, 1921 days
14.4
U0296
0 years, male, NA, stage:T3N0M0, alive, 2610 days
14.3
U0216
0 years, male, NA, stage:T2N0M0, alive, 2684 days
14.3
U0304
0 years, male, NA, stage:T3N2M0, alive, 2065 days
14.3
U0230
0 years, female, NA, stage:T1N1M0, alive, 3152 days
13.8
U0374
0 years, female, NA, stage:T2N0M0, alive, 1067 days
13.7
U0484
0 years, male, NA, stage:T4N2M0, alive, 1275 days
13.6
U0406
0 years, female, NA, stage:T4N2M1, dead, 778 days
13.4
U2834
0 years, male, NA, stage:T3N1M0, alive, 323 days
13.2
U0305
0 years, male, NA, stage:T3N1M0, alive, 2676 days
12.8
U0173
0 years, male, NA, stage:T2N0M0, dead, 2375 days
12.7
U0637
0 years, male, NA, stage:T3N1M0, alive, 1997 days
12.6
U0079
0 years, male, NA, stage:T4N2M0, dead, 1891 days
12.5
U0466
0 years, male, NA, stage:T3N0M0, alive, 1381 days
12.4
U0553
0 years, female, NA, stage:T3N2M0, alive, 1704 days
12.3
U0861
0 years, female, NA, stage:T4N2M1, dead, 184 days
12.1
U0423
0 years, female, NA, stage:T4N2M0, alive, 2735 days
12.1
U0077
0 years, female, NA, stage:T2N0M0, dead, 588 days
12.0
U0405
0 years, male, NA, stage:T3N1M0, alive, 829 days
12.0
U0565
0 years, male, NA, stage:T4N1M0, alive, 1452 days
11.9
U0654
0 years, male, NA, stage:T3N2M0, alive, 1220 days
11.9
U0331
0 years, male, NA, stage:T3N1M1, dead, 906 days
11.9
U0713
0 years, male, NA, stage:T2N0M0, alive, 359 days
11.7
U0371
0 years, female, NA, stage:T3N0M0, alive, 2688 days
11.7
U0555
0 years, male, NA, stage:T3N2M0, alive, 2043 days
11.6
U0276
0 years, male, NA, stage:T3N1M1, alive, 934 days
11.5
U2761
0 years, female, NA, stage:T3N1M0, alive, 447 days
11.4
U0651
0 years, male, NA, stage:T3N0M0, alive, 1354 days
11.3
U0545
0 years, male, NA, stage:T3N0M0, alive, 2340 days
11.3
U0220
0 years, male, NA, stage:T2N0M0, alive, 1066 days
11.3
U0258
0 years, male, NA, stage:T4N1M2, dead, 195 days
11.2
U2972
0 years, male, NA, stage:T3N0M0, alive, 161 days
11.1
U0213
0 years, male, NA, stage:T3N1M0, alive, 3018 days
11.1
U0849
0 years, female, NA, stage:T4N0M1, dead, 267 days
11.1
U0512
0 years, male, NA, stage:T3N0M0, alive, 2550 days
11.1
U0030
0 years, female, NA, stage:T2N0M0, dead, 987 days
11.0
U0591
0 years, male, NA, stage:T2N0M0, alive, 1023 days
11.0
U0255
0 years, female, NA, stage:T3N2M0, dead, 1079 days
11.0
U2943
0 years, male, NA, stage:T3N0M0, alive, 189 days
10.9
U0557
0 years, female, NA, stage:T3N2M0, alive, 2009 days
10.8
U0642
0 years, male, NA, stage:T3N0M0, alive, 1603 days
10.8
U0232
0 years, female, NA, stage:T2N0M0, dead, 994 days
10.8
U0652
0 years, male, NA, stage:T3N0M0, alive, 1319 days
10.7
U0237
0 years, male, NA, stage:T3N1M0, alive, 2492 days
10.7
U2960
0 years, male, NA, stage:T3N1M0, alive, 176 days
10.7
U0595
0 years, male, NA, stage:T2N0M0, alive, 2535 days
10.7
U0809
0 years, female, NA, stage:T3N1M1, dead, 275 days
10.6
U0096
0 years, female, NA, stage:T4N2M1, dead, 257 days
10.6
U0430
0 years, male, NA, stage:T3N2M0, dead, 2472 days
10.5
U2836
0 years, male, NA, stage:T3N0M0, alive, 322 days
10.5
U0862
0 years, male, NA, stage:T4N2M1, dead, 1064 days
10.4
U0137
0 years, male, NA, stage:T3N1M0, dead, 1799 days
10.4
U0132
0 years, male, NA, stage:T3N1M0, alive, 1798 days
10.3
U0776
0 years, male, NA, stage:T4N2M0, alive, 1702 days
10.3
U0532
0 years, male, NA, stage:T3N0M0, dead, 730 days
10.3
U0343
0 years, female, NA, stage:T2N0M0, alive, 701 days
10.3
U0120
0 years, female, NA, stage:T3N0M0, alive, 3233 days
10.2
U0657
0 years, female, NA, stage:T2N0M0, dead, 1109 days
10.1
U0494
0 years, male, NA, stage:T4N2M0, alive, 1290 days
10.1
U0138
0 years, male, NA, stage:T3N1M0, dead, 2472 days
10.1
U0675
0 years, female, NA, stage:T4N1M0, dead, 89 days
10.1
U0118
0 years, female, NA, stage:T3N2M0, dead, 350 days
10.1
U0241
0 years, female, NA, stage:T2N1M0, alive, 552 days
10.0
U0116
0 years, male, NA, stage:T3N1M0, dead, 930 days
9.9
U0192
0 years, male, NA, stage:T3N0M0, alive, 2081 days
9.9
U0581
0 years, female, NA, stage:T3N2M0, alive, 1660 days
9.9
U0282
0 years, male, NA, stage:T3N2M0, dead, 1869 days
9.8
U0561
0 years, female, NA, stage:T3N2M0, alive, 1577 days
9.8
U0391
0 years, female, NA, stage:T3N0M0, alive, 1179 days
9.7
U0602
0 years, male, NA, stage:T2N0M0, alive, 1385 days
9.7
U2955
0 years, male, NA, stage:T3N1M0, alive, 181 days
9.7
U0643
0 years, female, NA, stage:T2N1M0, dead, 1583 days
9.7
U0228
0 years, male, NA, stage:T2N0M0, alive, 963 days
9.7
U0380
0 years, male, NA, stage:T2N0M0, alive, 2155 days
9.6
U0498
0 years, female, NA, stage:T4N1M0, alive, 1906 days
9.6
U2994
0 years, female, NA, stage:T4N1M0, alive, 132 days
9.5
U0264
0 years, male, NA, stage:T4N2M0, alive, 2020 days
9.5
U0649
0 years, male, NA, stage:T2N0M0, alive, 1424 days
9.5
U0238
0 years, male, NA, stage:T3N0M0, dead, 868 days
9.5
U0663
0 years, female, NA, stage:T3N1M0, alive, 762 days
9.4
U3023
0 years, female, NA, stage:T2N0M0, alive, 404 days
9.4
U0572
0 years, female, NA, stage:T3N1M0, alive, 2621 days
9.4
U0284
0 years, male, NA, stage:T3N2M0, alive, 581 days
9.4
U0535
0 years, female, NA, stage:T4N1M0, alive, 2473 days
9.3
U0293
0 years, male, NA, stage:T3N1M0, alive, 2717 days
9.3
U0147
0 years, female, NA, stage:T3N0M0, dead, 2085 days
9.3
U0707
0 years, male, NA, stage:T3N1M0, alive, 518 days
9.2
U0351
0 years, female, NA, stage:T3N2M0, alive, 2886 days
9.2
U0114
0 years, male, NA, stage:T3N0M0, alive, 1910 days
9.2
U3047
0 years, male, NA, stage:T3N2M0, alive, 205 days
9.2
U0415
0 years, male, NA, stage:T3N1M0, alive, 2526 days
9.2
U0592
0 years, female, NA, stage:T2N0M0, dead, 670 days
9.2
U0648
0 years, female, NA, stage:T3N0M0, alive, 1415 days
9.2
U0593
0 years, male, NA, stage:T4bN0M0, alive, 876 days
9.1
U0550
0 years, male, NA, stage:T3N2M0, alive, 2191 days
9.1
U0329
0 years, male, NA, stage:T3N1M0, dead, 805 days
9.0
U0587
0 years, male, NA, stage:T3N1M0, alive, 2107 days
9.0
U0538
0 years, female, NA, stage:T3N1M0, alive, 1308 days
9.0
U0140
0 years, male, NA, stage:T3N2M0, alive, 2655 days
9.0
U0579
0 years, female, NA, stage:T4aN0M0, alive, 2845 days
8.9
U0800
0 years, male, NA, stage:T3N2M1, dead, 411 days
8.9
U0645
0 years, male, NA, stage:T3N0M0, alive, 1567 days
8.8
U0814
0 years, female, NA, stage:T3N1M1, dead, 482 days
8.8
U2991
0 years, female, NA, stage:T1N0M0, alive, 135 days
8.8
U0457
0 years, male, NA, stage:T3N0M0, alive, 833 days
8.7
U2779
0 years, male, NA, stage:T3N0M0, alive, 419 days
8.7
U0364
0 years, female, NA, stage:T4N2M1, dead, 151 days
8.7
U0577
0 years, female, NA, stage:T3N2M0, alive, 2474 days
8.7
U0434
0 years, male, NA, stage:T2N0M0, alive, 2558 days
8.6
U0212
0 years, male, NA, stage:T3N0M1, alive, 1330 days
8.5
U0497
0 years, female, NA, stage:T3N1M0, alive, 1414 days
8.4
U0508
0 years, male, NA, stage:T3N1M0, alive, 1120 days
8.4
U0242
0 years, male, NA, stage:T3N0M0, alive, 2950 days
8.4
U0502
0 years, male, NA, stage:T4N1M0, alive, 1065 days
8.4
U0409
0 years, female, NA, stage:T3N1M0, alive, 934 days
8.4
U0578
0 years, male, NA, stage:T2N2M0, alive, 1724 days
8.3
U0848
0 years, male, NA, stage:T3N1M1, dead, 1185 days
8.3
U0402
0 years, female, NA, stage:T3N1M0, dead, 2487 days
8.3
U0750
0 years, female, NA, stage:T3N2M0, dead, 1393 days
8.3
U0601
0 years, female, NA, stage:T4N1M0, alive, 1368 days
8.3
U0658
0 years, male, NA, stage:T3N2M0, alive, 1108 days
8.3
U0407
0 years, male, NA, stage:T3N1M0, dead, 2027 days
8.3
U0558
0 years, female, NA, stage:T3N2M0, alive, 2011 days
8.3
U0650
0 years, female, NA, stage:T2N2M0, alive, 1331 days
8.3
U0388
0 years, male, NA, stage:T2N1M0, alive, 2186 days
8.3
U0604
0 years, male, NA, stage:T3N1M0, alive, 1522 days
8.3
U0552
0 years, male, NA, stage:T3N2M0, alive, 1701 days
8.2
U0299
0 years, female, NA, stage:T4N2M0, alive, 43426 days
8.2
U0194
0 years, male, NA, stage:T3N1M0, alive, 680 days
8.2
U0086
0 years, female, NA, stage:T3N1M0, dead, 594 days
8.2
U0865
0 years, female, NA, stage:T3N1M1, dead, 856 days
8.1
U0422
0 years, female, NA, stage:T3N2M1, dead, 1710 days
8.1
U0128
0 years, female, NA, stage:T3N1M0, alive, 449 days
8.1
U0155
0 years, male, NA, stage:T2N0M0, dead, 1672 days
8.0
U0519
0 years, male, NA, stage:T4N2M0, dead, 519 days
8.0
U0159
0 years, female, NA, stage:T3N1M0, alive, 1517 days
8.0
U0584
0 years, male, NA, stage:T3N2M0, alive, 2705 days
8.0
U0311
0 years, female, NA, stage:T3N1M0, alive, 1176 days
8.0
U0492
0 years, male, NA, stage:T3N2M0, alive, 1114 days
8.0
U0325
0 years, male, NA, stage:T3N0M0, dead, 1947 days
7.9
U0431
0 years, female, NA, stage:T3N1M0, alive, 695 days
7.8
U0359
0 years, male, NA, stage:T3N2M0, dead, 2443 days
7.8
U0243
0 years, female, NA, stage:T3N2M0, alive, 2975 days
7.7
U0334
0 years, male, NA, stage:T3N1M0, alive, 3171 days
7.7
U0603
0 years, male, NA, stage:T2N1M0, alive, 1904 days
7.7
U0205
0 years, female, NA, stage:T3N2M0, alive, 2984 days
7.7
U0097
0 years, male, NA, stage:T3N0M1, dead, 2903 days
7.7
U0656
0 years, male, NA, stage:T3N2M0, alive, 1150 days
7.6
U0641
0 years, female, NA, stage:T3N0M0, dead, 1626 days
7.6
U0279
0 years, male, NA, stage:T2N1M0, dead, 176 days
7.5
U0485
0 years, male, NA, stage:T3N0M0, dead, 2737 days
7.5
U0454
0 years, male, NA, stage:T3N1M0, alive, 2997 days
7.5
U0793
0 years, male, NA, stage:T3N1M1, dead, 195 days
7.5
U0458
0 years, male, NA, stage:T3N2M0, alive, 1073 days
7.5
U0437
0 years, male, NA, stage:T1N1M0, alive, 849 days
7.5
U0802
0 years, male, NA, stage:T3N2M1, dead, 338 days
7.5
U0594
0 years, male, NA, stage:T3N0M0, alive, 2852 days
7.4
U0271
0 years, female, NA, stage:T3N1M0, alive, 2414 days
7.4
U0857
0 years, male, NA, stage:T4N2M1, dead, 954 days
7.3
U0605
0 years, male, NA, stage:T2N0M0, alive, 952 days
7.3
U0417
0 years, female, NA, stage:T3N2M1, dead, 893 days
7.2
U0568
0 years, male, NA, stage:T4N1M0, alive, 1287 days
7.2
U0514
0 years, female, NA, stage:T2N2M0, alive, 2799 days
7.2
U3049
0 years, male, NA, stage:T2N0M0, alive, 533 days
7.2
U0190
0 years, male, NA, stage:T3N0M0, alive, 2367 days
7.2
U0418
0 years, male, NA, stage:T4N1M0, alive, 1246 days
7.2
U0562
0 years, female, NA, stage:T3N1M0, alive, 3092 days
7.1
U0666
0 years, male, NA, stage:T3N1M0, alive, 709 days
7.0
U0671
0 years, male, NA, stage:T3N1M0, dead, 785 days
7.0
U0600
0 years, male, NA, stage:T3N1M0, alive, 1659 days
7.0
U0478
0 years, male, NA, stage:T4N2M0, alive, 2051 days
6.9
U0542
0 years, male, NA, stage:T3N2M0, dead, 1482 days
6.9
U0803
0 years, female, NA, stage:T3N1M1, dead, 495 days
6.8
U0080
0 years, female, NA, stage:T3N0M0, dead, 489 days
6.8
U0511
0 years, female, NA, stage:T3N0M0, dead, 2387 days
6.8
U0576
0 years, male, NA, stage:T3N2M0, alive, 2540 days
6.7
U0251
0 years, male, NA, stage:T2N0M0, alive, 1906 days
6.7
U0322
0 years, male, NA, stage:T4N2M0, alive, 1694 days
6.7
U0805
0 years, male, NA, stage:T3N1M1, dead, 731 days
6.6
U0366
0 years, male, NA, stage:T3NXM1, alive, 895 days
6.6
U0534
0 years, female, NA, stage:T3N2M0, alive, 1361 days
6.6
U0346
0 years, male, NA, stage:T4N2M0, alive, 1148 days
6.6
U0596
0 years, male, NA, stage:T3N0M0, alive, 2233 days
6.5
U0298
0 years, male, NA, stage:T3N1M0, alive, 513 days
6.5
U0294
0 years, male, NA, stage:T4N0M1, alive, 561 days
6.4
U0556
0 years, male, NA, stage:T3N2M0, alive, 2037 days
6.3
U0353
0 years, female, NA, stage:T1N0M0, alive, 2912 days
6.2
U0324
0 years, female, NA, stage:T4N1M0, alive, 938 days
6.1
U0088
0 years, male, NA, stage:T3N1M1, dead, 260 days
6.1
U0093
0 years, male, NA, stage:T3N2M0, dead, 1118 days
6.1
U0339
0 years, male, NA, stage:T3N2M0, alive, 2155 days
6.1
U0647
0 years, female, NA, stage:T3N0M0, alive, 1476 days
6.1
U0804
0 years, female, NA, stage:T3N2M1, dead, 380 days
6.0
U0694
0 years, male, NA, stage:T4N0M0, dead, 489 days
6.0
U0533
0 years, male, NA, stage:T3N2M0, alive, 2248 days
6.0
U0640
0 years, male, NA, stage:T2N0M0, alive, 1696 days
6.0
U0820
0 years, male, NA, stage:T3NXM1, dead, 622 days
5.7
U0470
0 years, female, NA, stage:T2N2M0, alive, 961 days
5.7
U0188
0 years, female, NA, stage:T3N1M0, alive, 2134 days
5.0
U0539
0 years, male, NA, stage:T4N2M0, alive, 2017 days
4.7
U0686
0 years, female, NA, stage:T4bN0M0, dead, 123 days
2.8
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COLON ADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
197
Samples
Sample ID
Sample type
nRPX
4cdeecb5-19fb-493c-91f5-eb0efc_D3
Tumor
0.7
6b0a3188-d8ca-4d50-a377-a8fe4c_D2
Normal
0.6
c7aeb685-31b3-445e-8177-a3e729_D3
Tumor
0.6
a313f6ef-5994-4d49-9e66-c26911_D2
Normal
0.6
f6b1079b-9d67-4c63-b3d0-d562b5_D2
Tumor
0.6
372c900a-fced-4eef-9dc4-7282ec_D2
Tumor
0.6
aa0f5b40-3290-4255-8f4d-f45d4e_D3
Tumor
0.6
cbd0e774-c741-4753-9c9e-391a7d_D2
Normal
0.5
6e0d04fc-e6a8-41ed-b6f3-45537d_D2
Normal
0.5
206f3bd9-f62c-4663-8fdb-5b731b_D2
Normal
0.5
21cab01c-e968-42cc-9651-1e53c0_D3
Tumor
0.5
cd3a9d59-bf13-48f3-ae97-bdbca4_D2
Normal
0.4
e196a0b4-2a05-43de-bb30-ceb761_D2
Tumor
0.4
2b810478-7956-4a8b-870d-184859_D2
Tumor
0.4
87408d9e-4029-4e8f-b14c-8efc04_D3
Tumor
0.4
b4dd4a04-5eda-43dd-8298-215b07_D3
Tumor
0.4
8af80ae9-2088-4124-91fb-8d6c17_D3
Tumor
0.4
7cc7f69f-99f5-4b23-a9e0-ba0dc8_D8
Tumor
0.4
0d5554d1-1653-4589-a44f-43113e_D2
Normal
0.4
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Tumor
0.4
1f79fed9-f0d4-4c45-acd2-ea1441_D2
Normal
0.4
23e938d0-92b8-4aea-90c1-4385df_D2
Normal
0.4
da747cee-5026-4923-af63-ad9f81_D2
Normal
0.3
41ee934e-f7a3-4ef5-8a83-e2ac56_D2
Tumor
0.3
0630ecb0-b664-4e75-bb3c-fb62ee_D3
Tumor
0.3
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Tumor
0.3
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Tumor
0.3
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Normal
0.3
5cf5e61d-21ff-4678-9126-14e9bb_D2
Normal
0.3
7478980a-60fb-4f5e-aa1c-2d7941_D2
Normal
0.3
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Tumor
0.3
5e886f1c-8165-4232-9591-d80799_D2
Normal
0.3
e14c2cbe-eca0-4745-97f6-8f27bd_D2
Normal
0.3
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Normal
0.3
92f7419c-c57a-4b50-bdc9-4d09ca_D2
Tumor
0.3
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Tumor
0.3
1c070992-647b-4173-a481-904c4d_D2
Normal
0.3
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Tumor
0.3
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Normal
0.3
5271982c-5de1-4d6e-b414-b1f3ef_D2
Tumor
0.2
7784e2e5-c0e1-4b85-8cc1-7faac8_D2
Normal
0.2
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Tumor
0.2
0f238226-864c-4de0-8c61-01e729_D2
Tumor
0.2
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Normal
0.2
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Tumor
0.2
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Tumor
0.2
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Normal
0.2
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Tumor
0.2
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Normal
0.2
348f6009-e1be-44d2-a093-9ca844_D2
Normal
0.2
211cbcef-cb1f-4c80-a1c8-a76d3c_D2
Normal
0.2
05a33362-82bb-48ac-8feb-ad2ea1_D2
Tumor
0.2
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Normal
0.2
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Normal
0.2
9a6879b1-4f78-4ac6-9fca-dad049_D2
Normal
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
0aef1fe8-ca61-4113-81d0-d82ee7_D2
Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
1bf00d93-240f-47e8-8055-f546b0_D2
Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
-0.1
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Tumor
-0.1
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Normal
-0.1
2f8b02e4-1848-4abc-a95e-dd9eb5_D3
Tumor
-0.1
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Tumor
-0.1
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Normal
-0.1
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Normal
-0.1
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Tumor
-0.1
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Normal
-0.1
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Normal
-0.1
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Tumor
-0.1
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Tumor
-0.1
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Tumor
-0.1
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Normal
-0.1
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Tumor
-0.1
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Tumor
-0.1
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Normal
-0.1
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Normal
-0.2
1425a1a1-c835-47a2-a9b9-4db5d0_D8
Tumor
-0.2
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Normal
-0.2
37219a7c-6fe2-4684-a494-d0be08_D2
Tumor
-0.2
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Normal
-0.2
7fd2eea8-bf99-4f97-8b9e-fb703f_D2
Normal
-0.2
da95f6f8-be46-4ed8-a493-2c99f0_D2
Normal
-0.2
46dfc1e4-0110-4d9f-888e-6a29ab_D2
Normal
-0.2
6d9f8b06-f28c-4e9b-823b-33ebb7_D2
Normal
-0.2
65867ab1-5eab-44a8-b2bb-d27263_D2
Normal
-0.2
8960a27e-69d8-4ec8-a795-c6cf8a_D3
Tumor
-0.2
5c70e654-583c-4dd3-ad42-0d9b39_D2
Normal
-0.2
47d2a435-b203-4438-ae72-53c424_D2
Normal
-0.2
66b829db-1cdd-460d-b2f3-0e9ca9_D3
Tumor
-0.2
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Tumor
-0.2
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Normal
-0.2
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Tumor
-0.2
5da00abd-5fa7-4deb-95f1-7982e0_D3
Tumor
-0.2
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Tumor
-0.2
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Normal
-0.2
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Normal
-0.2
d6584b4a-ca99-4a2a-8b4e-c8b22e_D3
Tumor
-0.3
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Tumor
-0.3
8fab37a4-cdf9-4ce8-9081-7b9148_D2
Normal
-0.3
43bc845e-d22e-4c10-b3e8-bc54e6_D2
Normal
-0.3
5a3aa99d-ca10-45f6-939f-12392a_D2
Normal
-0.3
e74089a9-f78c-4ffe-8174-aef71b_D2
Normal
-0.3
7fd386f0-e7f6-4ee1-9cd7-b3318a_D2
Normal
-0.3
16ac8458-5200-4302-9ad0-b311df_D2
Normal
-0.3
8cc7e656-0152-4359-8566-0581c3
Tumor
-0.3
4c9dcc8c-ccdc-4336-8e23-107feb_D2
Normal
-0.3
359f5c81-2575-497e-8630-e4866f_D2
Normal
-0.3
067db520-1b1f-4569-9414-e37a6e_D2
Normal
-0.3
0c330883-ab58-4a5a-bff7-07d283_D2
Normal
-0.3
2d266d2d-4bb3-436c-a3e7-06acb2_D3
Tumor
-0.3
642fc6c3-8d4a-4e3d-ad0a-cc088a_D2
Tumor
-0.4
176d1b96-8c6e-44fe-8a32-e15194_D2
Normal
-0.4
c1b66358-d103-493c-b8ec-92c43b_D1
Tumor
-0.4
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Normal
-0.4
6797a69d-2f74-44b9-8147-cd4fac_D2
Normal
-0.4
43192517-085e-450e-9481-0a6713_D3
Tumor
-0.4
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Tumor
-0.4
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Tumor
-0.4
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Normal
-0.4
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Normal
-0.4
41a04113-2061-4923-bca5-da586c_D2
Normal
-0.4
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Tumor
-0.4
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Tumor
-0.5
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Tumor
-0.5
4b263734-430f-41dc-a296-8691f0_D3
Tumor
-0.5
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Tumor
-0.5
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Normal
-0.5
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Tumor
-0.5
411d9597-c785-4de5-b449-29a80d_D2
Normal
-0.5
e8faa3a7-9fc7-428e-9334-a0afd0_D3
Tumor
-0.5
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Tumor
-0.5
cc271b3d-ed33-481f-9d23-15f2f6_D2
Normal
-0.5
2cc46aec-6142-4fb9-aca5-c442b9_D2
Normal
-0.6
974e136f-7020-4a38-b9c1-094df9_D2
Normal
-0.6
154115ac-2ec2-439d-b55e-0464ee_D2
Normal
-0.6
9a48cf57-e1f0-4ea1-9804-d563f2_D2
Normal
-0.6
5347d2ce-df0c-4d81-a3e2-22db11_D2
Normal
-0.6
df479b07-bbf6-472d-a580-c3fd0c_D2
Normal
-0.6
573048dd-2502-40e0-8e8c-c41bb8_D3
Tumor
-0.6
26acb513-3ffe-49ad-8581-9dfc97_D2
Normal
-0.7
2666323d-522f-4f0a-823c-ff8866_D2
Normal
-0.7
515040a4-bbfb-4a15-9e53-e7b6e6_D2
Normal
-0.8
79097be1-cd36-4a23-99d1-3d744f_D2
Tumor
-0.9
63c1f7ac-b1ae-4c28-95aa-ce21e5_D2
Normal
-1.0
01d1ffca-4235-4dfe-bf62-56f71d_D3
Tumor
-1.0
64ed43a2-f083-43cb-9d0d-118495_D2
Normal
-1.1
d3078fa8-0692-411f-8441-0c7c48_D8
Tumor
-1.1
820a3f08-5bb1-44b3-a133-ee167e_D2
Tumor
-1.2
bc574f73-89ba-44d7-992e-82622c_D3
Tumor
-1.8
Show allShow less
COLORECTAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
