HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:7.4 nTPM
HPA Brain:11.9 nTPM
GTEx:7.4 nTPM
FANTOM5:0.0 Scaled Tags Per Million
Pig:22.2 nTPM
Mouse:2.2 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 11.9
Sample id Sample description nTPM
Hippocampus
nTPM: 7.6
2529 Female, age 94, left hemisphere 9.3
1911 Female, age 85, right hemisphere 9.2
2621 Female, age 67, right hemisphere 7.9
2148 Female, age 91, left hemisphere 6.9
1855 Male, age 76, left hemisphere 6.7
1898 Male, age 80, left hemisphere 5.2
Dentate gyrus
nTPM: 9.6
2530 Female, age 94, left hemisphere 13.5
2528 Male, age 74, both hemispheres 10.1
1927 Female, age 91, both hemispheres 8.8
2246 Female, age 85, both hemispheres 8.7
2531 Female, age 67, both hemispheres 8.5
2010 Male, age 76, both hemispheres 8.0
Entorhinal gyrus
nTPM: 10.3
2764 Male, age 80, right hemisphere 12.7
2613 Female, age 94, left hemisphere 10.7
2686 Male, age 75, right hemisphere 10.3
2117 Female, age 91, right hemisphere 9.7
1938 Female, age 85, left hemisphere 9.2
1787 Male, age 76, left hemisphere 9.0
Hippocampus, CA1
nTPM: 8.4
2082 Female, age 91, right hemisphere 9.9
2045 Male, age 76, both hemispheres 9.7
2527 Male, age 74, both hemispheres 8.2
2749 Male, age 80, left hemisphere 7.3
1873 Female, age 85, both hemispheres 6.8
Hippocampus, CA2
nTPM: 9.3
2113 Female, age 91, right hemisphere 10.5
1892 Male, age 76, both hemispheres 10.0
1940 Female, age 85, left hemisphere 9.8
2437 Female, age 94, left hemisphere 9.3
1963 Male, age 80, left hemisphere 9.0
2249 Male, age 74, both hemispheres 7.5
Hippocampus, CA3
nTPM: 10.2
2620 Female, age 94, left hemisphere 14.4
1867 Male, age 76, both hemispheres 13.4
1891 Female, age 85, both hemispheres 12.9
2137 Male, age 80, left hemisphere 10.4
2861 Female, age 67, both hemispheres 6.3
2436 Male, age 74, both hemispheres 3.9
Parahippocampal cortex
nTPM: 8.8
2532 Female, age 72, left hemisphere 12.5
2692 Male, age 74, both hemispheres 11.6
1850 Male, age 80, both hemispheres 9.7
2693 Female, age 94, both hemispheres 9.5
2245 Female, age 91, both hemispheres 9.3
1990 Female, age 91, right hemisphere 8.5
2018 Male, age 76, both hemispheres 7.7
2622 Female, age 67, right hemisphere 7.3
1933 Female, age 85, both hemispheres 6.4
2250 Female, age 67, right hemisphere 5.8
Perirhinal gyrus
nTPM: 8.6
2521 Female, age 94, right hemisphere 13.8
2848 Male, age 76, right hemisphere 9.7
1794 Male, age 80, right hemisphere 8.6
1847 Female, age 91, left hemisphere 6.6
1841 Female, age 85, right hemisphere 4.3
Subiculum
nTPM: 11.9
1901 Male, age 80, both hemispheres 17.1
2042 Male, age 76, both hemispheres 14.2
1977 Female, age 85, both hemispheres 11.6
2438 Female, age 94, left hemisphere 10.9
2619 Male, age 74, both hemispheres 9.8
2729 Female, age 91, right hemisphere 7.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 7.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.4
Samples: 197

Max nTPM: 55.1
Min nTPM: 0.0
Std nTPM: 6.2
Median nTPM: 6.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 55.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 33.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 27.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 22.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 21.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 21.9
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 21.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 20.6
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 20.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 20.2
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 17.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 0.0
FF:10153-102I9 76 years, female 0.1
FF:10169-103B7 60 years, female 0.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 22.2
Pig sample Sample description nTPM
Subiculum
nTPM: 22.2
Samples: 4

Max nTPM: 28.9
Min nTPM: 14.6
Sample A Female 28.9
Sample B Female 25.8
Sample C Male 19.6
Sample D Male 14.6
Dorsal hippocampus
nTPM: 10.7
Samples: 4

Max nTPM: 20.9
Min nTPM: 6.6
Sample A Female 7.0
Sample B Female 8.4
Sample C Male 20.9
Sample D Male 6.6
Entorhinal cortex
nTPM: 7.9
Samples: 4

Max nTPM: 10.9
Min nTPM: 5.1
Sample A Female 6.6
Sample B Female 5.1
Sample C Male 10.9
Sample D Male 8.9
Ventral hippocampus
nTPM: 9.3
Samples: 4

Max nTPM: 16.5
Min nTPM: 5.7
Sample A Female 5.7
Sample B Female 16.5
Sample C Male 8.5
Sample D Male 6.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 2.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.4
Samples: 4

Max nTPM: 1.9
Min nTPM: 0.5
Sample A Male 1.9
Sample B Male 1.5
Sample C Female 1.6
Sample D Female 0.5
Hippocampal formation
nTPM: 2.2
Samples: 4

Max nTPM: 3.3
Min nTPM: 0.6
Sample A Male 2.0
Sample B Male 0.6
Sample C Female 3.3
Sample D Female 2.7

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