We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IGF2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
726.9
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
10662.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
9929.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
8605.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
8174.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
7566.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
7441.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
7271.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
7078.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
6413.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
6376.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
5751.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
5615.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
5569.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
5407.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
5391.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
5069.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
4978.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
4835.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
4653.4
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
4531.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
4389.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
4345.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
4316.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
4184.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
4042.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
3913.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
3813.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
3800.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
3651.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
3545.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
3528.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
3484.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
3442.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
3294.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
3145.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
3125.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
2922.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
2583.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
2521.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
2470.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
2457.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
2453.9
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
2436.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
2420.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
2371.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
2369.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
2272.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
2225.7
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
2114.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
1990.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
1916.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1877.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
1807.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
1690.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
1625.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
1578.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
1568.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
1550.3
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
1445.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1346.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
1229.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
1184.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
1177.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
1118.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
989.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
952.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
867.5
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
702.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
665.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
574.6
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
570.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
545.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
512.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
471.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
451.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
445.8
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
369.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
334.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
310.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
280.6
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
265.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
233.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
211.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
210.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
204.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
202.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
188.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
188.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
187.6
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
185.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
181.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
172.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
165.7
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
165.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
159.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
153.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
150.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
146.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
141.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
134.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
130.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
130.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
117.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
115.9
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
114.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
111.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
107.4
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
103.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
101.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
97.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
95.3
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
92.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
87.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
85.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
84.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
84.2
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
73.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
65.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
63.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
63.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
60.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
60.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
59.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
59.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
56.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
56.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
53.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
53.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
50.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
49.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
47.5
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
46.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
44.3
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
43.9
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
39.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
38.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
37.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
37.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
36.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
36.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
30.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
30.3
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
29.6
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
29.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
28.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
27.3
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
27.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
26.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
26.5
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
25.5
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
25.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
24.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
24.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
23.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
23.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
22.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
21.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
20.7
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
19.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
19.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
19.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
19.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
18.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
18.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
17.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
16.4
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
15.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
15.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
15.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
14.8
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
14.7
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
14.6
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
14.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
13.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
13.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
13.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
13.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
12.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
12.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
12.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
11.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
11.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
11.5
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
11.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
11.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
10.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
10.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
10.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
10.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
10.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
10.3
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
9.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
9.8
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
9.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
9.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
9.3
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
9.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
9.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
9.0
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
8.8
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
8.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
8.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
8.4
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
8.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
8.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
7.9
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
7.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
7.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
7.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
7.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
7.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
6.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
6.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
6.9
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
6.8
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
6.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
6.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
6.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
6.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
6.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
5.9
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
5.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
5.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
5.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
5.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
5.4
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
5.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
5.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
5.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
5.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
5.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
5.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
4.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
4.8
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
4.6
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
4.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
4.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
4.5
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
4.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
4.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
4.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
4.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
4.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
4.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
4.1
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
4.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
4.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
4.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
3.9
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
3.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
3.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
3.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
3.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
3.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
3.8
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
3.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
3.7
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
3.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
3.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
3.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
3.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
3.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
3.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
3.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
3.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
3.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
3.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
3.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
3.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
3.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.9
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
2.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
2.9
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
2.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
2.9
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
2.8
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
2.8
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
2.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
2.7
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
2.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
2.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
2.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
2.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
2.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
2.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
2.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
2.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
2.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
2.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
2.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
2.1
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
2.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
2.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
2.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
2.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
2.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
1.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
1.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
1.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
1.9
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
1.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
1.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
1.7
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
1.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
1.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
1.6
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
1.6
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
1.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
1.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
1.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
1.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
1.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
1.5
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
1.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
1.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
1.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
1.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
1.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
1.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
1.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
1.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
1.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
1.2
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
1.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
1.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
1.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
1.0
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
1.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
1.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
1.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
0.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
0.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
0.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
0.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
0.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
0.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
0.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
0.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
0.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
0.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.7
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
0.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
0.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
0.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
0.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
0.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
0.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
0.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
0.5
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
0.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
0.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
0.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
0.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
0.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
0.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
0.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
0.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IGF2 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
620.7
Number of samples
231
Samples
Sample
Description
TPM
DO45189
0 years, female, NA, stage:2, alive, 1200 days
12227.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
10717.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
6922.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
6837.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
6403.7
DO50855
0 years, male, NA, stage:2, alive, 570 days
6090.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
5770.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
5022.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
4956.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
4300.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
4216.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
4007.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
3564.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
3365.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
3218.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
3185.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
3103.5
DO45121
0 years, male, NA, stage:3, alive, 1530 days
2568.7
DO48712
0 years, male, NA, stage:2, alive, 810 days
2477.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
2451.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
2446.0
DO45243
0 years, female, NA, stage:3, alive, 930 days
2339.8
DO48697
0 years, female, NA, stage:2, dead, 810 days
2337.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
2287.1
DO45219
0 years, male, NA, stage:2, alive, 1080 days
2233.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
2042.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
2028.8
DO45137
0 years, male, NA, stage:1, alive, 1320 days
1991.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
1924.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
1851.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
1699.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
1454.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
1346.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
1274.2
DO45115
0 years, male, NA, stage:2, alive, 840 days
1243.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
1125.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
975.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
929.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
905.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
862.2
DO45107
0 years, female, NA, stage:2, alive, 1710 days
851.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
720.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
626.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
581.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
501.7
DO45135
0 years, male, NA, stage:1, alive, 1410 days
354.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
321.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
285.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
240.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
226.2
DO23531
0 years, female, NA, stage:3, alive, 900 days
209.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
192.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
175.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
175.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
167.1
DO23544
0 years, male, NA, stage:2, alive, 960 days
163.7
DO23551
0 years, male, NA, stage:3, dead, 150 days
155.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
132.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
129.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
120.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
119.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
117.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
106.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
101.6
DO45221
0 years, female, NA, stage:4, dead, 390 days
97.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
81.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
79.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
76.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
70.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
69.1
DO45251
0 years, female, NA, stage:2, alive, 900 days
65.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
63.8
DO23542
0 years, male, NA, stage:3, alive, 960 days
54.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
49.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
49.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
44.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
44.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
43.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
41.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
40.5
DO45153
0 years, female, NA, stage:2, alive, 1380 days
40.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
38.3
DO45249
0 years, male, NA, stage:1, alive, 630 days
38.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
35.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
33.9
DO45279
0 years, male, NA, stage:3, alive, 1290 days
32.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
31.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
29.7
DO50832
0 years, male, NA, stage:3, alive, 90 days
26.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
25.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
22.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
19.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
18.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
17.8
DO45139
0 years, male, NA, stage:3, alive, 1320 days
16.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
16.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
16.2
DO23527
0 years, male, NA, stage:1, alive, 1050 days
15.6
DO45285
0 years, male, NA, stage:3, alive, 480 days
14.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
14.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
14.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
13.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
13.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
11.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
11.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
10.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
10.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
10.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
9.7
DO45094
0 years, male, NA, stage:3, alive, 1650 days
8.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
7.7
DO45127
0 years, male, NA, stage:3, dead, 420 days
7.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
7.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
7.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
7.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
7.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
7.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
7.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
6.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
6.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
6.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
6.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
6.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
6.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
5.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
5.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
5.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
5.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
4.9
DO45119
0 years, male, NA, stage:3, dead, 510 days
4.9
DO45157
0 years, male, NA, stage:2, alive, 1980 days
4.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
4.5
DO48737
0 years, male, NA, stage:1, alive, 720 days
4.5
DO50811
0 years, male, NA, stage:1, alive, 450 days
4.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
4.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
4.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
4.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
4.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
4.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
4.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
4.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
4.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
4.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
3.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
3.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
3.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
3.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
3.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
3.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
3.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
3.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
3.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
3.3
DO23529
0 years, male, NA, stage:4, alive, 930 days
3.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
3.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
3.1
DO48747
0 years, male, NA, stage:3, alive, 540 days
2.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
2.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
2.7
DO50798
0 years, male, NA, stage:3, dead, 30 days
2.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
2.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
2.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
2.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
2.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
2.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
2.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
2.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
2.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
2.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
2.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
2.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
2.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
1.9
DO50814
0 years, male, NA, stage:3, alive, 420 days
1.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
1.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
1.8
DO45299
0 years, female, NA, stage:1, alive, 1440 days
1.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
1.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
1.8
DO23543
0 years, male, NA, stage:2, alive, 1020 days
1.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
1.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
1.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
1.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
1.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
1.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
1.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
1.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
1.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
1.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
1.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
1.3
DO50776
0 years, male, NA, stage:1, alive, 690 days
1.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
1.3
DO48719
0 years, male, NA, stage:2, alive, 690 days
1.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
1.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
1.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
1.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
1.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
1.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
1.0
DO45145
0 years, male, NA, stage:3, dead, 60 days
1.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
1.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
0.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
0.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
0.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
0.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
0.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
0.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
0.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
0.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
0.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
0.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
0.6
DO45193
0 years, female, NA, stage:4, dead, 120 days
0.6
DO50818
0 years, male, NA, stage:2, alive, 510 days
0.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
0.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
0.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
0.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
0.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
0.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
0.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
0.4
DO45093
0 years, male, NA, stage:2, dead, 720 days
0.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
0.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
0.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
0.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
0.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
0.3
DO48751
0 years, male, NA, stage:2, dead, 480 days
0.3
DO23521
0 years, male, NA, stage:3, alive, 1110 days
0.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
0.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
965
Tumor
3.3
737
Tumor
2.0
813
Tumor
2.0
921
Tumor
1.9
1043
Tumor
1.8
463
Tumor
1.7
131
Tumor
1.7
727
Tumor
1.7
297
Tumor
1.6
975
Tumor
1.5
455
Tumor
1.4
1025
Tumor
1.4
983
Tumor
1.4
672
Normal
1.3
331
Tumor
1.3
568
Normal
1.2
713
Tumor
1.2
363
Tumor
1.2
814
Normal
1.2
817
Tumor
1.1
285
Tumor
1.0
951
Tumor
1.0
271
Tumor
1.0
695
Tumor
1.0
572
Normal
0.9
815
Tumor
0.9
351
Tumor
0.9
545
Tumor
0.9
447
Tumor
0.8
484
Normal
0.8
743
Tumor
0.8
471
Tumor
0.8
1045
Tumor
0.8
671
Tumor
0.8
914
Normal
0.7
574
Normal
0.7
111
Normal
0.7
446
Normal
0.6
746
Normal
0.6
648
Normal
0.6
368
Normal
0.6
786
Normal
0.6
564
Normal
0.6
196
Normal
0.5
376
Normal
0.5
436
Normal
0.5
352
Normal
0.5
128
Normal
0.5
344
Normal
0.5
366
Normal
0.5
878
Normal
0.5
546
Normal
0.5
362
Normal
0.5
218
Normal
0.4
186
Normal
0.4
277
Tumor
0.4
222
Normal
0.4
384
Normal
0.4
554
Normal
0.4
286
Normal
0.4
862
Normal
0.4
723
Tumor
0.4
342
Normal
0.4
192
Normal
0.4
518
Normal
0.4
343
Tumor
0.4
742
Normal
0.4
1016
Normal
0.4
618
Normal
0.4
642
Normal
0.4
864
Normal
0.4
452
Normal
0.3
778
Normal
0.3
148
Normal
0.3
426
Normal
0.3
132
Normal
0.3
666
Normal
0.3
553
Tumor
0.3
126
Normal
0.3
756
Normal
0.3
744
Normal
0.3
984
Normal
0.3
881
Tumor
0.3
558
Normal
0.3
136
Normal
0.3
124
Normal
0.3
494
Normal
0.3
616
Normal
0.3
162
Normal
0.2
172
Normal
0.2
636
Normal
0.2
628
Normal
0.2
662
Normal
0.2
434
Normal
0.2
188
Normal
0.2
312
Normal
0.2
664
Normal
0.2
516
Normal
0.2
278
Normal
0.2
147
Tumor
0.2
258
Normal
0.1
114
Normal
0.1
728
Normal
0.1
641
Tumor
0.1
982
Normal
0.1
967
Tumor
0.1
284
Normal
0.1
214
Normal
0.1
617
Tumor
0.1
868
Normal
0.1
714
Normal
0.1
738
Normal
0.1
358
Normal
0.1
383
Tumor
0.1
882
Normal
0.1
528
Normal
0.1
212
Normal
0.1
517
Tumor
0.1
332
Normal
0.1
223
Tumor
0.1
966
Normal
0.1
314
Normal
0.0
462
Normal
0.0
464
Normal
0.0
354
Normal
0.0
884
Normal
0.0
488
Normal
0.0
232
Normal
0.0
474
Normal
0.0
146
Normal
0.0
142
Normal
0.0
716
Normal
0.0
877
Tumor
0.0
523
Tumor
0.0
356
Normal
0.0
412
Normal
0.0
298
Normal
0.0
365
Tumor
0.0
138
Normal
0.0
268
Normal
0.0
866
Normal
0.0
923
Tumor
0.0
432
Normal
0.0
272
Normal
0.0
952
Normal
0.0
745
Tumor
0.0
361
Tumor
-0.1
526
Normal
-0.1
912
Normal
-0.1
515
Tumor
-0.1
627
Tumor
-0.1
538
Normal
-0.1
421
Tumor
-0.1
514
Normal
-0.1
722
Normal
-0.1
534
Normal
-0.1
228
Normal
-0.1
364
Normal
-0.1
444
Normal
-0.1
262
Normal
-0.1
424
Normal
-0.1
696
Normal
-0.1
414
Normal
-0.1
367
Tumor
-0.2
456
Normal
-0.2
1031
Tumor
-0.2
1044
Normal
-0.2
224
Normal
-0.2
422
Normal
-0.2
1021
Tumor
-0.2
818
Normal
-0.2
977
Tumor
-0.2
924
Normal
-0.2
468
Normal
-0.2
1014
Normal
-0.2
472
Normal
-0.2
816
Normal
-0.2
918
Normal
-0.2
536
Normal
-0.2
686
Normal
-0.2
498
Normal
-0.2
852
Normal
-0.2
1022
Normal
-0.3
858
Normal
-0.3
355
Tumor
-0.3
428
Normal
-0.3
411
Tumor
-0.3
978
Normal
-0.3
416
Normal
-0.3
481
Tumor
-0.3
958
Normal
-0.3
943
Tumor
-0.3
482
Normal
-0.3
375
Tumor
-0.3
915
Tumor
-0.3
227
Tumor
-0.3
466
Normal
-0.4
328
Normal
-0.4
824
Normal
-0.4
1026
Normal
-0.4
267
Tumor
-0.4
217
Tumor
-0.4
524
Normal
-0.4
964
Normal
-0.4
976
Normal
-0.4
221
Tumor
-0.4
698
Normal
-0.4
473
Tumor
-0.4
968
Normal
-0.5
922
Normal
-0.5
823
Tumor
-0.5
1028
Normal
-0.5
874
Normal
-0.5
785
Tumor
-0.6
261
Tumor
-0.6
492
Normal
-0.6
231
Tumor
-0.6
448
Normal
-0.6
327
Tumor
-0.6
1046
Normal
-0.6
145
Tumor
-0.6
615
Tumor
-0.6
777
Tumor
-0.7
926
Normal
-0.7
755
Tumor
-0.7
478
Normal
-0.7
185
Tumor
-0.7
461
Tumor
-0.7
981
Tumor
-0.7
435
Tumor
-0.7
867
Tumor
-0.7
341
Tumor
-0.7
161
Tumor
-0.7
141
Tumor
-0.7
465
Tumor
-0.8
1032
Normal
-0.8
415
Tumor
-0.8
956
Normal
-0.8
527
Tumor
-0.8
257
Tumor
-0.8
955
Tumor
-0.8
137
Tumor
-0.8
916
Normal
-0.8
1042
Normal
-0.8
721
Tumor
-0.8
537
Tumor
-0.9
938
Normal
-0.9
171
Tumor
-0.9
311
Tumor
-0.9
187
Tumor
-0.9
963
Tumor
-0.9
113
Tumor
-0.9
661
Tumor
-0.9
353
Tumor
-1.0
533
Tumor
-1.0
944
Normal
-1.0
283
Tumor
-1.0
857
Tumor
-1.0
873
Tumor
-1.0
451
Tumor
-1.0
925
Tumor
-1.1
635
Tumor
-1.1
724
Normal
-1.1
911
Tumor
-1.1
571
Tumor
-1.1
954
Normal
-1.1
467
Tumor
-1.1
513
Tumor
-1.1
195
Tumor
-1.1
563
Tumor
-1.2
211
Tumor
-1.2
697
Tumor
-1.2
477
Tumor
-1.2
1015
Tumor
-1.2
861
Tumor
-1.2
491
Tumor
-1.2
917
Tumor
-1.3
557
Tumor
-1.3
443
Tumor
-1.3
313
Tumor
-1.4
433
Tumor
-1.4
741
Tumor
-1.4
445
Tumor
-1.5
665
Tumor
-1.5
1013
Tumor
-1.5
112
Tumor
-1.5
135
Tumor
-1.5
957
Tumor
-1.5
357
Tumor
-1.5
851
Tumor
-1.5
413
Tumor
-1.5
937
Tumor
-1.5
525
Tumor
-1.5
1027
Tumor
-1.5
431
Tumor
-1.7
663
Tumor
-1.7
425
Tumor
-1.7
685
Tumor
-1.7
423
Tumor
-1.7
427
Tumor
-1.7
953
Tumor
-1.7
125
Tumor
-1.7
567
Tumor
-1.8
573
Tumor
-1.8
913
Tumor
-1.8
127
Tumor
-1.8
213
Tumor
-1.9
647
Tumor
-1.9
123
Tumor
-1.9
535
Tumor
-1.9
483
Tumor
-1.9
863
Tumor
-2.0
715
Tumor
-2.1
191
Tumor
-2.1
1041
Tumor
-2.2
487
Tumor
-2.5
497
Tumor
-2.6
493
Tumor
-2.6
883
Tumor
-2.6
865
Tumor
-2.9
385
Tumor
N/A
386
Normal
N/A
387
Tumor
N/A
388
Normal
N/A
391
Tumor
N/A
392
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.