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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UGT1A6 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
167.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
132.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
131.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
73.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
28.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
20.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
16.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
15.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
11.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
11.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
11.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
10.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
9.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
9.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
7.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
6.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
6.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
4.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
4.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
3.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
2.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
2.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
2.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
2.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
1.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
1.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
1.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
1.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
1.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
0.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UGT1A6 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
81.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
1119.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
932.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
853.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
674.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
600.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
590.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
529.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
490.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
472.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
446.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
399.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
395.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
383.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
355.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
345.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
336.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
334.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
331.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
331.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
328.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
328.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
324.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
307.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
296.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
295.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
289.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
285.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
276.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
271.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
257.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
252.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
251.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
244.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
243.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
243.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
237.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
235.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
232.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
225.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
224.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
221.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
218.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
209.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
202.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
202.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
201.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
201.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
201.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
200.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
199.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
199.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
198.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
194.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
193.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
189.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
186.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
186.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
185.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
185.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
184.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
183.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
181.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
180.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
179.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
178.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
178.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
173.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
171.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
169.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
168.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
167.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
167.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
161.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
161.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
160.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
160.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
159.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
157.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
156.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
154.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
147.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
145.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
144.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
142.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
141.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
139.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
138.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
136.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
135.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
134.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
134.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
133.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
132.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
131.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
131.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
131.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
130.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
128.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
128.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
127.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
126.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
126.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
125.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
125.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
125.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
124.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
122.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
121.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
120.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
120.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
118.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
117.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
116.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
113.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
113.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
112.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
109.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
109.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
108.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
108.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
107.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
107.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
106.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
104.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
101.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
100.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
99.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
99.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
98.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
96.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
96.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
95.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
94.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
93.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
92.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
92.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
92.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
88.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
88.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
86.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
86.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
85.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
85.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
84.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
84.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
84.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
83.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
82.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
82.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
82.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
82.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
82.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
81.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
81.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
81.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
81.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
80.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
80.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
79.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
79.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
78.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
78.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
78.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
77.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
76.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
76.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
75.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
74.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
74.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
74.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
73.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
73.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
72.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
72.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
72.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
71.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
71.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
71.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
71.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
70.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
70.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
70.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
69.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
68.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
67.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
67.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
66.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
66.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
65.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
65.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
65.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
64.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
64.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
64.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
64.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
62.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
62.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
62.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
61.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
61.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
60.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
60.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
60.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
59.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
58.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
58.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
58.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
58.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
58.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
58.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
57.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
57.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
57.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
56.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
54.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
54.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
54.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
53.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
53.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
52.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
52.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
52.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
52.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
51.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
51.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
51.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
51.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
51.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
51.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
51.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
51.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
50.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
50.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
50.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
49.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
49.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
49.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
48.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
48.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
48.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
48.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
48.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
48.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
47.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
47.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
47.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
47.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
47.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
46.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
46.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
46.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
45.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
45.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
45.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
45.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
45.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
45.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
44.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
44.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
43.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
43.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
43.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
43.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
42.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
41.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
41.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
41.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
41.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
41.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
40.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
40.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
40.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
40.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
39.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
39.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
39.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
39.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
39.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
39.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
39.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
39.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
38.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
38.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
38.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
38.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
38.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
37.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
37.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
36.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
36.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
36.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
36.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
36.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
35.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
35.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
35.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
35.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
35.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
34.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
34.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
34.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
34.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
33.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
33.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
33.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
33.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
33.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
33.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
33.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
32.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
32.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
32.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
32.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
31.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
31.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
30.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
30.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
30.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
30.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
29.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
29.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
29.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
28.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
28.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
28.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
28.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
28.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
28.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
28.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
27.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
27.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
27.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
27.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
27.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
27.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
26.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
26.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
26.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
26.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
26.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
26.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
26.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
26.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
26.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
26.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
25.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
25.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
25.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
25.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
24.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
24.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
24.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
23.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
23.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
23.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
23.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
22.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
22.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
22.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
22.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
22.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
22.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
22.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
22.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
22.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
21.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
21.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
21.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
21.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
21.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
21.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
21.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
21.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
21.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
20.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
20.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
20.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
20.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
20.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
20.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
20.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
20.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
19.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
19.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
19.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
19.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
19.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
19.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
19.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
19.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
18.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
18.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
18.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
18.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
18.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
18.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
18.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
18.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
17.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
16.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
16.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
16.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
16.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
15.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
15.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
15.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
15.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
15.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
15.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
15.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
15.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
15.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
14.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
14.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
14.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
14.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
13.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
13.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
13.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
13.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
13.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
13.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
12.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
12.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
12.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
12.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
12.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
11.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
11.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
11.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
10.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
10.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
10.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
10.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
10.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
9.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
9.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
9.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
9.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
9.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
9.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
9.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
9.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
9.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
9.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
8.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
8.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
8.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
8.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
8.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
8.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
8.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
7.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
7.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
7.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
7.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
6.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
6.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
6.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
6.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
6.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
6.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
6.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
5.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
5.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
5.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
5.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
5.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
4.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
4.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
4.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
4.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
4.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
4.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
3.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
3.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
3.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
3.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
3.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
3.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
3.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
3.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
2.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
2.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
2.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
2.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
2.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
2.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
2.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
2.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
1.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
1.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
1.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
1.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
1.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
1.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
1.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
1.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
1.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
0.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
0.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
0.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
0.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
0.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
0.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
0.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
0.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
0.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UGT1A6 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
88.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
562.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
442.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
411.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
397.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
367.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
284.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
240.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
214.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
208.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
201.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
195.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
190.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
163.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
159.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
156.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
154.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
141.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
139.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
132.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
129.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
125.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
124.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
121.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
116.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
114.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
108.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
108.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
107.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
106.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
102.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
99.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
97.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
94.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
91.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
89.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
88.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
87.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
84.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
83.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
82.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
77.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
73.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
70.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
70.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
70.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
69.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
68.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
66.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
63.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
63.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
60.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
60.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
56.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
54.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
53.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
51.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
43.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
42.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
39.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
39.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
36.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
34.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
32.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
32.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
30.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
28.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
28.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
28.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
26.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
26.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
24.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
23.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
23.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
21.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
20.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
19.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
17.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
16.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
15.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
15.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
14.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
14.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
14.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
14.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
14.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
12.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
9.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
9.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
8.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
8.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
8.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
7.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
6.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
3.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
3.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
2.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UGT1A6 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
102.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
1348.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
1256.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
1173.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
722.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
712.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
681.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
615.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
543.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
523.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
511.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
507.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
498.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
491.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
486.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
444.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
442.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
429.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
415.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
370.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
340.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
338.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
335.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
320.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
317.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
315.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
314.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
298.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
298.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
287.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
279.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
268.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
262.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
260.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
260.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
257.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
250.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
245.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
244.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
242.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
233.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
226.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
225.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
219.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
209.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
208.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
206.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
204.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
204.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
201.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
198.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
191.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
188.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
188.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
185.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
173.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
172.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
168.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
164.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
164.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
160.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
154.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
153.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
144.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
144.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
143.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
142.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
141.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
139.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
137.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
135.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
134.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
131.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
125.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
124.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
123.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
121.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
113.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
112.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
110.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
109.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
106.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
103.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
100.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
95.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
95.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
94.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
86.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
84.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
81.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
80.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
79.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
75.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
74.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
69.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
68.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
68.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
67.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
64.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
63.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
62.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
61.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
61.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
59.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
57.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
56.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
55.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
55.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
54.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
54.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
53.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
52.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
51.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
49.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
49.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
48.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
46.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
46.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
46.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
45.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
45.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
44.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
43.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
43.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
42.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
41.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
41.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
40.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
39.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
37.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
37.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
36.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
35.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
35.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
34.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
33.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
33.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
31.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
31.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
31.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
27.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
27.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
26.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
26.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
26.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
26.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
25.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
25.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
25.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
24.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
23.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
21.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
21.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
21.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
20.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
20.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
18.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
18.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
18.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
18.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
17.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
16.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
15.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
15.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
15.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
14.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
13.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
13.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
13.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
12.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
12.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
12.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
12.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
11.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
10.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
9.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
9.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
9.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
9.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
9.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
9.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
8.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
7.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
7.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
7.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
6.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
6.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
6.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
6.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
5.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
5.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
5.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
4.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
4.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
4.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
4.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
4.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
4.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
4.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
4.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
4.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
4.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
4.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
4.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
4.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
3.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
3.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
3.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
3.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
3.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
3.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
3.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
3.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
3.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
3.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
3.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
3.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
2.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
2.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
2.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
2.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
2.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
2.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
2.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
2.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
1.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
1.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
1.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
1.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
1.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
1.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
1.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
1.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
1.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
1.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
1.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
1.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
1.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
1.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
1.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
1.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
1.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
1.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
1.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
1.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
0.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
0.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
0.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
0.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
0.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
0.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
0.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
0.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
0.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
0.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
0.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
0.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
0.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
0.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
0.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
0.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
0.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079270003
Tumor
2.5
CPT0025110003
Tumor
2.4
CPT0002270011
Tumor
2.0
CPT0001340003
Tumor
1.6
CPT0015810003
Tumor
1.3
CPT0002350011
Tumor
0.9
CPT0019130003
Tumor
0.8
CPT0088690003
Tumor
0.7
CPT0086030003
Tumor
0.6
CPT0006730001
Normal
0.6
CPT0079480003
Tumor
0.6
CPT0092800003
Normal
0.6
CPT0024670003
Tumor
0.6
CPT0009000003
Tumor
0.6
CPT0020120003
Tumor
0.5
CPT0012180003
Tumor
0.5
CPT0075130003
Tumor
0.5
CPT0014130001
Normal
0.5
CPT0065450001
Normal
0.5
CPT0010170001
Normal
0.5
CPT0025060001
Normal
0.4
CPT0026420001
Normal
0.4
CPT0082010001
Normal
0.4
CPT0092740003
Normal
0.4
CPT0089480003
Normal
0.4
CPT0001350001
Normal
0.4
CPT0023360001
Normal
0.4
CPT0012280003
Tumor
0.4
CPT0066430001
Normal
0.3
CPT0007860003
Tumor
0.3
CPT0088920001
Normal
0.3
CPT0092310003
Normal
0.3
CPT0015730003
Tumor
0.3
CPT0063640001
Normal
0.3
CPT0086970003
Normal
0.3
CPT0001190001
Normal
0.3
CPT0064370003
Tumor
0.3
CPT0075570001
Normal
0.3
CPT0088500001
Normal
0.2
CPT0066520001
Normal
0.2
CPT0012290003
Normal
0.2
CPT0000890001
Normal
0.2
CPT0078510003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0001500009
Tumor
0.2
CPT0014160003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0065820001
Normal
0.2
CPT0013790003
Normal
0.2
CPT0000790001
Normal
0.1
CPT0086890003
Normal
0.1
CPT0088780001
Normal
0.1
CPT0088710001
Normal
0.1
CPT0078840001
Normal
0.1
CPT0086370003
Normal
0.1
CPT0065930003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0000660001
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0081880003
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0014350001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0077140001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0088900003
Tumor
-0.1
CPT0007870001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0006630003
Tumor
-0.1
CPT0065690003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0025230003
Tumor
-0.1
CPT0023350003
Tumor
-0.1
CPT0006530001
Normal
-0.1
CPT0063320003
Tumor
-0.2
CPT0088570001
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0066470004
Tumor
-0.2
CPT0079000001
Normal
-0.2
CPT0001270001
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0078530001
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0081990003
Tumor
-0.2
CPT0088630003
Tumor
-0.2
CPT0069010001
Normal
-0.2
CPT0078800003
Tumor
-0.2
CPT0020020001
Normal
-0.2
CPT0012770003
Normal
-0.2
CPT0012080003
Tumor
-0.3
CPT0075560003
Tumor
-0.3
CPT0065750003
Tumor
-0.3
CPT0088640003
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0000780007
Tumor
-0.3
CPT0020130001
Normal
-0.3
CPT0077490003
Tumor
-0.3
CPT0001510001
Normal
-0.3
CPT0002370001
Normal
-0.4
CPT0075720003
Tumor
-0.4
CPT0012550003
Tumor
-0.4
CPT0017450001
Normal
-0.4
CPT0006440003
Tumor
-0.4
CPT0012090003
Normal
-0.4
CPT0069160003
Tumor
-0.4
CPT0014450004
Tumor
-0.4
CPT0077110003
Tumor
-0.4
CPT0025350003
Tumor
-0.4
CPT0014370004
Tumor
-0.4
CPT0089460004
Tumor
-0.5
CPT0010110003
Tumor
-0.5
CPT0026410003
Tumor
-0.5
CPT0025880003
Tumor
-0.5
CPT0069190001
Normal
-0.5
CPT0065430003
Tumor
-0.5
CPT0025610001
Normal
-0.5
CPT0075170001
Normal
-0.5
CPT0079380003
Tumor
-0.6
CPT0025920001
Normal
-0.6
CPT0010160003
Tumor
-0.6
CPT0092790003
Tumor
-0.6
CPT0012900004
Tumor
-0.6
CPT0079410003
Tumor
-0.6
CPT0087040003
Tumor
-0.6
CPT0077310003
Tumor
-0.6
CPT0092190003
Normal
-0.6
CPT0019160001
Normal
-0.6
CPT0001260009
Tumor
-0.6
CPT0007320003
Tumor
-0.6
CPT0077320001
Normal
-0.6
CPT0019990003
Tumor
-0.6
CPT0086870003
Tumor
-0.6
CPT0001230001
Normal
-0.6
CPT0084590001
Normal
-0.7
CPT0012670003
Tumor
-0.7
CPT0014470001
Normal
-0.7
CPT0063630003
Tumor
-0.7
CPT0088760003
Tumor
-0.7
CPT0018250001
Normal
-0.7
CPT0025580004
Tumor
-0.8
CPT0024680001
Normal
-0.8
CPT0086950003
Tumor
-0.8
CPT0086360003
Tumor
-0.8
CPT0006900003
Tumor
-0.8
CPT0065870003
Tumor
-0.8
CPT0089020003
Tumor
-0.9
CPT0081600003
Tumor
-0.9
CPT0069000003
Tumor
-0.9
CPT0071150004
Tumor
-0.9
CPT0092160003
Tumor
-1.0
CPT0009080003
Normal
-1.0
CPT0011410003
Tumor
-1.0
CPT0000870016
Tumor
-1.0
CPT0001550001
Normal
-1.0
CPT0066480003
Tumor
-1.0
CPT0001220008
Tumor
-1.0
CPT0012370003
Tumor
-1.1
CPT0012640003
Normal
-1.1
CPT0015910003
Tumor
-1.2
CPT0001540009
Tumor
-1.2
CPT0001180009
Tumor
-1.2
CPT0079230003
Tumor
-1.2
CPT0009020003
Normal
-1.2
CPT0000640003
Tumor
-1.2
CPT0079300001
Normal
-1.2
CPT0085670003
Tumor
-1.2
CPT0012920003
Normal
-1.2
CPT0009060003
Tumor
-1.3
CPT0092730003
Tumor
-1.3
CPT0025050003
Tumor
-1.3
CPT0078990003
Tumor
-1.4
CPT0076330003
Tumor
-1.4
CPT0079510001
Normal
-1.5
CPT0017850003
Tumor
-1.6
CPT0011240003
Tumor
-1.7
CPT0088550004
Tumor
-1.7
CPT0086820003
Tumor
-1.8
CPT0078660003
Tumor
-1.8
CPT0088970003
Tumor
-1.8
CPT0079180003
Tumor
-1.8
CPT0084560003
Tumor
-1.9
CPT0017410003
Tumor
-2.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
