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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNRPD1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
114.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
72.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
60.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
59.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
57.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
57.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
57.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
49.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
46.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
44.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
40.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
40.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
40.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
39.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
38.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
38.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
38.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
37.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
36.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
36.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
36.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
35.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
33.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
33.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
33.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
32.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
32.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
31.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
31.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
30.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
30.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
30.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
29.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
29.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
28.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
27.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
27.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
25.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
25.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
25.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
24.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
24.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
23.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
23.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
22.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
22.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
20.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
20.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
19.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
19.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
18.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
18.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
17.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
15.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
15.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
13.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
11.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
10.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
10.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
9.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
7.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
5.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
3.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNRPD1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
46.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
154.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
138.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
113.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
108.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
106.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
97.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
95.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
93.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
89.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
88.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
87.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
83.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
80.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
80.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
79.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
76.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
76.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
76.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
76.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
75.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
75.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
74.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
74.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
74.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
74.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
73.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
73.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
72.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
72.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
72.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
72.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
71.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
70.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
70.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
70.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
69.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
69.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
68.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
68.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
67.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
67.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
67.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
67.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
67.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
67.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
66.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
66.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
66.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
66.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
66.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
65.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
65.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
64.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
63.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
63.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
63.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
62.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
62.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
62.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
62.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
62.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
62.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
62.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
62.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
62.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
61.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
61.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
61.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
61.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
61.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
60.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
60.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
60.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
60.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
60.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
60.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
60.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
60.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
60.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
59.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
59.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
59.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
59.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
59.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
59.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
59.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
59.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
59.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
59.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
59.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
59.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
59.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
58.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
58.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
58.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
58.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
58.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
58.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
58.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
58.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
58.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
57.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
57.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
57.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
57.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
57.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
57.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
57.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
57.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
57.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
57.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
57.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
57.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
57.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
57.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
57.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
57.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
56.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
56.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
56.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
56.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
56.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
56.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
56.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
56.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
56.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
56.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
56.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
56.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
55.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
55.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
55.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
55.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
55.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
55.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
55.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
55.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
54.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
54.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
54.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
54.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
54.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
54.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
53.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
53.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
53.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
53.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
53.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
53.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
53.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
53.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
53.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
53.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
53.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
53.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
53.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
52.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
52.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
52.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
52.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
52.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
52.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
52.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
52.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
52.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
52.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
52.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
52.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
52.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
52.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
52.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
52.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
51.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
51.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
51.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
51.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
51.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
51.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
51.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
51.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
51.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
50.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
50.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
50.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
50.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
50.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
50.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
50.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
50.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
50.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
50.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
50.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
50.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
49.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
49.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
49.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
49.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
49.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
49.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
49.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
49.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
49.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
49.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
49.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
49.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
49.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
49.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
48.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
48.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
48.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
48.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
48.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
48.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
48.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
48.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
48.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
48.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
48.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
48.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
48.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
48.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
48.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
48.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
48.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
47.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
47.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
47.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
47.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
47.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
47.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
47.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
47.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
47.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
47.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
47.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
47.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
47.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
47.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
47.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
47.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
47.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
47.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
47.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
46.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
46.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
46.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
46.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
46.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
46.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
46.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
46.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
46.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
46.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
46.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
46.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
46.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
46.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
46.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
46.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
45.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
45.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
45.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
45.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
45.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
45.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
45.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
45.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
45.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
45.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
45.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
45.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
45.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
45.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
45.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
45.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
44.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
44.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
44.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
44.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
44.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
44.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
44.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
44.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
44.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
44.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
44.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
44.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
44.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
43.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
43.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
43.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
43.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
43.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
43.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
43.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
43.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
43.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
43.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
43.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
43.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
43.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
43.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
43.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
43.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
42.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
42.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
42.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
42.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
42.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
42.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
42.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
42.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
42.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
42.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
42.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
42.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
42.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
41.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
41.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
41.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
41.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
41.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
41.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
41.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
41.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
41.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
41.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
41.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
40.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
40.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
40.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
40.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
40.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
40.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
40.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
40.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
40.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
40.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
40.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
40.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
40.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
40.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
40.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
40.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
40.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
40.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
40.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
40.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
39.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
39.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
39.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
39.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
39.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
39.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
39.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
39.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
38.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
38.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
38.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
38.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
38.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
38.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
38.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
37.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
37.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
37.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
37.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
37.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
37.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
36.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
36.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
36.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
36.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
36.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
36.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
36.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
36.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
36.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
36.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
36.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
36.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
35.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
35.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
35.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
35.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
35.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
35.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
35.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
35.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
35.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
35.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
35.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
35.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
35.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
35.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
35.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
35.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
35.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
35.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
34.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
34.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
34.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
34.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
34.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
34.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
33.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
33.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
33.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
33.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
33.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
33.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
33.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
33.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
33.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
33.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
33.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
33.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
33.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
33.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
33.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
33.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
33.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
33.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
33.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
33.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
32.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
32.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
32.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
32.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
32.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
32.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
32.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
32.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
32.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
32.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
32.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
32.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
32.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
32.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
31.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
31.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
31.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
31.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
31.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
31.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
31.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
31.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
31.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
31.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
30.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
30.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
30.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
30.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
30.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
30.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
30.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
30.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
30.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
30.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
30.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
29.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
29.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
29.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
29.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
29.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
29.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
29.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
29.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
29.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
28.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
28.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
28.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
28.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
28.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
28.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
27.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
27.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
27.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
27.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
26.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
26.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
26.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
26.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
26.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
26.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
25.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
25.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
25.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
25.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
25.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
25.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
24.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
24.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
24.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
23.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
23.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
23.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
23.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
23.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
22.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
22.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
20.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
20.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
20.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
20.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
20.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
20.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
19.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
19.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
19.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
19.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
17.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
17.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
17.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
16.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
16.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
16.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
15.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
15.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
15.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNRPD1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
44.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
200.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
96.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
78.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
76.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
72.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
69.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
62.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
62.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
61.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
61.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
61.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
60.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
60.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
60.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
55.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
55.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
55.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
55.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
54.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
53.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
53.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
51.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
51.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
51.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
51.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
51.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
50.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
49.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
49.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
49.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
49.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
48.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
48.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
47.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
47.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
47.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
47.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
45.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
44.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
44.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
44.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
44.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
44.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
44.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
43.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
43.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
42.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
42.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
41.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
41.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
41.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
41.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
40.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
40.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
40.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
40.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
40.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
39.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
39.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
38.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
38.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
38.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
38.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
38.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
38.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
38.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
38.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
37.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
37.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
36.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
36.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
35.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
35.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
35.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
34.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
34.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
33.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
33.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
32.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
32.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
32.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
30.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
30.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
30.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
29.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
29.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
29.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
28.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
27.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
26.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
26.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
25.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
23.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
23.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
21.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
21.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
19.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
19.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
14.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNRPD1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
37.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
143.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
114.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
100.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
86.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
84.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
83.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
82.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
82.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
79.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
76.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
75.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
75.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
74.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
74.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
73.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
71.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
71.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
69.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
68.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
65.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
65.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
63.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
62.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
62.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
61.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
61.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
61.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
60.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
60.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
60.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
60.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
60.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
59.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
59.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
59.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
58.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
58.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
58.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
58.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
56.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
55.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
55.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
55.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
54.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
54.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
53.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
53.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
53.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
53.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
53.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
53.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
53.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
53.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
52.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
52.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
52.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
51.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
51.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
51.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
51.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
51.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
50.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
50.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
50.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
50.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
49.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
49.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
49.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
49.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
48.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
48.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
48.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
48.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
47.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
47.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
47.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
46.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
46.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
45.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
45.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
45.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
45.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
45.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
44.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
44.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
44.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
44.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
44.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
44.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
43.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
43.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
43.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
43.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
43.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
42.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
42.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
42.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
42.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
42.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
42.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
42.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
41.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
41.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
41.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
41.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
41.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
41.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
41.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
41.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
40.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
40.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
40.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
40.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
39.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
39.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
39.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
39.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
38.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
38.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
38.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
38.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
38.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
38.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
38.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
37.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
37.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
37.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
37.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
37.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
37.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
37.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
37.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
37.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
36.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
36.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
36.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
36.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
36.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
36.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
36.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
36.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
35.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
35.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
34.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
34.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
34.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
34.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
34.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
34.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
34.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
34.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
34.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
33.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
33.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
33.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
33.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
33.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
32.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
32.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
32.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
32.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
32.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
32.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
32.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
32.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
32.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
32.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
32.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
31.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
31.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
31.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
31.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
31.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
31.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
31.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
30.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
30.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
30.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
30.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
30.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
30.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
30.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
30.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
30.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
29.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
29.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
29.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
29.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
28.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
28.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
28.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
28.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
28.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
28.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
27.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
27.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
27.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
27.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
27.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
27.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
26.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
26.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
26.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
25.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
25.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
25.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
25.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
25.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
25.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
24.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
24.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
24.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
24.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
24.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
24.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
24.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
24.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
23.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
23.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
23.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
23.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
23.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
23.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
23.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
22.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
22.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
21.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
20.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
20.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
20.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
20.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
20.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
20.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
20.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
20.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
19.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
19.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
19.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
19.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
19.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
19.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
19.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
18.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
18.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
18.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
17.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
17.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
17.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
17.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
17.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
16.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
16.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
16.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
15.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
15.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
15.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
15.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
14.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
14.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
13.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
13.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
11.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
11.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
11.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
10.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
7.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
7.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
7.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
7.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
7.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
6.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
6.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
6.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
5.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
4.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
4.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
3.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
2.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
1.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
1.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
1.1
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079480003
Tumor
0.9
CPT0012900004
Tumor
0.9
CPT0012180003
Tumor
0.8
CPT0076330003
Tumor
0.6
CPT0017850003
Tumor
0.6
CPT0088760003
Tumor
0.6
CPT0077490003
Tumor
0.6
CPT0092730003
Tumor
0.6
CPT0001340003
Tumor
0.5
CPT0081990003
Tumor
0.5
CPT0069000003
Tumor
0.5
CPT0025290003
Tumor
0.5
CPT0014370004
Tumor
0.5
CPT0086870003
Tumor
0.5
CPT0081880003
Tumor
0.5
CPT0012920003
Normal
0.4
CPT0077320001
Normal
0.4
CPT0084560003
Tumor
0.4
CPT0025580004
Tumor
0.4
CPT0086950003
Tumor
0.4
CPT0014450004
Tumor
0.4
CPT0092190003
Normal
0.4
CPT0023690003
Tumor
0.4
CPT0077110003
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0079510001
Normal
0.3
CPT0065930003
Tumor
0.3
CPT0011240003
Tumor
0.3
CPT0075560003
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0025230003
Tumor
0.3
CPT0084590001
Normal
0.3
CPT0066470004
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0025050003
Tumor
0.3
CPT0001540009
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0088970003
Tumor
0.3
CPT0078930003
Tumor
0.3
CPT0077310003
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0014160003
Tumor
0.2
CPT0069190001
Normal
0.2
CPT0079230003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0006630003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0077500001
Normal
0.1
CPT0009000003
Tumor
0.1
CPT0015730003
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0079180003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0078510003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0012550003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0066480003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0088570001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0063630003
Tumor
0.1
CPT0078800003
Tumor
0.1
CPT0071150004
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0088780001
Normal
0.1
CPT0000640003
Tumor
0.1
CPT0020130001
Normal
0.0
CPT0089460004
Tumor
0.0
CPT0086030003
Tumor
0.0
CPT0025110003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0007860003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0020120003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0088630003
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0086370003
Normal
0.0
CPT0088900003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0088550004
Tumor
0.0
CPT0088480003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0002350011
Tumor
0.0
CPT0012770003
Normal
0.0
CPT0025880003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0076350001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0002270011
Tumor
-0.1
CPT0065450001
Normal
-0.1
CPT0006440003
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0023350003
Tumor
-0.1
CPT0077140001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0025350003
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0012640003
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0078830003
Tumor
-0.1
CPT0007320003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0001180009
Tumor
-0.2
CPT0088710001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0088690003
Tumor
-0.2
CPT0001550001
Normal
-0.2
CPT0009080003
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0015910003
Tumor
-0.2
CPT0001230001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0000660001
Normal
-0.2
CPT0018250001
Normal
-0.2
CPT0078660003
Tumor
-0.2
CPT0026410003
Tumor
-0.2
CPT0006530001
Normal
-0.2
CPT0064370003
Tumor
-0.2
CPT0089040001
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0000870016
Tumor
-0.2
CPT0092310003
Normal
-0.2
CPT0000890001
Normal
-0.2
CPT0086820003
Tumor
-0.2
CPT0025060001
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0014130001
Normal
-0.2
CPT0001190001
Normal
-0.3
CPT0012290003
Normal
-0.3
CPT0066430001
Normal
-0.3
CPT0019160001
Normal
-0.3
CPT0012090003
Normal
-0.3
CPT0079000001
Normal
-0.3
CPT0063330001
Normal
-0.4
CPT0007470001
Normal
-0.4
CPT0079430001
Normal
-0.4
CPT0014350001
Normal
-0.4
CPT0092740003
Normal
-0.4
CPT0075570001
Normal
-0.4
CPT0011410003
Tumor
-0.4
CPT0026420001
Normal
-0.5
CPT0006730001
Normal
-0.5
CPT0086890003
Normal
-0.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
