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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PHB1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
75.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
354.9
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
250.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
237.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
209.7
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
198.2
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
186.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
170.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
169.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
168.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
153.7
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
147.2
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
142.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
141.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
138.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
137.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
136.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
134.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
131.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
129.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
127.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
124.1
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
120.7
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
120.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
119.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
117.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
117.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
117.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
115.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
115.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
115.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
114.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
114.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
113.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
113.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
112.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
112.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
112.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
112.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
110.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
108.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
108.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
108.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
107.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
107.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
107.3
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
106.6
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
106.3
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
105.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
105.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
104.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
104.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
103.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
103.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
101.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
101.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
101.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
99.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
99.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
98.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
98.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
97.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
96.9
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
96.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
96.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
96.2
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
95.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
95.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
94.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
94.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
93.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
93.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
93.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
92.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
92.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
92.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
91.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
90.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
90.0
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
89.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
89.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
88.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
88.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
88.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
87.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
86.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
86.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
86.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
86.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
86.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
85.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
85.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
84.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
84.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
84.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
84.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
83.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
83.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
83.6
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
83.4
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
83.3
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
83.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
83.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
82.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
82.3
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
81.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
81.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
81.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
81.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
81.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
81.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
80.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
80.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
80.1
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
80.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
79.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
79.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
79.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
79.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
78.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
78.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
78.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
77.6
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
77.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
77.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
77.5
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
77.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
76.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
76.9
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
76.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
75.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
75.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
75.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
75.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
75.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
75.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
74.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
74.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
74.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
74.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
74.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
74.2
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
74.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
73.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
73.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
73.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
73.6
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
73.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
73.4
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
73.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
73.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
73.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
72.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
72.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
72.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
72.5
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
72.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
71.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
71.5
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
71.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
71.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
71.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
71.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
71.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
70.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
70.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
70.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
70.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
70.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
70.3
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
70.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
70.0
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
69.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
69.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
69.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
69.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
69.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
69.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
69.3
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
69.1
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
69.0
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
68.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
68.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
68.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
68.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
68.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
67.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
67.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
67.7
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
67.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
67.6
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
67.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
67.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
67.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
67.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
67.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
67.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
66.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
66.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
66.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
66.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
66.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
66.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
66.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
65.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
64.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
64.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
64.5
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
64.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
64.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
64.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
64.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
63.4
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
63.3
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
63.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
63.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
62.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
62.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
62.4
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
62.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
62.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
62.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
62.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
61.8
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
61.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
61.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
61.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
61.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
61.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
61.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
61.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
60.9
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
60.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
60.7
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
60.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
60.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
60.5
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
60.3
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
60.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
59.7
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
59.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
59.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
59.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
58.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
58.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
58.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
58.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
58.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
58.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
58.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
58.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
58.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
58.2
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
58.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
58.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
58.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
58.1
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
58.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
58.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
57.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
57.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
57.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
57.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
57.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
56.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
56.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
56.3
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
56.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
56.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
55.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
55.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
55.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
55.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
54.8
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
54.7
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
54.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
54.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
54.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
54.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
53.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
53.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
52.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
52.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
51.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
51.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
51.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
51.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
51.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
51.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
50.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
50.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
50.7
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
50.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
50.6
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
50.4
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
50.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
50.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
50.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
49.9
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
49.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
49.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
49.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
49.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
48.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
48.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
48.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
48.0
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
48.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
47.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
47.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
47.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
47.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
47.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
46.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
46.6
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
46.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
46.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
45.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
45.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
45.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
45.8
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
45.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
45.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
45.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
45.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
45.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
45.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
45.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
44.7
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
44.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
44.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
43.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
43.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
43.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
43.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
42.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
42.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
42.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
42.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
42.2
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
41.2
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
41.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
41.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
40.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
40.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
40.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
40.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
39.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
39.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
39.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
37.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
36.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
36.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
35.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
35.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
35.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
34.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
31.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
30.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
30.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
29.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
28.8
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PHB1 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
77.7
Number of samples
231
Samples
Sample
Description
TPM
DO50785
0 years, male, NA, stage:4, dead, 90 days
215.6
DO23525
0 years, male, NA, stage:4, alive, 1050 days
192.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
171.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
167.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
163.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
162.9
DO45307
0 years, female, NA, stage:4, dead, 240 days
161.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
159.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
152.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
151.0
DO45303
0 years, female, NA, stage:3, alive, 990 days
148.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
146.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
143.2
DO23508
0 years, female, NA, stage:2, alive, 390 days
142.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
139.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
138.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
138.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
135.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
134.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
133.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
127.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
127.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
125.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
124.5
DO45267
0 years, male, NA, stage:3, dead, 570 days
123.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
122.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
122.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
121.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
121.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
120.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
120.5
DO45161
0 years, male, NA, stage:2, dead, 540 days
119.4
DO45281
0 years, male, NA, stage:4, alive, 750 days
117.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
116.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
115.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
115.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
114.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
113.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
112.3
DO50799
0 years, female, NA, stage:2, alive, 540 days
111.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
109.6
DO45283
0 years, male, NA, stage:3, alive, 510 days
107.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
107.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
105.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
105.0
DO45117
0 years, female, NA, stage:2, dead, 1110 days
104.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
102.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
102.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
101.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
101.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
100.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
100.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
100.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
98.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
97.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
97.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
96.3
DO23511
0 years, female, NA, stage:3, dead, 180 days
96.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
95.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
94.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
93.0
DO23545
0 years, male, NA, stage:2, dead, 570 days
92.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
92.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
91.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
91.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
91.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
90.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
90.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
90.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
89.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
89.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
88.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
87.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
86.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
85.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
84.9
DO23536
0 years, male, NA, stage:2, alive, 930 days
83.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
83.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
83.1
DO23540
0 years, male, NA, stage:1, alive, 750 days
83.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
83.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
82.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
82.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
82.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
81.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
81.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
81.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
81.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
80.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
80.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
79.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
79.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
78.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
78.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
78.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
77.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
77.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
76.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
75.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
75.3
DO50822
0 years, male, NA, stage:2, alive, 510 days
74.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
74.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
74.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
73.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
73.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
73.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
73.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
73.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
72.7
DO45255
0 years, male, NA, stage:3, alive, 720 days
72.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
72.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
71.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
71.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
71.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
70.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
69.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
69.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
69.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
68.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
67.9
DO45257
0 years, male, NA, stage:3, alive, 810 days
67.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
67.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
67.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
67.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
66.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
66.1
DO45091
0 years, male, NA, stage:2, dead, 1320 days
65.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
65.7
DO45189
0 years, female, NA, stage:2, alive, 1200 days
65.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
65.4
DO48717
0 years, male, NA, stage:4, dead, 180 days
64.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
64.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
64.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
64.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
63.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
63.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
62.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
62.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
62.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
62.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
62.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
62.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
62.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
61.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
61.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
61.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
60.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
59.9
DO45121
0 years, male, NA, stage:3, alive, 1530 days
59.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
59.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
58.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
58.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
58.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
56.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
56.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
56.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
55.9
DO45177
0 years, female, NA, stage:3, alive, 1260 days
54.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
54.2
DO45137
0 years, male, NA, stage:1, alive, 1320 days
54.2
DO45231
0 years, male, NA, stage:2, alive, 930 days
54.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
53.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
53.7
DO23535
0 years, male, NA, stage:1, alive, 960 days
53.4
DO48742
0 years, male, NA, stage:2, alive, 600 days
52.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
52.5
DO45239
0 years, male, NA, stage:2, alive, 870 days
52.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
52.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
52.0
DO45103
0 years, male, NA, stage:3, alive, 450 days
51.9
DO45167
0 years, male, NA, stage:2, dead, 1440 days
51.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
50.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
50.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
50.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
49.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
48.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
48.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
48.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
48.6
DO45149
0 years, female, NA, stage:2, alive, 1260 days
48.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
48.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
48.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
48.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
48.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
48.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
47.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
47.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
47.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
46.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
46.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
46.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
46.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
45.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
45.8
DO45125
0 years, male, NA, stage:3, alive, 1680 days
45.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
45.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
45.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
45.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
45.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
44.9
DO45279
0 years, male, NA, stage:3, alive, 1290 days
43.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
43.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
43.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
43.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
43.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
42.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
42.8
DO45215
0 years, male, NA, stage:2, alive, 1170 days
42.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
42.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
42.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
41.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
41.7
DO45263
0 years, male, NA, stage:3, dead, 270 days
41.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
41.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
40.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
39.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
39.1
DO48733
0 years, male, NA, stage:2, alive, 600 days
39.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
38.9
DO50817
0 years, male, NA, stage:2, alive, 390 days
37.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
37.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
36.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
36.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
36.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
35.4
DO23517
0 years, male, NA, stage:2, alive, 1200 days
34.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
32.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
31.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
31.2
DO45107
0 years, female, NA, stage:2, alive, 1710 days
30.7
DO23544
0 years, male, NA, stage:2, alive, 960 days
26.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
231
Tumor
N/A
352
Normal
N/A
473
Tumor
N/A
111
Normal
N/A
232
Normal
N/A
353
Tumor
N/A
474
Normal
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
483
Tumor
N/A
363
Tumor
N/A
484
Normal
N/A
364
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
487
Tumor
N/A
125
Tumor
N/A
367
Tumor
N/A
488
Normal
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
131
Tumor
N/A
494
Normal
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
497
Tumor
N/A
135
Tumor
N/A
498
Normal
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
937
Tumor
N/A
817
Tumor
N/A
938
Normal
N/A
818
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
145
Tumor
N/A
387
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
943
Tumor
N/A
823
Tumor
N/A
944
Normal
N/A
824
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
1016
Normal
N/A
278
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
951
Tumor
N/A
1013
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
713
Tumor
N/A
955
Tumor
N/A
714
Normal
N/A
956
Normal
N/A
715
Tumor
N/A
957
Tumor
N/A
716
Normal
N/A
958
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
721
Tumor
N/A
963
Tumor
N/A
722
Normal
N/A
964
Normal
N/A
723
Tumor
N/A
965
Tumor
N/A
724
Normal
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
977
Tumor
N/A
615
Tumor
N/A
857
Tumor
N/A
978
Normal
N/A
616
Normal
N/A
737
Tumor
N/A
858
Normal
N/A
617
Tumor
N/A
738
Normal
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
981
Tumor
N/A
861
Tumor
N/A
982
Normal
N/A
741
Tumor
N/A
862
Normal
N/A
983
Tumor
N/A
742
Normal
N/A
863
Tumor
N/A
984
Normal
N/A
1046
Normal
N/A
743
Tumor
N/A
864
Normal
N/A
1045
Tumor
N/A
744
Normal
N/A
865
Tumor
N/A
745
Tumor
N/A
866
Normal
N/A
746
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
513
Tumor
N/A
755
Tumor
N/A
514
Normal
N/A
635
Tumor
N/A
756
Normal
N/A
877
Tumor
N/A
515
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
641
Tumor
N/A
883
Tumor
N/A
642
Normal
N/A
884
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
647
Tumor
N/A
527
Tumor
N/A
648
Normal
N/A
528
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
533
Tumor
N/A
413
Tumor
N/A
534
Normal
N/A
414
Normal
N/A
535
Tumor
N/A
777
Tumor
N/A
415
Tumor
N/A
536
Normal
N/A
778
Normal
N/A
416
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
421
Tumor
N/A
663
Tumor
N/A
422
Normal
N/A
664
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
665
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
545
Tumor
N/A
666
Normal
N/A
425
Tumor
N/A
546
Normal
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
431
Tumor
N/A
311
Tumor
N/A
432
Normal
N/A
553
Tumor
N/A
312
Normal
N/A
433
Tumor
N/A
554
Normal
N/A
313
Tumor
N/A
434
Normal
N/A
314
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
443
Tumor
N/A
564
Normal
N/A
685
Tumor
N/A
444
Normal
N/A
686
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
567
Tumor
N/A
447
Tumor
N/A
568
Normal
N/A
327
Tumor
N/A
448
Normal
N/A
328
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
331
Tumor
N/A
452
Normal
N/A
573
Tumor
N/A
211
Tumor
N/A
332
Normal
N/A
574
Normal
N/A
695
Tumor
N/A
212
Normal
N/A
696
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
342
Normal
N/A
463
Tumor
N/A
222
Normal
N/A
343
Tumor
N/A
464
Normal
N/A
223
Tumor
N/A
344
Normal
N/A
465
Tumor
N/A
224
Normal
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
