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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
114.9
nTPM
HPA Brain:
50.2
nTPM
GTEx:
114.9
nTPM
FANTOM5:
97.3
Scaled Tags Per Million
Pig:
122.4
nTPM
Mouse:
362.8
nTPM
Allen mouse:
22.9
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
50.2
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 32.3
2411
Female, age 72, unknown
56.6
2219
Male, age 76, both hemispheres
53.3
1870
Female, age 42, unknown
37.2
1827
Male, age 72, unknown
36.2
1830
Male, age 51, unknown
30.0
1833
Male, age 53, unknown
27.2
2019
Male, age 18, unknown
26.9
2828
Female, age 72, unknown
24.1
2666
Male, age 74, left hemisphere
21.4
2586
Male, age 75, left hemisphere
10.5
Dorsal raphe nucleus nTPM: 36.6
2298
Female, age 72, unknown
47.2
2750
Male, age 76, both hemispheres
40.0
2047
Male, age 72, unknown
37.6
1828
Male, age 53, unknown
32.8
2016
Female, age 72, unknown
25.4
Inferior colliculus nTPM: 45.7
2097
Female, age 72, unknown
69.7
1848
Female, age 42, unknown
45.3
2849
Male, age 72, unknown
36.6
1890
Male, age 53, unknown
31.3
Median raphe nucleus nTPM: 50.2
2220
Male, age 76, midline
50.2
Periaquaductal grey, anterior nTPM: 30.2
1947
Male, age 18, unknown
32.3
2502
Female, age 75, unknown
32.1
1795
Male, age 51, unknown
26.1
Periaquaductal grey, dorsal nTPM: 36.0
2464
Female, age 72, unknown
43.4
1840
Male, age 53, unknown
40.2
2850
Male, age 76, both hemispheres
33.2
1831
Male, age 72, unknown
27.2
Periaquaductal grey, lateral nTPM: 33.2
2272
Male, age 74, both hemispheres
47.5
2053
Male, age 18, unknown
28.3
2140
Male, age 76, both hemispheres
23.8
Pretectal area nTPM: 39.1
2224
Female, age 72, unknown
61.5
2667
Female, age 75, unknown
46.7
1817
Female, age 42, unknown
46.5
1944
Female, age 72, unknown
46.0
2273
Male, age 74, both hemispheres
41.2
2007
Male, age 72, unknown
38.1
1815
Male, age 53, unknown
37.1
1816
Male, age 51, unknown
36.3
2825
Male, age 18, unknown
27.6
2407
Male, age 75, both hemispheres
26.7
2316
Male, age 76, right hemisphere
22.3
Red nucleus nTPM: 23.6
1821
Female, age 72, unknown
34.6
2584
Male, age 75, left hemisphere
33.0
1954
Female, age 42, unknown
29.5
2785
Male, age 18, unknown
29.2
1865
Male, age 51, unknown
26.8
2725
Female, age 75, unknown
22.4
1904
Male, age 53, unknown
21.7
2769
Male, age 72, unknown
20.7
2227
Male, age 72, unknown
18.8
2823
Male, age 76, right hemisphere
18.1
2503
Female, age 72, unknown
16.8
2588
Male, age 74, left hemisphere
11.1
Substantia nigra nTPM: 38.7
2241
Male, age 72, unknown
64.2
1916
Female, age 42, unknown
51.1
1941
Male, age 53, unknown
48.7
2409
Female, age 72, unknown
44.9
1889
Female, age 72, unknown
43.9
1851
Male, age 51, unknown
41.7
2699
Male, age 18, unknown
33.0
2583
Male, age 75, right hemisphere
24.5
2590
Female, age 75, unknown
22.4
2665
Male, age 74, both hemispheres
12.2
Superior colliculus nTPM: 32.1
1895
Male, age 76, right hemisphere
42.4
2261
Male, age 18, unknown
39.7
2087
Female, age 72, unknown
39.5
2668
Female, age 75, unknown
36.7
1796
Male, age 53, unknown
33.4
1839
Male, age 51, unknown
31.9
2587
Male, age 74, left hemisphere
31.2
1913
Female, age 42, unknown
27.9
1995
Male, age 72, unknown
26.1
2664
Male, age 75, both hemispheres
12.5
Ventral tegmental area nTPM: 44.5
2410
Female, age 72, unknown
65.5
1915
Female, age 42, unknown
46.5
2021
Male, age 53, unknown
44.3
2218
Male, age 76, both hemispheres
44.1
1942
Male, age 51, unknown
35.0
2223
Female, age 72, unknown
31.3
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
114.9
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 114.9
Samples: 139
Max nTPM: 352.2
Min nTPM: 10.9
Std nTPM: 63.8
Median nTPM: 104.5
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
352.2
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
331.4
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
302.7
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
261.2
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
248.9
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
242.4
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
235.8
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
228.8
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
224.8
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
217.0
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
211.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
206.7
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
198.3
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
195.0
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
194.3
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
191.4
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
186.3
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
186.0
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
185.9
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
181.4
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
178.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
174.3
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
169.8
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
169.7
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
169.3
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
167.9
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
165.6
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
163.9
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
162.7
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
161.2
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
160.2
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
158.4
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
158.2
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
154.8
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
153.4
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
152.7
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
151.1
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
148.2
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
147.3
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
144.7
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
144.7
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
143.0
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
139.7
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
139.6
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
139.5
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
135.0
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
134.7
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
132.3
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
131.2
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
130.8
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
128.5
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
128.0
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
126.4
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
122.4
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
122.0
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
119.8
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
119.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
117.0
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
116.6
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
116.3
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
116.1
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
112.4
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
110.1
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
109.9
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
107.9
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
107.0
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
106.5
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
105.1
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
104.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
104.5
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
102.1
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
101.3
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
101.2
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
101.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
98.7
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
97.2
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
95.4
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
94.8
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
93.4
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
93.3
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
93.3
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
92.0
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
91.7
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
91.4
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
91.0
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
88.3
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
87.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
87.4
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
87.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
84.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
82.0
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
80.9
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
80.1
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
79.6
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
77.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
76.8
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
76.1
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
75.4
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
74.5
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
73.6
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
71.9
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
71.6
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
70.8
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
69.3
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
65.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
63.8
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
63.6
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
63.6
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
63.5
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
62.0
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
60.5
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
58.8
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
58.5
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
57.6
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
54.0
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
53.8
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
52.5
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
51.0
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
49.1
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
46.8
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
46.1
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
45.5
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
44.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
42.3
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
42.2
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
41.7
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
41.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
38.7
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
36.3
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
35.9
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
34.5
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
32.2
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
30.9
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
28.0
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
25.8
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
25.5
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
25.0
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
17.4
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
10.9
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
362.8
Mouse sample
Sample description
nTPM
Midbrain nTPM: 362.8
Samples: 4
Max nTPM: 382.5
Min nTPM: 349.5
Sample A
Male
382.5
Sample B
Male
368.7
Sample C
Female
349.5
Sample D
Female
350.4
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.