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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
112.2
nTPM
HPA Brain:
47.7
nTPM
GTEx:
112.2
nTPM
FANTOM5:
81.0
Scaled Tags Per Million
Pig:
88.2
nTPM
Mouse:
296.0
nTPM
Allen mouse:
27.0
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
47.7
Sample id
Sample description
nTPM
Amygdala nTPM: 39.8
2814
Male, age 76, right hemisphere
54.9
1987
Female, age 91, left hemisphere
47.7
2517
Female, age 94, left hemisphere
41.5
2514
Male, age 75, right hemisphere
35.0
2695
Female, age 67, right hemisphere
19.7
Basal amygdala nTPM: 38.3
2685
Female, age 94, left hemisphere
55.2
2110
Male, age 80, left hemisphere
48.5
1955
Male, age 76, both hemispheres
44.9
2243
Female, age 91, right hemisphere
44.7
2609
Male, age 75, right hemisphere
19.2
2827
Female, age 67, right hemisphere
17.6
Central amygdala nTPM: 41.0
2701
Female, age 91, right hemisphere
54.9
2826
Female, age 94, left hemisphere
48.3
2239
Male, age 80, left hemisphere
42.0
1905
Male, age 76, both hemispheres
33.3
2515
Male, age 75, right hemisphere
26.3
Corticomedial amygdala nTPM: 47.7
2429
Female, age 94, left hemisphere
62.2
2242
Female, age 91, right hemisphere
54.4
2240
Male, age 76, both hemispheres
53.7
2829
Male, age 80, left hemisphere
53.5
2535
Female, age 67, right hemisphere
39.5
2428
Male, age 75, right hemisphere
23.3
Lateral amygdala nTPM: 34.8
2534
Female, age 94, left hemisphere
59.7
2255
Female, age 91, right hemisphere
49.4
1883
Male, age 76, both hemispheres
46.3
2256
Male, age 80, left hemisphere
22.2
2516
Male, age 75, right hemisphere
19.4
2830
Female, age 67, right hemisphere
12.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
112.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 112.2
Samples: 152
Max nTPM: 289.8
Min nTPM: 7.4
Std nTPM: 57.7
Median nTPM: 109.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
289.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
265.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
264.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
244.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
242.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
241.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
226.4
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
221.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
214.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
212.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
210.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
210.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
209.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
205.1
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
201.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
196.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
191.2
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
188.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
186.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
184.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
183.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
181.7
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
171.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
164.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
161.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
161.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
159.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
159.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
158.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
157.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
152.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
150.8
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
149.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
148.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
143.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
143.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
143.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
143.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
143.2
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
142.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
142.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
141.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
140.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
140.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
138.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
138.4
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
137.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
137.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
134.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
133.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
130.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
130.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
130.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
130.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
129.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
127.9
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
127.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
126.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
123.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
122.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
121.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
120.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
119.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
119.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
117.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
116.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
116.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
115.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
115.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
114.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
114.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
113.8
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
113.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
112.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
111.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
111.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
107.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
106.2
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
106.0
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
103.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
103.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
102.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
101.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
101.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
100.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
100.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
98.4
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
93.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
92.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
92.7
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
92.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
89.0
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
87.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
84.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
83.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
83.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
83.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
82.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
80.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
80.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
80.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
77.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
76.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
76.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
72.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
71.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
71.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
71.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
70.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
70.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
70.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
67.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
67.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
65.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
64.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
63.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
63.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
62.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
62.4
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
62.4
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
62.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
61.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
60.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
59.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
59.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
58.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
57.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
55.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
53.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
47.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
46.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
45.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
44.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
43.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
42.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
42.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
42.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
42.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
40.9
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
40.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
39.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
39.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
36.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
36.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
33.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
32.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
31.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
31.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
30.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
29.1
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
17.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
7.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
296.0
Mouse sample
Sample description
nTPM
Amygdala nTPM: 296.1
Samples: 4
Max nTPM: 312.6
Min nTPM: 268.1
Sample A
Male
296.7
Sample B
Male
312.6
Sample C
Female
306.8
Sample D
Female
268.1
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.