We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STX3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
104.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
69.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
63.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
62.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
61.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
59.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
51.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
51.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
50.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
48.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
48.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
47.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
46.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
44.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
44.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
44.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
42.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
42.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
42.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
41.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
40.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
37.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
37.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
36.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
36.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
35.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
35.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
32.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
32.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
31.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
31.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
30.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
29.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
29.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
28.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
28.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
27.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
27.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
27.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
25.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
25.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
24.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
23.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
22.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
22.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
22.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
21.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
20.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
19.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
18.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
17.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
17.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
16.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
15.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
15.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
14.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
14.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
14.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
13.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
13.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
10.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
10.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
7.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STX3 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
32.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
185.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
142.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
129.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
96.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
92.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
92.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
88.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
87.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
87.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
86.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
86.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
86.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
85.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
82.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
82.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
79.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
78.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
74.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
73.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
73.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
73.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
72.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
70.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
70.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
68.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
68.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
66.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
65.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
65.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
65.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
63.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
63.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
62.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
62.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
61.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
61.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
60.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
60.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
60.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
60.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
60.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
59.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
58.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
58.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
58.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
58.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
57.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
57.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
57.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
56.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
56.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
56.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
55.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
55.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
55.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
54.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
54.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
54.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
53.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
53.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
53.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
53.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
53.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
53.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
52.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
52.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
51.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
51.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
51.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
51.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
51.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
50.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
50.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
50.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
49.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
49.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
49.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
49.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
49.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
48.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
48.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
48.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
48.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
47.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
47.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
47.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
47.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
47.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
47.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
47.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
47.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
47.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
46.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
46.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
46.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
46.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
46.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
46.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
46.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
46.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
46.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
45.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
45.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
45.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
45.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
45.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
45.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
44.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
44.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
44.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
44.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
44.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
44.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
43.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
43.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
43.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
43.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
43.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
43.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
43.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
43.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
43.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
42.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
42.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
42.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
42.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
42.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
42.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
41.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
41.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
41.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
41.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
41.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
41.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
41.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
41.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
40.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
40.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
40.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
40.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
40.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
40.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
40.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
40.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
40.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
40.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
39.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
39.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
39.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
39.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
39.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
39.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
39.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
39.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
39.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
39.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
39.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
38.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
38.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
38.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
38.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
38.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
38.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
38.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
37.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
37.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
37.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
37.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
37.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
37.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
37.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
37.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
37.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
37.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
37.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
37.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
37.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
36.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
36.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
36.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
36.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
36.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
36.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
36.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
36.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
35.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
35.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
35.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
35.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
35.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
35.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
35.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
35.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
35.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
35.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
35.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
35.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
35.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
34.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
34.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
34.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
34.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
34.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
34.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
34.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
34.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
34.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
34.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
34.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
33.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
33.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
33.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
33.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
33.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
33.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
33.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
33.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
33.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
33.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
33.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
33.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
33.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
33.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
33.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
32.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
32.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
32.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
32.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
32.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
32.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
32.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
32.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
32.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
32.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
32.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
31.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
31.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
31.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
31.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
31.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
31.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
31.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
31.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
30.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
30.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
30.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
30.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
30.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
30.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
30.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
30.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
30.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
30.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
30.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
29.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
29.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
29.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
29.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
29.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
29.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
29.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
29.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
29.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
29.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
29.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
29.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
29.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
29.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
29.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
29.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
28.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
28.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
28.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
28.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
28.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
28.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
28.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
28.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
28.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
28.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
28.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
27.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
27.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
27.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
27.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
27.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
27.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
27.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
27.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
27.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
27.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
27.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
26.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
26.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
26.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
26.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
26.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
26.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
26.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
26.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
26.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
26.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
26.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
26.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
26.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
26.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
26.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
26.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
25.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
25.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
25.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
25.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
25.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
25.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
25.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
25.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
25.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
25.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
25.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
25.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
25.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
25.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
25.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
25.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
25.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
25.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
25.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
24.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
24.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
24.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
24.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
24.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
24.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
24.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
24.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
24.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
24.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
24.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
23.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
23.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
23.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
23.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
23.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
23.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
23.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
23.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
23.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
23.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
23.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
23.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
23.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
22.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
22.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
22.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
22.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
22.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
22.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
22.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
22.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
21.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
21.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
21.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
21.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
21.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
21.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
21.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
21.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
21.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
21.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
21.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
21.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
20.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
20.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
20.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
20.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
20.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
20.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
20.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
20.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
20.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
20.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
20.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
19.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
19.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
19.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
19.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
19.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
19.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
19.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
19.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
19.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
19.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
19.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
19.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
19.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
19.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
19.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
18.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
18.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
18.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
18.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
18.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
18.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
18.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
18.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
18.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
18.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
18.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
18.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
18.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
18.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
17.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
17.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
17.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
17.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
17.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
17.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
17.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
17.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
17.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
16.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
16.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
16.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
16.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
16.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
16.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
16.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
16.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
16.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
16.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
16.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
15.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
15.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
15.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
15.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
15.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
15.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
15.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
15.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
15.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
14.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
14.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
14.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
14.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
14.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
14.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
14.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
14.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
14.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
14.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
14.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
14.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
14.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
13.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
13.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
13.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
13.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
13.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
13.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
13.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
13.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
13.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
13.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
12.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
12.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
12.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
12.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
12.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
12.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
12.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
12.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
12.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
12.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
12.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
12.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
11.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
11.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
11.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
11.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
11.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
11.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
11.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
11.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
11.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
11.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
11.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
10.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
10.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
10.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
10.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
10.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
10.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
10.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
10.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
10.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
10.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
10.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
10.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
9.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
9.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
9.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
9.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
9.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
8.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
8.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
8.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
8.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
7.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
7.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
7.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
7.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
6.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
6.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
5.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
5.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STX3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
50.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
143.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
111.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
109.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
100.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
90.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
89.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
87.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
78.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
77.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
72.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
72.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
70.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
69.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
69.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
67.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
65.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
65.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
64.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
64.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
63.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
63.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
62.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
61.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
61.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
61.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
60.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
59.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
59.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
59.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
58.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
58.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
57.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
57.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
56.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
56.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
56.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
56.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
55.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
54.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
54.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
54.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
53.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
52.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
52.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
51.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
51.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
51.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
50.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
50.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
49.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
49.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
48.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
48.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
48.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
47.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
46.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
45.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
44.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
44.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
44.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
43.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
43.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
42.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
42.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
41.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
41.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
40.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
40.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
39.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
39.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
39.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
38.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
38.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
37.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
36.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
35.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
35.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
34.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
34.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
34.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
33.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
32.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
30.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
30.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
29.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
28.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
28.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
27.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
26.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
25.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
24.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
23.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
21.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
20.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
20.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
19.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
18.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
18.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STX3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
42.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
159.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
135.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
118.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
118.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
108.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
103.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
100.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
97.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
92.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
91.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
88.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
88.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
87.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
85.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
81.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
81.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
81.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
80.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
80.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
80.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
80.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
79.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
78.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
77.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
77.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
76.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
76.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
74.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
74.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
72.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
72.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
70.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
69.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
67.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
67.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
67.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
66.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
65.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
65.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
63.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
63.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
63.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
63.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
63.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
63.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
61.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
61.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
61.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
60.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
59.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
59.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
59.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
57.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
57.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
57.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
57.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
57.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
55.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
55.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
54.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
54.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
53.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
53.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
53.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
52.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
52.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
52.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
52.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
52.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
51.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
50.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
49.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
49.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
49.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
49.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
49.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
49.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
48.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
48.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
48.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
48.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
48.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
47.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
47.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
47.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
47.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
47.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
47.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
47.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
46.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
46.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
46.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
46.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
46.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
45.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
45.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
45.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
45.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
44.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
44.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
44.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
43.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
43.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
43.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
43.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
42.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
42.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
42.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
41.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
41.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
41.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
41.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
41.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
41.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
40.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
40.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
40.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
40.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
40.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
40.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
40.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
39.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
39.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
39.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
39.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
39.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
38.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
38.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
38.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
38.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
38.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
38.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
38.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
38.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
38.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
38.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
37.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
37.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
37.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
37.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
36.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
36.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
36.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
36.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
36.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
36.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
36.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
36.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
36.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
36.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
35.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
35.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
35.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
35.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
35.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
35.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
35.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
35.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
35.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
35.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
34.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
34.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
34.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
34.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
34.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
34.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
34.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
34.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
34.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
34.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
34.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
34.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
34.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
33.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
33.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
33.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
33.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
32.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
32.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
32.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
31.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
31.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
31.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
31.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
31.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
31.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
31.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
31.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
31.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
30.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
30.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
30.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
30.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
30.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
30.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
30.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
30.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
29.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
29.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
29.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
29.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
28.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
28.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
28.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
28.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
28.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
28.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
28.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
28.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
28.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
28.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
28.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
27.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
27.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
27.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
27.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
26.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
26.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
26.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
26.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
26.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
26.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
26.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
25.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
25.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
25.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
25.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
25.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
25.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
25.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
25.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
25.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
25.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
24.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
24.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
24.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
23.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
23.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
23.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
23.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
23.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
22.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
22.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
22.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
22.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
22.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
22.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
22.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
22.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
22.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
21.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
21.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
21.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
21.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
21.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
20.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
20.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
19.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
19.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
19.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
18.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
18.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
18.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
18.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
18.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
17.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
17.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
17.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
17.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
17.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
17.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
16.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
16.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
16.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
14.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
13.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
13.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
13.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
12.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
12.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
11.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
9.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
1.2
CPT0065450001
Normal
1.1
CPT0089480003
Normal
1.1
CPT0026420001
Normal
1.0
CPT0001350001
Normal
1.0
CPT0023360001
Normal
1.0
CPT0092740003
Normal
0.9
CPT0092800003
Normal
0.9
CPT0001190001
Normal
0.9
CPT0023710001
Normal
0.8
CPT0006950001
Normal
0.8
CPT0000790001
Normal
0.8
CPT0092310003
Normal
0.8
CPT0079430001
Normal
0.8
CPT0012770003
Normal
0.8
CPT0088710001
Normal
0.8
CPT0077500001
Normal
0.8
CPT0082010001
Normal
0.8
CPT0010170001
Normal
0.7
CPT0025060001
Normal
0.7
CPT0066430001
Normal
0.7
CPT0078840001
Normal
0.7
CPT0013790003
Normal
0.7
CPT0077140001
Normal
0.7
CPT0088920001
Normal
0.6
CPT0012290003
Normal
0.6
CPT0014350001
Normal
0.6
CPT0012090003
Normal
0.6
CPT0076350001
Normal
0.5
CPT0089040001
Normal
0.5
CPT0088780001
Normal
0.5
CPT0006730001
Normal
0.5
CPT0020130001
Normal
0.5
CPT0087050003
Normal
0.5
CPT0014130001
Normal
0.5
CPT0063640001
Normal
0.5
CPT0000890001
Normal
0.4
CPT0088640003
Normal
0.4
CPT0018250001
Normal
0.4
CPT0001270001
Normal
0.4
CPT0081620001
Normal
0.4
CPT0012570003
Normal
0.4
CPT0007470001
Normal
0.4
CPT0086830003
Normal
0.4
CPT0006530001
Normal
0.4
CPT0078660003
Tumor
0.4
CPT0017450001
Normal
0.4
CPT0020020001
Normal
0.4
CPT0086970003
Normal
0.3
CPT0086890003
Normal
0.3
CPT0069010001
Normal
0.3
CPT0001510001
Normal
0.3
CPT0066520001
Normal
0.3
CPT0007320003
Tumor
0.3
CPT0075570001
Normal
0.3
CPT0079000001
Normal
0.2
CPT0065430003
Tumor
0.2
CPT0065820001
Normal
0.2
CPT0001230001
Normal
0.2
CPT0078530001
Normal
0.2
CPT0088570001
Normal
0.2
CPT0000660001
Normal
0.2
CPT0025920001
Normal
0.2
CPT0025610001
Normal
0.2
CPT0015730003
Tumor
0.2
CPT0088500001
Normal
0.1
CPT0012280003
Tumor
0.1
CPT0078670001
Normal
0.1
CPT0088970003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0086370003
Normal
0.1
CPT0001550001
Normal
0.1
CPT0009080003
Normal
0.1
CPT0002270011
Tumor
0.0
CPT0012920003
Normal
0.0
CPT0078940001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0086030003
Tumor
0.0
CPT0019160001
Normal
-0.1
CPT0015810003
Tumor
-0.1
CPT0023350003
Tumor
-0.1
CPT0064400001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0065750003
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0063330001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0014370004
Tumor
-0.2
CPT0086820003
Tumor
-0.2
CPT0024670003
Tumor
-0.2
CPT0009020003
Normal
-0.2
CPT0001180009
Tumor
-0.2
CPT0007870001
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0086950003
Tumor
-0.2
CPT0069000003
Tumor
-0.3
CPT0010160003
Tumor
-0.3
CPT0014160003
Tumor
-0.3
CPT0084590001
Normal
-0.3
CPT0079480003
Tumor
-0.3
CPT0078930003
Tumor
-0.3
CPT0089460004
Tumor
-0.3
CPT0012370003
Tumor
-0.3
CPT0002370001
Normal
-0.3
CPT0092160003
Tumor
-0.4
CPT0063630003
Tumor
-0.4
CPT0026410003
Tumor
-0.4
CPT0006440003
Tumor
-0.4
CPT0075720003
Tumor
-0.4
CPT0079270003
Tumor
-0.4
CPT0000640003
Tumor
-0.4
CPT0078800003
Tumor
-0.4
CPT0009060003
Tumor
-0.4
CPT0065810003
Tumor
-0.4
CPT0011410003
Tumor
-0.4
CPT0063320003
Tumor
-0.4
CPT0006900003
Tumor
-0.4
CPT0064370003
Tumor
-0.4
CPT0079410003
Tumor
-0.4
CPT0010110003
Tumor
-0.4
CPT0079230003
Tumor
-0.5
CPT0025580004
Tumor
-0.5
CPT0077310003
Tumor
-0.5
CPT0088760003
Tumor
-0.5
CPT0076330003
Tumor
-0.5
CPT0075130003
Tumor
-0.5
CPT0025110003
Tumor
-0.5
CPT0092290003
Tumor
-0.5
CPT0066470004
Tumor
-0.5
CPT0006630003
Tumor
-0.5
CPT0014450004
Tumor
-0.5
CPT0077110003
Tumor
-0.5
CPT0088900003
Tumor
-0.5
CPT0088630003
Tumor
-0.6
CPT0012550003
Tumor
-0.6
CPT0025880003
Tumor
-0.6
CPT0078830003
Tumor
-0.6
CPT0087040003
Tumor
-0.6
CPT0089020003
Tumor
-0.6
CPT0012640003
Normal
-0.6
CPT0012900004
Tumor
-0.6
CPT0079380003
Tumor
-0.6
CPT0025230003
Tumor
-0.6
CPT0000780007
Tumor
-0.6
CPT0081990003
Tumor
-0.6
CPT0077490003
Tumor
-0.6
CPT0001220008
Tumor
-0.6
CPT0065930003
Tumor
-0.6
CPT0066480003
Tumor
-0.6
CPT0081880003
Tumor
-0.6
CPT0092730003
Tumor
-0.7
CPT0001340003
Tumor
-0.7
CPT0025050003
Tumor
-0.7
CPT0092790003
Tumor
-0.7
CPT0001540009
Tumor
-0.7
CPT0078990003
Tumor
-0.7
CPT0071150004
Tumor
-0.7
CPT0077320001
Normal
-0.7
CPT0021240003
Tumor
-0.7
CPT0025350003
Tumor
-0.7
CPT0009000003
Tumor
-0.7
CPT0007860003
Tumor
-0.8
CPT0088550004
Tumor
-0.8
CPT0065870003
Tumor
-0.8
CPT0019990003
Tumor
-0.8
CPT0023690003
Tumor
-0.8
CPT0081600003
Tumor
-0.8
CPT0012670003
Tumor
-0.8
CPT0085670003
Tumor
-0.8
CPT0079300001
Normal
-0.8
CPT0065690003
Tumor
-0.9
CPT0002350011
Tumor
-0.9
CPT0025290003
Tumor
-0.9
CPT0086870003
Tumor
-0.9
CPT0092190003
Normal
-0.9
CPT0001260009
Tumor
-0.9
CPT0000870016
Tumor
-0.9
CPT0012080003
Tumor
-0.9
CPT0069160003
Tumor
-0.9
CPT0075560003
Tumor
-1.0
CPT0011240003
Tumor
-1.0
CPT0088690003
Tumor
-1.0
CPT0015910003
Tumor
-1.0
CPT0017850003
Tumor
-1.0
CPT0079510001
Normal
-1.1
CPT0017410003
Tumor
-1.2
CPT0012180003
Tumor
-1.2
CPT0078510003
Tumor
-1.3
CPT0084560003
Tumor
-1.3
Show allShow less
RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
