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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TERF2IP is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.9
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
72.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
67.4
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
60.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
57.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
53.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
44.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
44.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
42.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
41.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
41.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
40.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
40.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
38.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
38.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
37.8
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
37.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
37.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
37.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
36.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
36.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
36.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
35.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
34.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
34.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
34.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
34.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
34.1
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
33.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
33.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
33.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
32.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
32.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
32.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
31.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
31.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
31.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
30.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
30.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
30.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
29.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
29.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
29.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
28.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
28.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
28.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
28.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
28.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
28.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
28.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
28.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
27.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
27.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
27.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
27.7
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
27.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
27.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
27.2
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
26.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
26.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
26.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
26.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
26.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
26.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
26.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
26.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
26.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
25.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
25.8
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
25.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
25.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
25.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
25.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
25.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
25.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
24.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
24.7
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
24.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
24.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
24.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
24.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
24.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
23.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
23.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
23.7
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
23.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
23.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
23.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
23.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
23.5
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
23.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
23.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
23.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
23.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
23.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
23.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
23.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
22.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
22.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
22.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
22.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
22.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
22.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
22.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
22.5
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
22.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
22.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
22.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
22.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
22.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
22.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
22.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
22.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
22.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
22.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
22.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
21.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
21.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
21.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
21.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
21.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
21.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
21.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
21.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
21.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
21.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
21.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
21.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
21.5
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
21.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
21.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
21.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
21.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
21.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
20.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
20.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
20.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
20.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
20.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
20.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
20.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
20.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
20.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
20.6
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
20.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
20.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
20.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
20.3
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
20.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
20.0
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
19.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
19.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
19.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
19.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
19.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
19.5
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
19.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
19.4
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
19.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
19.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
19.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
19.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
19.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
19.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
19.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
19.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
19.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
19.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
19.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
19.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
19.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
18.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
18.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
18.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
18.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
18.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
18.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
18.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
18.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
18.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
18.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
18.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
18.2
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
18.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
18.2
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
18.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
18.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
18.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
18.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
18.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
18.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
18.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
17.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
17.8
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
17.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
17.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
17.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
17.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
17.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
17.6
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
17.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
17.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
17.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
17.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
17.6
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
17.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
17.5
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
17.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
17.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
17.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
17.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
17.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
17.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
17.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
17.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
17.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
16.9
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
16.9
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
16.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
16.8
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
16.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
16.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
16.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
16.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
16.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
16.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
16.4
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
16.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
16.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
16.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
16.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
16.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
16.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
16.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
16.0
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
15.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
15.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
15.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
15.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
15.8
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
15.7
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
15.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
15.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
15.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
15.5
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
15.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
15.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
15.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
15.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
15.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
15.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
15.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
15.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
15.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
15.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
15.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
15.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
15.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
14.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
14.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
14.8
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
14.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
14.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
14.7
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
14.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
14.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
14.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
14.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
14.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
14.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
14.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
14.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
14.3
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
14.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
13.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
13.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
13.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
13.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
13.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
13.7
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
13.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
13.6
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
13.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
13.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
13.3
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
13.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
13.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
13.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
13.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
13.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
13.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
12.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
12.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
12.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
12.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
12.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
12.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
12.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
12.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
12.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
12.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
12.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
12.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
12.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
12.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
12.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
11.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
11.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
11.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
11.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
11.6
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
11.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
11.6
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
11.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
11.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
11.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
11.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
11.2
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
11.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
11.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
11.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
10.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
10.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
10.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
10.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
10.7
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
10.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
10.6
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
10.6
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
10.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
10.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
10.3
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
10.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
10.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
10.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
10.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
10.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
10.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
9.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
9.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
9.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
9.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
9.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
9.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
9.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
9.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
9.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
9.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
9.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
9.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
8.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
8.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
8.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
7.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
7.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
7.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
7.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
6.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
6.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
5.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
5.6
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
5.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TERF2IP is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.8
Number of samples
231
Samples
Sample
Description
TPM
DO45185
0 years, male, NA, stage:2, alive, 600 days
70.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
50.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
50.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
48.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
48.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
46.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
42.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
41.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
41.1
DO45251
0 years, female, NA, stage:2, alive, 900 days
40.3
DO45303
0 years, female, NA, stage:3, alive, 990 days
40.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
40.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
38.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
38.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
37.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
37.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
37.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
35.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
35.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
34.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
34.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
34.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
33.9
DO23549
0 years, male, NA, stage:3, alive, 990 days
33.8
DO48697
0 years, female, NA, stage:2, dead, 810 days
33.7
DO23516
0 years, male, NA, stage:3, dead, 20 days
33.5
DO48737
0 years, male, NA, stage:1, alive, 720 days
33.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
32.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
32.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
32.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
31.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
30.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
30.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
30.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
30.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
30.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
29.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
29.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
28.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
28.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
28.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
28.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
28.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
28.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
28.1
DO45261
0 years, male, NA, stage:3, alive, 990 days
27.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
27.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
27.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
27.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
26.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
26.8
DO45133
0 years, male, NA, stage:3, dead, 660 days
26.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
26.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
26.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
26.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
26.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
26.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
25.9
DO48730
0 years, female, NA, stage:2, alive, 630 days
25.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
25.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
25.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
25.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
25.5
DO45161
0 years, male, NA, stage:2, dead, 540 days
25.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
24.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
24.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
24.7
DO45135
0 years, male, NA, stage:1, alive, 1410 days
24.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
24.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
24.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
24.5
DO50811
0 years, male, NA, stage:1, alive, 450 days
24.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
24.3
DO45205
0 years, female, NA, stage:2, dead, 90 days
24.2
DO48757
0 years, female, NA, stage:3, alive, 480 days
24.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
24.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
23.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
23.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
23.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
23.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
23.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
22.9
DO45233
0 years, male, NA, stage:3, alive, 900 days
22.9
DO45159
0 years, male, NA, stage:3, alive, 1470 days
22.8
DO48677
0 years, male, NA, stage:3, alive, 1140 days
22.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
22.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
22.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
22.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
22.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
22.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
22.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
22.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
22.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
21.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
21.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
21.6
DO45127
0 years, male, NA, stage:3, dead, 420 days
21.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
21.4
DO50805
0 years, male, NA, stage:2, alive, 690 days
21.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
21.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
21.3
DO48695
0 years, male, NA, stage:2, alive, 720 days
21.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
21.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
21.2
DO227643
0 years, male, NA, stage:2, alive, 1260 days
21.1
DO48700
0 years, female, NA, stage:2, alive, 810 days
21.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
20.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
20.7
DO45203
0 years, female, NA, stage:2, alive, 1170 days
20.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
20.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
20.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
20.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
20.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
19.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
19.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
19.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
19.6
DO45129
0 years, male, NA, stage:3, alive, 1470 days
19.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
19.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
19.4
DO23517
0 years, male, NA, stage:2, alive, 1200 days
19.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
19.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
19.3
DO23518
0 years, male, NA, stage:2, alive, 1320 days
19.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
19.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
19.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
19.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
19.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
19.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
18.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
18.9
DO48736
0 years, female, NA, stage:1, alive, 600 days
18.9
DO50825
0 years, male, NA, stage:2, alive, 390 days
18.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
18.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
18.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
18.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
18.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
18.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
18.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
18.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
18.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
18.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
18.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
18.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
17.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
17.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
17.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
17.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
17.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
17.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
17.4
DO45213
0 years, male, NA, stage:1, alive, 1200 days
17.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
17.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
17.2
DO45115
0 years, male, NA, stage:2, alive, 840 days
17.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
17.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
17.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
17.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
17.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
17.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
17.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
16.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
16.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
16.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
16.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
16.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
16.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
16.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
16.2
DO45111
0 years, male, NA, stage:2, alive, 1590 days
16.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
16.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
16.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
16.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
15.7
DO50840
0 years, male, NA, stage:2, alive, 330 days
15.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
15.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
15.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
15.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
15.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
15.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
15.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
15.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
15.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
15.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
14.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
14.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
14.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
14.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
14.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
14.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
14.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
14.4
DO45219
0 years, male, NA, stage:2, alive, 1080 days
14.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
14.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
14.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
14.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
14.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
14.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
14.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
13.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
13.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
13.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
13.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
13.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
13.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
12.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
12.7
DO45167
0 years, male, NA, stage:2, dead, 1440 days
12.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
12.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
12.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
12.3
DO50798
0 years, male, NA, stage:3, dead, 30 days
12.1
DO23509
0 years, male, NA, stage:3, dead, 780 days
12.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
11.8
DO48741
0 years, male, NA, stage:3, alive, 240 days
11.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
11.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
11.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
11.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
11.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
11.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
10.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
10.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
10.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
9.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
9.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
8.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
8.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
8.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
8.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
7.9
DO45149
0 years, female, NA, stage:2, alive, 1260 days
7.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
685
Tumor
1.0
661
Tumor
0.9
813
Tumor
0.8
1027
Tumor
0.8
814
Normal
0.8
527
Tumor
0.7
351
Tumor
0.7
777
Tumor
0.7
391
Tumor
0.7
724
Normal
0.7
211
Tumor
0.6
977
Tumor
0.6
917
Tumor
0.6
867
Tumor
0.5
951
Tumor
0.5
741
Tumor
0.5
965
Tumor
0.5
535
Tumor
0.5
715
Tumor
0.5
524
Normal
0.5
863
Tumor
0.5
277
Tumor
0.5
171
Tumor
0.4
383
Tumor
0.4
1031
Tumor
0.4
455
Tumor
0.4
413
Tumor
0.4
425
Tumor
0.4
493
Tumor
0.4
497
Tumor
0.4
415
Tumor
0.4
721
Tumor
0.4
367
Tumor
0.4
213
Tumor
0.4
492
Normal
0.4
331
Tumor
0.4
433
Tumor
0.4
516
Normal
0.4
444
Normal
0.3
963
Tumor
0.3
146
Normal
0.3
536
Normal
0.3
145
Tumor
0.3
881
Tumor
0.3
483
Tumor
0.3
192
Normal
0.3
517
Tumor
0.3
514
Normal
0.3
975
Tumor
0.3
141
Tumor
0.3
384
Normal
0.3
231
Tumor
0.3
1041
Tumor
0.3
635
Tumor
0.3
387
Tumor
0.3
463
Tumor
0.3
224
Normal
0.3
518
Normal
0.3
267
Tumor
0.3
873
Tumor
0.3
498
Normal
0.3
467
Tumor
0.3
865
Tumor
0.3
221
Tumor
0.3
823
Tumor
0.3
138
Normal
0.3
217
Tumor
0.3
355
Tumor
0.3
958
Normal
0.3
427
Tumor
0.3
357
Tumor
0.3
445
Tumor
0.3
697
Tumor
0.2
135
Tumor
0.2
297
Tumor
0.2
727
Tumor
0.2
477
Tumor
0.2
395
Tumor
0.2
662
Normal
0.2
743
Tumor
0.2
528
Normal
0.2
147
Tumor
0.2
187
Tumor
0.2
877
Tumor
0.2
136
Normal
0.2
943
Tumor
0.2
185
Tumor
0.2
966
Normal
0.2
913
Tumor
0.2
861
Tumor
0.2
434
Normal
0.2
271
Tumor
0.2
268
Normal
0.2
852
Normal
0.2
421
Tumor
0.2
278
Normal
0.2
188
Normal
0.2
447
Tumor
0.2
955
Tumor
0.2
1042
Normal
0.2
353
Tumor
0.2
451
Tumor
0.2
916
Normal
0.2
1044
Normal
0.2
488
Normal
0.2
538
Normal
0.2
191
Tumor
0.2
664
Normal
0.2
523
Tumor
0.2
922
Normal
0.2
362
Normal
0.2
471
Tumor
0.2
478
Normal
0.2
815
Tumor
0.2
976
Normal
0.2
366
Normal
0.2
365
Tumor
0.1
964
Normal
0.1
126
Normal
0.1
513
Tumor
0.1
553
Tumor
0.1
968
Normal
0.1
858
Normal
0.1
671
Tumor
0.1
628
Normal
0.1
341
Tumor
0.1
481
Tumor
0.1
1015
Tumor
0.1
563
Tumor
0.1
857
Tumor
0.1
312
Normal
0.1
954
Normal
0.1
132
Normal
0.1
537
Tumor
0.1
526
Normal
0.1
925
Tumor
0.1
262
Normal
0.1
343
Tumor
0.1
261
Tumor
0.1
386
Normal
0.1
1045
Tumor
0.1
672
Normal
0.1
557
Tumor
0.1
921
Tumor
0.1
967
Tumor
0.1
648
Normal
0.1
1032
Normal
0.1
272
Normal
0.1
332
Normal
0.1
641
Tumor
0.1
472
Normal
0.1
443
Tumor
0.1
456
Normal
0.1
786
Normal
0.1
284
Normal
0.1
212
Normal
0.1
311
Tumor
0.1
686
Normal
0.1
461
Tumor
0.1
525
Tumor
0.1
448
Normal
0.1
113
Tumor
0.1
376
Normal
0.1
696
Normal
0.1
361
Tumor
0.1
1046
Normal
0.1
558
Normal
0.1
515
Tumor
0.1
327
Tumor
0.1
232
Normal
0.1
983
Tumor
0.1
554
Normal
0.1
882
Normal
0.1
912
Normal
0.0
665
Tumor
0.0
298
Normal
0.0
714
Normal
0.0
627
Tumor
0.0
778
Normal
0.0
424
Normal
0.0
344
Normal
0.0
375
Tumor
0.0
617
Tumor
0.0
574
Normal
0.0
738
Normal
0.0
953
Tumor
0.0
354
Normal
0.0
352
Normal
0.0
468
Normal
0.0
883
Tumor
0.0
494
Normal
0.0
938
Normal
0.0
342
Normal
0.0
571
Tumor
0.0
713
Tumor
0.0
978
Normal
0.0
666
Normal
0.0
944
Normal
0.0
491
Tumor
0.0
137
Tumor
0.0
385
Tumor
0.0
414
Normal
0.0
698
Normal
0.0
785
Tumor
0.0
911
Tumor
0.0
466
Normal
0.0
723
Tumor
0.0
283
Tumor
0.0
452
Normal
0.0
981
Tumor
0.0
572
Normal
0.0
728
Normal
0.0
824
Normal
0.0
416
Normal
0.0
818
Normal
0.0
663
Tumor
0.0
482
Normal
0.0
756
Normal
0.0
742
Normal
0.0
358
Normal
0.0
396
Normal
0.0
368
Normal
0.0
1043
Tumor
0.0
567
Tumor
0.0
228
Normal
0.0
218
Normal
0.0
1026
Normal
0.0
186
Normal
0.0
161
Tumor
0.0
816
Normal
0.0
982
Normal
0.0
868
Normal
0.0
428
Normal
0.0
388
Normal
0.0
874
Normal
0.0
313
Tumor
0.0
924
Normal
0.0
914
Normal
0.0
956
Normal
0.0
1021
Tumor
-0.1
755
Tumor
-0.1
636
Normal
-0.1
474
Normal
-0.1
464
Normal
-0.1
952
Normal
-0.1
722
Normal
-0.1
716
Normal
-0.1
436
Normal
-0.1
1014
Normal
-0.1
195
Tumor
-0.1
112
Tumor
-0.1
878
Normal
-0.1
172
Normal
-0.1
465
Tumor
-0.1
412
Normal
-0.1
923
Tumor
-0.1
884
Normal
-0.1
484
Normal
-0.1
432
Normal
-0.1
462
Normal
-0.1
642
Normal
-0.1
546
Normal
-0.1
123
Tumor
-0.1
356
Normal
-0.1
545
Tumor
-0.1
744
Normal
-0.1
866
Normal
-0.1
446
Normal
-0.1
314
Normal
-0.1
918
Normal
-0.1
564
Normal
-0.1
473
Tumor
-0.1
148
Normal
-0.1
817
Tumor
-0.1
394
Normal
-0.1
363
Tumor
-0.1
426
Normal
-0.1
1016
Normal
-0.1
746
Normal
-0.1
422
Normal
-0.1
258
Normal
-0.1
926
Normal
-0.1
864
Normal
-0.1
223
Tumor
-0.1
615
Tumor
-0.1
392
Normal
-0.1
862
Normal
-0.2
286
Normal
-0.2
364
Normal
-0.2
1028
Normal
-0.2
162
Normal
-0.2
568
Normal
-0.2
214
Normal
-0.2
534
Normal
-0.2
957
Tumor
-0.2
737
Tumor
-0.2
1025
Tumor
-0.2
937
Tumor
-0.2
616
Normal
-0.2
984
Normal
-0.2
285
Tumor
-0.2
618
Normal
-0.2
124
Normal
-0.2
111
Normal
-0.2
114
Normal
-0.2
411
Tumor
-0.2
328
Normal
-0.2
227
Tumor
-0.2
533
Tumor
-0.2
1022
Normal
-0.2
647
Tumor
-0.2
435
Tumor
-0.3
142
Normal
-0.3
196
Normal
-0.3
222
Normal
-0.3
487
Tumor
-0.3
431
Tumor
-0.3
915
Tumor
-0.4
127
Tumor
-0.4
257
Tumor
-0.4
423
Tumor
-0.4
851
Tumor
-0.4
128
Normal
-0.4
1013
Tumor
-0.4
393
Tumor
-0.5
573
Tumor
-0.5
131
Tumor
-0.6
125
Tumor
-0.6
695
Tumor
-0.6
745
Tumor
-0.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
