HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:141.7 nTPM
HPA Brain:165.2 nTPM
GTEx:141.7 nTPM
FANTOM5:251.5 Scaled Tags Per Million
Pig:63.4 nTPM
Mouse:28.9 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006719Antibody CAB018660Antibody CAB018749
Glial cells LowLowLow
Neuronal cells HighHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 165.2
Sample id Sample description nTPM
Hippocampus
nTPM: 129.8
1898 Male, age 80, left hemisphere 155.0
2529 Female, age 94, left hemisphere 135.0
1855 Male, age 76, left hemisphere 128.5
2621 Female, age 67, right hemisphere 122.6
2148 Female, age 91, left hemisphere 121.9
1911 Female, age 85, right hemisphere 115.6
Dentate gyrus
nTPM: 133.6
1927 Female, age 91, both hemispheres 151.7
2010 Male, age 76, both hemispheres 136.3
2530 Female, age 94, left hemisphere 135.9
2246 Female, age 85, both hemispheres 132.8
2528 Male, age 74, both hemispheres 127.0
2531 Female, age 67, both hemispheres 117.7
Entorhinal gyrus
nTPM: 138.7
2764 Male, age 80, right hemisphere 169.6
1938 Female, age 85, left hemisphere 161.4
1787 Male, age 76, left hemisphere 138.6
2117 Female, age 91, right hemisphere 135.3
2613 Female, age 94, left hemisphere 123.5
2686 Male, age 75, right hemisphere 103.7
Hippocampus, CA1
nTPM: 145.6
2749 Male, age 80, left hemisphere 199.3
2527 Male, age 74, both hemispheres 138.9
1873 Female, age 85, both hemispheres 138.8
2045 Male, age 76, both hemispheres 136.4
2082 Female, age 91, right hemisphere 114.6
Hippocampus, CA2
nTPM: 132.5
1963 Male, age 80, left hemisphere 160.6
1892 Male, age 76, both hemispheres 147.7
2249 Male, age 74, both hemispheres 133.7
1940 Female, age 85, left hemisphere 121.1
2113 Female, age 91, right hemisphere 120.4
2437 Female, age 94, left hemisphere 111.6
Hippocampus, CA3
nTPM: 127.0
2137 Male, age 80, left hemisphere 156.7
1867 Male, age 76, both hemispheres 134.1
2620 Female, age 94, left hemisphere 132.9
2436 Male, age 74, both hemispheres 127.6
1891 Female, age 85, both hemispheres 116.9
2861 Female, age 67, both hemispheres 93.8
Parahippocampal cortex
nTPM: 137.3
1850 Male, age 80, both hemispheres 165.5
1990 Female, age 91, right hemisphere 151.1
1933 Female, age 85, both hemispheres 150.0
2250 Female, age 67, right hemisphere 149.5
2245 Female, age 91, both hemispheres 149.2
2532 Female, age 72, left hemisphere 145.4
2018 Male, age 76, both hemispheres 128.7
2693 Female, age 94, both hemispheres 115.6
2692 Male, age 74, both hemispheres 114.9
2622 Female, age 67, right hemisphere 102.7
Perirhinal gyrus
nTPM: 165.2
1794 Male, age 80, right hemisphere 185.7
1847 Female, age 91, left hemisphere 179.1
1841 Female, age 85, right hemisphere 165.6
2521 Female, age 94, right hemisphere 155.8
2848 Male, age 76, right hemisphere 139.9
Subiculum
nTPM: 124.1
1977 Female, age 85, both hemispheres 164.8
1901 Male, age 80, both hemispheres 129.5
2619 Male, age 74, both hemispheres 123.0
2438 Female, age 94, left hemisphere 113.7
2042 Male, age 76, both hemispheres 109.6
2729 Female, age 91, right hemisphere 104.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 141.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 141.7
Samples: 197

Max nTPM: 265.6
Min nTPM: 65.6
Std nTPM: 35.1
Median nTPM: 135.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 265.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 233.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 216.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 215.6
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 215.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 215.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 212.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 211.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 210.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 207.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 207.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 251.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 251.5
FF:10169-103B7 60 years, female 294.9
FF:10153-102I9 76 years, female 208.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 63.4
Pig sample Sample description nTPM
Subiculum
nTPM: 58.6
Samples: 4

Max nTPM: 78.0
Min nTPM: 51.2
Sample A Female 78.0
Sample B Female 53.7
Sample C Male 51.4
Sample D Male 51.2
Dorsal hippocampus
nTPM: 63.4
Samples: 4

Max nTPM: 77.6
Min nTPM: 54.5
Sample A Female 77.6
Sample B Female 60.2
Sample C Male 61.3
Sample D Male 54.5
Entorhinal cortex
nTPM: 53.6
Samples: 4

Max nTPM: 59.0
Min nTPM: 43.1
Sample A Female 59.0
Sample B Female 55.2
Sample C Male 57.1
Sample D Male 43.1
Ventral hippocampus
nTPM: 58.7
Samples: 4

Max nTPM: 65.6
Min nTPM: 46.1
Sample A Female 63.3
Sample B Female 46.1
Sample C Male 65.6
Sample D Male 59.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 28.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.3
Samples: 4

Max nTPM: 29.8
Min nTPM: 27.4
Sample A Male 28.0
Sample B Male 27.4
Sample C Female 28.1
Sample D Female 29.8
Hippocampal formation
nTPM: 28.9
Samples: 4

Max nTPM: 29.5
Min nTPM: 27.5
Sample A Male 29.3
Sample B Male 29.5
Sample C Female 29.2
Sample D Female 27.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
100144105 Antisense, RP_110421_01_D11, Mouse strain C57BL/6J (56 days, male) 3.4
112196711 Antisense, RP_110421_01_D11, Mouse strain C57BL/6J (56 days, male) 3.4

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