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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GLYATL1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
30.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
18.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
17.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
11.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
6.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
5.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
2.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
0.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
0.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
0.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
0.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
0.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
0.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GLYATL1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
152.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
125.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
119.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
118.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
106.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
102.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
96.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
93.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
93.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
89.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
86.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
85.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
85.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
83.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
82.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
81.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
78.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
77.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
77.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
77.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
75.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
75.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
75.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
73.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
73.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
72.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
72.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
71.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
70.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
70.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
70.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
69.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
69.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
68.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
68.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
67.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
67.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
67.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
67.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
66.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
65.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
65.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
65.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
65.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
63.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
63.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
63.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
62.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
62.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
62.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
62.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
61.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
61.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
60.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
58.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
58.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
57.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
57.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
57.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
56.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
55.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
55.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
55.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
54.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
53.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
53.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
53.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
52.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
52.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
52.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
52.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
51.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
51.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
51.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
51.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
51.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
50.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
50.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
49.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
49.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
49.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
49.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
49.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
49.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
48.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
48.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
48.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
48.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
47.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
47.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
46.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
46.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
46.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
45.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
45.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
45.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
45.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
45.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
45.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
45.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
44.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
44.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
44.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
44.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
44.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
44.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
44.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
43.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
43.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
43.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
42.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
42.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
42.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
42.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
42.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
42.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
41.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
41.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
41.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
41.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
41.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
41.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
40.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
40.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
40.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
40.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
40.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
40.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
40.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
39.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
39.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
39.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
39.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
39.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
39.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
39.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
39.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
38.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
38.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
38.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
38.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
38.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
38.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
37.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
37.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
37.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
36.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
36.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
36.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
36.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
36.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
36.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
36.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
36.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
35.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
35.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
35.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
35.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
34.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
34.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
34.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
34.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
34.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
34.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
34.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
34.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
34.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
34.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
34.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
34.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
33.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
33.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
33.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
33.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
33.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
33.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
32.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
32.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
32.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
32.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
31.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
31.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
31.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
31.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
31.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
30.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
30.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
30.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
30.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
30.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
29.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
29.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
29.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
29.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
28.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
28.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
28.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
28.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
28.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
28.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
28.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
28.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
28.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
28.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
27.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
27.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
27.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
27.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
27.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
27.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
26.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
26.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
26.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
26.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
26.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
26.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
26.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
26.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
26.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
26.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
26.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
25.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
25.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
25.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
25.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
25.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
25.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
25.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
25.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
25.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
25.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
25.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
25.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
25.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
25.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
25.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
25.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
25.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
24.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
24.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
24.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
24.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
24.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
24.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
24.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
23.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
23.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
23.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
23.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
23.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
23.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
23.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
22.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
22.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
22.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
22.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
22.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
22.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
21.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
21.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
21.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
21.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
21.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
21.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
21.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
21.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
21.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
21.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
21.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
21.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
21.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
20.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
20.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
20.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
20.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
20.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
20.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
19.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
19.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
19.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
19.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
19.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
19.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
19.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
19.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
19.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
19.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
19.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
19.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
19.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
18.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
18.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
18.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
18.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
18.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
18.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
18.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
18.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
18.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
18.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
18.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
17.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
17.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
17.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
17.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
17.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
17.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
17.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
17.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
17.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
17.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
17.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
17.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
17.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
16.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
16.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
16.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
16.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
16.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
16.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
15.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
15.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
15.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
15.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
15.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
15.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
15.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
15.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
15.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
15.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
15.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
15.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
15.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
15.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
15.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
15.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
14.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
14.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
14.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
14.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
14.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
14.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
14.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
14.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
14.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
14.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
14.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
14.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
14.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
14.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
13.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
13.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
13.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
13.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
13.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
13.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
12.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
12.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
12.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
12.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
12.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
12.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
12.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
12.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
11.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
11.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
11.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
11.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
11.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
11.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
11.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
11.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
11.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
11.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
11.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
11.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
11.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
10.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
10.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
10.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
10.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
10.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
9.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
9.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
9.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
9.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
9.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
9.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
9.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
9.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
9.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
9.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
9.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
9.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
8.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
8.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
8.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
8.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
8.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
8.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
8.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
8.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
8.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
8.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
8.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
8.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
8.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
7.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
7.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
7.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
7.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
7.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
7.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
7.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
6.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
6.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
6.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
6.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
6.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
5.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
5.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
5.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
5.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
5.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
5.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
5.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
5.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
5.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
4.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
4.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
4.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
4.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
4.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
4.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
4.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
4.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
4.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
4.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
4.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
3.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
3.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
3.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
3.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
3.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
3.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
3.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
3.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
3.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
3.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
3.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
3.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
3.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
3.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
3.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
2.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
2.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
2.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
2.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
2.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
2.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
2.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
2.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
2.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
2.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
2.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
2.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
2.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
2.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
1.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
1.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
1.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
1.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
1.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
1.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
1.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
1.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
1.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
0.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
0.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
0.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
0.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
0.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
0.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
0.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
0.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
0.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
0.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
0.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
0.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
0.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
0.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
0.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
0.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
0.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
0.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
0.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
0.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
0.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
0.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
0.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
0.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
0.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GLYATL1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
202.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
166.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
109.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
108.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
98.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
92.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
90.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
85.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
78.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
75.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
74.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
72.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
69.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
68.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
66.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
65.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
65.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
64.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
61.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
61.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
60.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
60.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
57.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
53.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
52.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
52.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
51.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
51.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
51.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
50.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
50.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
50.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
47.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
45.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
45.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
44.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
42.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
41.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
40.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
38.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
38.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
38.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
37.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
36.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
35.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
34.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
34.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
33.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
31.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
31.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
31.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
28.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
27.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
25.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
25.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
24.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
24.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
21.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
20.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
20.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
20.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
20.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
20.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
20.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
19.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
18.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
17.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
17.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
17.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
16.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
16.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
16.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
16.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
15.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
15.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
13.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
13.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
13.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
12.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
9.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
8.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
7.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
6.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
6.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
5.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
5.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
5.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
5.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
4.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
3.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
3.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
2.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
1.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
1.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GLYATL1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
254.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
147.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
117.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
89.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
80.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
79.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
77.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
77.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
68.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
61.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
60.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
58.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
56.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
55.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
53.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
52.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
50.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
47.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
45.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
45.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
44.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
42.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
42.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
40.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
40.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
39.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
38.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
38.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
38.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
37.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
37.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
36.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
36.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
34.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
34.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
33.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
32.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
31.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
31.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
30.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
30.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
30.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
30.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
30.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
29.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
29.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
29.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
29.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
29.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
29.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
29.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
28.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
28.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
27.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
27.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
27.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
26.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
26.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
26.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
26.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
26.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
26.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
26.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
25.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
24.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
24.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
24.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
24.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
24.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
23.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
23.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
23.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
22.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
22.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
22.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
22.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
22.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
22.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
22.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
22.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
22.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
22.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
21.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
21.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
20.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
20.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
20.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
20.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
20.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
20.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
20.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
20.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
20.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
20.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
19.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
19.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
19.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
19.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
19.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
19.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
19.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
18.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
18.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
18.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
18.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
18.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
18.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
18.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
17.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
17.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
17.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
17.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
16.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
16.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
16.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
16.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
16.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
16.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
16.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
16.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
15.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
15.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
15.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
15.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
15.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
15.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
15.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
15.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
15.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
14.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
14.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
14.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
14.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
14.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
14.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
14.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
13.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
13.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
13.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
13.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
13.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
13.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
13.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
13.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
13.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
13.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
12.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
12.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
12.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
12.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
12.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
12.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
12.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
12.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
11.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
11.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
11.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
11.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
11.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
11.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
11.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
11.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
11.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
11.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
11.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
11.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
10.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
10.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
10.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
10.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
10.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
10.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
10.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
10.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
10.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
9.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
9.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
9.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
9.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
9.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
9.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
9.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
9.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
9.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
9.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
9.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
9.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
9.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
8.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
8.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
8.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
8.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
8.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
8.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
8.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
8.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
8.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
8.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
7.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
7.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
7.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
7.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
7.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
7.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
7.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
6.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
6.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
6.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
6.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
6.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
6.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
6.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
6.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
5.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
5.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
5.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
5.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
5.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
5.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
5.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
5.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
5.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
5.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
5.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
4.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
4.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
4.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
4.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
4.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
3.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
3.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
3.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
3.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
3.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
3.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
3.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
3.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
3.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
3.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
3.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
3.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
3.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
2.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
2.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
2.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
2.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
2.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
2.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
2.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
2.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
2.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
2.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
2.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
1.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
1.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
1.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
1.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
1.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
1.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
1.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
1.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
0.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
0.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
0.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
0.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
0.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
0.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
0.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
0.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088780001
Normal
1.8
CPT0012770003
Normal
1.4
CPT0006950001
Normal
1.3
CPT0065450001
Normal
1.2
CPT0020020001
Normal
1.2
CPT0081620001
Normal
1.2
CPT0023710001
Normal
1.2
CPT0087050003
Normal
1.2
CPT0078670001
Normal
1.2
CPT0092800003
Normal
1.2
CPT0013790003
Normal
1.1
CPT0025610001
Normal
1.1
CPT0092740003
Normal
1.1
CPT0009080003
Normal
1.1
CPT0007470001
Normal
1.1
CPT0079000001
Normal
1.1
CPT0069010001
Normal
1.1
CPT0000790001
Normal
1.1
CPT0092310003
Normal
1.1
CPT0089480003
Normal
1.1
CPT0007870001
Normal
1.1
CPT0088920001
Normal
1.1
CPT0064400001
Normal
1.0
CPT0014350001
Normal
1.0
CPT0006730001
Normal
1.0
CPT0078840001
Normal
1.0
CPT0026420001
Normal
1.0
CPT0066430001
Normal
1.0
CPT0077140001
Normal
1.0
CPT0012570003
Normal
1.0
CPT0086370003
Normal
1.0
CPT0001350001
Normal
1.0
CPT0012090003
Normal
0.9
CPT0086970003
Normal
0.9
CPT0088500001
Normal
0.9
CPT0010170001
Normal
0.9
CPT0079430001
Normal
0.9
CPT0082010001
Normal
0.9
CPT0020130001
Normal
0.8
CPT0086890003
Normal
0.8
CPT0077500001
Normal
0.8
CPT0023360001
Normal
0.8
CPT0089040001
Normal
0.8
CPT0078940001
Normal
0.8
CPT0000890001
Normal
0.8
CPT0063640001
Normal
0.7
CPT0078530001
Normal
0.7
CPT0014130001
Normal
0.7
CPT0088710001
Normal
0.7
CPT0088640003
Normal
0.7
CPT0025060001
Normal
0.6
CPT0019160001
Normal
0.6
CPT0012920003
Normal
0.6
CPT0012290003
Normal
0.5
CPT0014470001
Normal
0.5
CPT0063330001
Normal
0.5
CPT0017450001
Normal
0.4
CPT0076350001
Normal
0.4
CPT0009020003
Normal
0.4
CPT0018250001
Normal
0.4
CPT0025920001
Normal
0.4
CPT0024680001
Normal
0.4
CPT0065820001
Normal
0.4
CPT0075570001
Normal
0.3
CPT0001510001
Normal
0.3
CPT0001550001
Normal
0.3
CPT0088570001
Normal
0.3
CPT0086830003
Normal
0.2
CPT0000660001
Normal
0.2
CPT0001230001
Normal
0.2
CPT0066520001
Normal
0.2
CPT0002370001
Normal
0.2
CPT0001500009
Tumor
0.1
CPT0006530001
Normal
0.0
CPT0015730003
Tumor
-0.2
CPT0001190001
Normal
-0.2
CPT0012640003
Normal
-0.3
CPT0010120001
Normal
-0.3
CPT0023690003
Tumor
-0.4
CPT0069190001
Normal
-0.4
CPT0075170001
Normal
-0.5
CPT0012900004
Tumor
-0.5
CPT0001270001
Normal
-0.6
CPT0078510003
Tumor
-0.6
CPT0075560003
Tumor
-0.6
CPT0078830003
Tumor
-0.6
CPT0088480003
Tumor
-0.7
CPT0007320003
Tumor
-0.7
CPT0079300001
Normal
-0.8
CPT0025170003
Tumor
-0.8
CPT0019990003
Tumor
-0.8
CPT0089460004
Tumor
-0.8
CPT0006900003
Tumor
-0.9
CPT0064370003
Tumor
-0.9
CPT0001540009
Tumor
-0.9
CPT0012280003
Tumor
-0.9
CPT0078930003
Tumor
-0.9
CPT0092290003
Tumor
-1.0
CPT0009060003
Tumor
-1.0
CPT0079510001
Normal
-1.0
CPT0014370004
Tumor
-1.0
CPT0066480003
Tumor
-1.0
CPT0077310003
Tumor
-1.1
CPT0007860003
Tumor
-1.1
CPT0000870016
Tumor
-1.1
CPT0066470004
Tumor
-1.1
CPT0071150004
Tumor
-1.2
CPT0079410003
Tumor
-1.2
CPT0014160003
Tumor
-1.2
CPT0063320003
Tumor
-1.2
CPT0000780007
Tumor
-1.2
CPT0015810003
Tumor
-1.2
CPT0065810003
Tumor
-1.2
CPT0077490003
Tumor
-1.2
CPT0015910003
Tumor
-1.2
CPT0006440003
Tumor
-1.2
CPT0086360003
Tumor
-1.2
CPT0020120003
Tumor
-1.2
CPT0025580004
Tumor
-1.2
CPT0010160003
Tumor
-1.3
CPT0011240003
Tumor
-1.3
CPT0065430003
Tumor
-1.3
CPT0086870003
Tumor
-1.3
CPT0081600003
Tumor
-1.3
CPT0078800003
Tumor
-1.3
CPT0026410003
Tumor
-1.3
CPT0075720003
Tumor
-1.3
CPT0010110003
Tumor
-1.4
CPT0081990003
Tumor
-1.4
CPT0076330003
Tumor
-1.4
CPT0025050003
Tumor
-1.4
CPT0087040003
Tumor
-1.4
CPT0092790003
Tumor
-1.4
CPT0019130003
Tumor
-1.4
CPT0001260009
Tumor
-1.4
CPT0086820003
Tumor
-1.5
CPT0092160003
Tumor
-1.5
CPT0086950003
Tumor
-1.5
CPT0079480003
Tumor
-1.5
CPT0012670003
Tumor
-1.5
CPT0001220008
Tumor
-1.6
CPT0006630003
Tumor
-1.6
CPT0092190003
Normal
-1.6
CPT0017410003
Tumor
-1.6
CPT0012550003
Tumor
-1.6
CPT0065870003
Tumor
-1.7
CPT0065750003
Tumor
-1.7
CPT0077110003
Tumor
-1.7
CPT0024670003
Tumor
-1.7
CPT0025880003
Tumor
-1.7
CPT0009000003
Tumor
-1.7
CPT0077320001
Normal
-1.7
CPT0002270011
Tumor
-1.7
CPT0000640003
Tumor
-1.7
CPT0084590001
Normal
-1.7
CPT0088970003
Tumor
-1.8
CPT0012370003
Tumor
-1.8
CPT0078990003
Tumor
-1.8
CPT0021240003
Tumor
-1.8
CPT0089020003
Tumor
-1.8
CPT0014450004
Tumor
-1.8
CPT0088630003
Tumor
-1.9
CPT0079270003
Tumor
-1.9
CPT0088760003
Tumor
-1.9
CPT0088900003
Tumor
-1.9
CPT0025110003
Tumor
-2.0
CPT0069160003
Tumor
-2.0
CPT0075130003
Tumor
-2.0
CPT0079180003
Tumor
-2.0
CPT0092730003
Tumor
-2.0
CPT0069000003
Tumor
-2.1
CPT0088690003
Tumor
-2.2
CPT0023350003
Tumor
-2.2
CPT0001180009
Tumor
-2.3
CPT0065930003
Tumor
-2.3
CPT0065690003
Tumor
-2.3
CPT0086030003
Tumor
-2.4
CPT0025350003
Tumor
-2.4
CPT0002350011
Tumor
-2.4
CPT0012080003
Tumor
-2.4
CPT0012180003
Tumor
-2.4
CPT0063630003
Tumor
-2.4
CPT0085670003
Tumor
-2.5
CPT0025290003
Tumor
-2.6
CPT0001340003
Tumor
-2.6
CPT0084560003
Tumor
-2.7
CPT0017850003
Tumor
-2.7
CPT0088550004
Tumor
-2.7
CPT0011410003
Tumor
-2.8
CPT0078660003
Tumor
-2.8
CPT0081880003
Tumor
-2.8
CPT0079230003
Tumor
-2.9
CPT0025230003
Tumor
-3.1
CPT0079380003
Tumor
-3.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.