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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM135 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
30.8
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
21.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
20.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
20.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
19.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
18.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
18.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
17.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
17.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
17.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
17.2
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
17.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
17.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
16.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
16.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
16.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
16.3
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
16.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
16.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
16.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
16.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
15.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
15.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
15.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
15.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
14.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
14.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
14.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
14.4
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
14.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
14.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
13.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
13.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
13.7
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
13.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
13.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
13.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
13.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
13.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
13.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
13.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
13.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
13.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
13.0
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
12.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
12.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
12.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
12.5
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
12.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
12.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
12.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
12.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
12.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
12.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
12.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
11.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
11.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
11.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
11.9
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
11.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
11.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
11.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
11.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
11.6
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
11.6
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
11.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
11.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
11.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
11.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
11.4
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
11.4
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
11.3
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
11.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
11.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
11.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
11.2
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
11.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
11.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
10.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
10.8
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
10.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
10.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
10.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
10.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
10.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
10.4
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
10.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
10.3
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
10.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
10.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
10.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
10.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
10.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
10.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
10.0
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
9.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
9.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
9.8
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
9.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
9.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
9.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
9.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
9.6
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
9.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
9.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
9.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
9.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
9.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
9.2
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
9.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
9.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
9.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
9.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
9.0
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
9.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
8.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
8.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
8.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
8.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
8.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
8.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
8.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
8.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
8.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
8.5
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
8.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
8.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
8.4
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
8.3
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
8.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
8.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
8.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
8.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
8.1
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
8.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
8.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
8.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
8.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
8.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
8.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
8.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
8.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
8.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
8.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
7.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
7.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
7.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
7.8
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
7.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
7.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
7.7
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
7.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
7.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
7.6
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
7.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
7.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
7.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
7.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
7.4
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
7.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
7.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
7.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
7.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
7.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
7.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
7.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
7.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
7.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
7.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
7.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
7.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
7.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
7.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
7.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
6.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
6.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
6.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
6.9
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
6.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
6.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
6.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
6.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
6.8
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
6.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
6.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
6.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
6.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
6.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
6.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
6.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
6.6
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
6.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
6.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
6.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
6.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
6.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
6.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
6.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
6.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
6.4
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
6.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
6.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
6.3
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
6.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
6.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
6.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
6.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
6.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
6.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
6.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
6.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
6.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
6.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
5.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
5.9
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
5.9
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
5.9
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
5.9
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
5.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
5.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
5.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
5.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
5.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
5.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
5.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
5.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
5.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
5.5
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
5.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
5.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
5.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
5.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
5.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
5.3
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
5.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
5.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
5.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
5.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
5.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
5.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
5.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
5.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
5.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
5.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
5.1
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5.0
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
5.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
5.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
4.9
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
4.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
4.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
4.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
4.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
4.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
4.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
4.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
4.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
4.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
4.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
4.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
4.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
4.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
4.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
4.6
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
4.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
4.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
4.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
4.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
4.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
4.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
4.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
4.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
4.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
4.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
4.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
4.3
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
4.3
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
4.3
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
4.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
4.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
4.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
4.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
4.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
4.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
4.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
4.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
4.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
4.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
3.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
3.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
3.9
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
3.8
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
3.8
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
3.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
3.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
3.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
3.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
3.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
3.7
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
3.7
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
3.7
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
3.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
3.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
3.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
3.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
3.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
3.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
3.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
3.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
3.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
3.5
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
3.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
3.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
3.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
3.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
3.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
3.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
3.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
3.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
3.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
3.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
3.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
3.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
3.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
3.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
3.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
3.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
3.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
3.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
3.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
3.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
3.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
3.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
3.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
3.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
3.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
2.9
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
2.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
2.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
2.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
2.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
2.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
2.7
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
2.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
2.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
2.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
2.5
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
2.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
2.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
2.3
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
2.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
2.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
1.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
1.9
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1.3
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM135 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
3.8
Number of samples
231
Samples
Sample
Description
TPM
DO45119
0 years, male, NA, stage:3, dead, 510 days
14.1
DO48672
0 years, male, NA, stage:2, alive, 450 days
13.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
12.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
11.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
9.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
9.1
DO48733
0 years, male, NA, stage:2, alive, 600 days
8.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
8.6
DO45191
0 years, female, NA, stage:2, alive, 1200 days
8.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
8.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
8.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
7.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
7.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
7.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
7.2
DO45145
0 years, male, NA, stage:3, dead, 60 days
7.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
7.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
7.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
6.9
DO23535
0 years, male, NA, stage:1, alive, 960 days
6.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
6.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
6.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
6.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
6.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
6.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
6.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
5.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
5.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
5.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
5.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
5.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
5.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
5.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
5.7
DO45189
0 years, female, NA, stage:2, alive, 1200 days
5.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
5.7
DO50820
0 years, female, NA, stage:3, alive, 510 days
5.6
DO45129
0 years, male, NA, stage:3, alive, 1470 days
5.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
5.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
5.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
5.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
5.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
5.3
DO45183
0 years, female, NA, stage:2, dead, 570 days
5.3
DO45187
0 years, female, NA, stage:1, alive, 1260 days
5.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
5.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
5.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
5.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
5.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
4.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
4.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
4.9
DO45173
0 years, male, NA, stage:3, alive, 1170 days
4.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
4.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
4.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
4.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
4.7
DO45179
0 years, female, NA, stage:2, alive, 600 days
4.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
4.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
4.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
4.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
4.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
4.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
4.5
DO45163
0 years, male, NA, stage:2, alive, 960 days
4.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
4.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
4.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
4.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
4.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
4.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
4.2
DO45165
0 years, male, NA, stage:2, alive, 690 days
4.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
4.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
4.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
4.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
4.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
4.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
4.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
4.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
4.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
4.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
4.0
DO23521
0 years, male, NA, stage:3, alive, 1110 days
3.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
3.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
3.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
3.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
3.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
3.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
3.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
3.8
DO45125
0 years, male, NA, stage:3, alive, 1680 days
3.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
3.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
3.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
3.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
3.7
DO48706
0 years, male, NA, stage:2, alive, 870 days
3.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
3.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
3.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
3.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
3.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
3.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
3.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
3.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
3.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
3.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
3.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
3.5
DO45273
0 years, male, NA, stage:2, alive, 480 days
3.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
3.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
3.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
3.4
DO48717
0 years, male, NA, stage:4, dead, 180 days
3.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
3.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
3.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
3.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
3.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
3.3
DO48721
0 years, female, NA, stage:1, alive, 900 days
3.3
DO23534
0 years, male, NA, stage:2, alive, 840 days
3.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
3.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
3.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
3.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
3.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
3.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
3.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
3.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
3.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
3.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
3.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
3.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
3.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
3.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
3.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
3.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
3.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
3.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
3.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
3.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
3.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
2.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
2.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
2.9
DO23549
0 years, male, NA, stage:3, alive, 990 days
2.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
2.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
2.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
2.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
2.8
DO50803
0 years, female, NA, stage:1, alive, 540 days
2.8
DO45193
0 years, female, NA, stage:4, dead, 120 days
2.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
2.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
2.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
2.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
2.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
2.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
2.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
2.8
DO23543
0 years, male, NA, stage:2, alive, 1020 days
2.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
2.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
2.7
DO45287
0 years, male, NA, stage:1, alive, 390 days
2.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
2.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
2.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
2.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
2.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
2.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
2.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
2.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
2.6
DO45115
0 years, male, NA, stage:2, alive, 840 days
2.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
2.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
2.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
2.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
2.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
2.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
2.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
2.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
2.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
2.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
2.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
2.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
2.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
2.3
DO48674
0 years, male, NA, stage:2, alive, 1260 days
2.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
2.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
2.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
2.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
2.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
2.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
2.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
2.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
2.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
2.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
2.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
2.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
2.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
2.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
2.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
2.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
2.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
2.1
DO48747
0 years, male, NA, stage:3, alive, 540 days
2.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
2.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
2.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
2.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
2.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
2.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
1.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
1.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
1.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
1.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
1.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
1.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
1.8
DO45301
0 years, male, NA, stage:2, dead, 1440 days
1.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
1.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
1.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
1.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
1.7
DO23551
0 years, male, NA, stage:3, dead, 150 days
1.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
1.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
1.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
1.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
1.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
1.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
1.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
1.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
1.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
1.2
DO45285
0 years, male, NA, stage:3, alive, 480 days
1.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
1.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
0.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
873
Tumor
2.2
911
Tumor
1.8
533
Tumor
1.7
363
Tumor
1.7
745
Tumor
1.6
145
Tumor
1.3
147
Tumor
1.3
685
Tumor
1.2
755
Tumor
1.2
513
Tumor
1.2
925
Tumor
1.1
883
Tumor
1.0
915
Tumor
1.0
477
Tumor
1.0
431
Tumor
1.0
191
Tumor
1.0
171
Tumor
0.9
1027
Tumor
0.9
851
Tumor
0.8
223
Tumor
0.8
1031
Tumor
0.8
436
Normal
0.7
557
Tumor
0.7
823
Tumor
0.7
1041
Tumor
0.7
863
Tumor
0.6
257
Tumor
0.6
416
Normal
0.6
424
Normal
0.5
741
Tumor
0.5
435
Tumor
0.5
443
Tumor
0.5
617
Tumor
0.5
428
Normal
0.5
1043
Tumor
0.5
483
Tumor
0.5
563
Tumor
0.5
473
Tumor
0.5
538
Normal
0.5
464
Normal
0.4
523
Tumor
0.4
414
Normal
0.4
195
Tumor
0.4
137
Tumor
0.4
635
Tumor
0.4
727
Tumor
0.4
1025
Tumor
0.4
421
Tumor
0.4
187
Tumor
0.4
913
Tumor
0.4
412
Normal
0.4
954
Normal
0.4
314
Normal
0.4
861
Tumor
0.3
446
Normal
0.3
427
Tumor
0.3
537
Tumor
0.3
186
Normal
0.3
868
Normal
0.3
615
Tumor
0.3
136
Normal
0.3
463
Tumor
0.3
494
Normal
0.3
432
Normal
0.3
262
Normal
0.3
517
Tumor
0.3
422
Normal
0.3
938
Normal
0.3
462
Normal
0.3
364
Normal
0.2
465
Tumor
0.2
862
Normal
0.2
415
Tumor
0.2
878
Normal
0.2
228
Normal
0.2
572
Normal
0.2
874
Normal
0.2
515
Tumor
0.2
648
Normal
0.2
461
Tumor
0.2
148
Normal
0.2
172
Normal
0.2
365
Tumor
0.2
864
Normal
0.2
777
Tumor
0.2
664
Normal
0.2
224
Normal
0.2
112
Tumor
0.2
824
Normal
0.2
534
Normal
0.2
884
Normal
0.2
357
Tumor
0.2
123
Tumor
0.2
514
Normal
0.2
448
Normal
0.2
882
Normal
0.2
111
Normal
0.2
666
Normal
0.2
923
Tumor
0.2
865
Tumor
0.2
451
Tumor
0.2
361
Tumor
0.1
487
Tumor
0.1
981
Tumor
0.1
222
Normal
0.1
356
Normal
0.1
354
Normal
0.1
196
Normal
0.1
466
Normal
0.1
141
Tumor
0.1
456
Normal
0.1
218
Normal
0.1
341
Tumor
0.1
114
Normal
0.1
642
Normal
0.1
746
Normal
0.1
714
Normal
0.1
328
Normal
0.1
353
Tumor
0.1
867
Tumor
0.1
384
Normal
0.1
393
Tumor
0.1
1028
Normal
0.1
912
Normal
0.1
125
Tumor
0.1
278
Normal
0.1
455
Tumor
0.1
636
Normal
0.1
411
Tumor
0.1
647
Tumor
0.1
162
Normal
0.1
113
Tumor
0.1
387
Tumor
0.1
327
Tumor
0.1
958
Normal
0.1
627
Tumor
0.0
471
Tumor
0.0
135
Tumor
0.0
146
Normal
0.0
138
Normal
0.0
484
Normal
0.0
866
Normal
0.0
267
Tumor
0.0
284
Normal
0.0
491
Tumor
0.0
914
Normal
0.0
1042
Normal
0.0
1014
Normal
0.0
358
Normal
0.0
232
Normal
0.0
391
Tumor
0.0
272
Normal
0.0
214
Normal
0.0
1016
Normal
0.0
1015
Tumor
0.0
728
Normal
0.0
616
Normal
0.0
628
Normal
0.0
452
Normal
0.0
858
Normal
0.0
957
Tumor
0.0
564
Normal
0.0
1021
Tumor
0.0
474
Normal
0.0
127
Tumor
0.0
126
Normal
0.0
571
Tumor
0.0
964
Normal
0.0
132
Normal
0.0
128
Normal
0.0
313
Tumor
-0.1
978
Normal
-0.1
298
Normal
-0.1
426
Normal
-0.1
966
Normal
-0.1
445
Tumor
-0.1
261
Tumor
-0.1
142
Normal
-0.1
568
Normal
-0.1
665
Tumor
-0.1
686
Normal
-0.1
924
Normal
-0.1
188
Normal
-0.1
434
Normal
-0.1
482
Normal
-0.1
355
Tumor
-0.1
738
Normal
-0.1
258
Normal
-0.1
922
Normal
-0.1
468
Normal
-0.1
818
Normal
-0.1
312
Normal
-0.1
852
Normal
-0.1
742
Normal
-0.1
1032
Normal
-0.1
185
Tumor
-0.1
977
Tumor
-0.1
478
Normal
-0.1
554
Normal
-0.1
286
Normal
-0.1
1045
Tumor
-0.1
217
Tumor
-0.1
926
Normal
-0.1
662
Normal
-0.1
1026
Normal
-0.1
481
Tumor
-0.1
388
Normal
-0.1
756
Normal
-0.1
124
Normal
-0.1
472
Normal
-0.1
444
Normal
-0.1
192
Normal
-0.1
778
Normal
-0.2
392
Normal
-0.2
518
Normal
-0.2
984
Normal
-0.2
362
Normal
-0.2
663
Tumor
-0.2
558
Normal
-0.2
394
Normal
-0.2
574
Normal
-0.2
268
Normal
-0.2
567
Tumor
-0.2
982
Normal
-0.2
916
Normal
-0.2
516
Normal
-0.2
396
Normal
-0.2
332
Normal
-0.2
816
Normal
-0.2
1046
Normal
-0.2
526
Normal
-0.2
212
Normal
-0.2
955
Tumor
-0.2
968
Normal
-0.2
423
Tumor
-0.2
918
Normal
-0.2
952
Normal
-0.2
376
Normal
-0.2
573
Tumor
-0.2
352
Normal
-0.2
921
Tumor
-0.2
672
Normal
-0.2
857
Tumor
-0.2
553
Tumor
-0.2
161
Tumor
-0.2
967
Tumor
-0.2
386
Normal
-0.3
944
Normal
-0.3
722
Normal
-0.3
953
Tumor
-0.3
737
Tumor
-0.3
723
Tumor
-0.3
221
Tumor
-0.3
524
Normal
-0.3
231
Tumor
-0.3
528
Normal
-0.3
227
Tumor
-0.3
498
Normal
-0.3
786
Normal
-0.3
1013
Tumor
-0.3
937
Tumor
-0.3
618
Normal
-0.3
527
Tumor
-0.3
366
Normal
-0.3
525
Tumor
-0.3
716
Normal
-0.3
546
Normal
-0.3
213
Tumor
-0.3
277
Tumor
-0.4
963
Tumor
-0.4
975
Tumor
-0.4
698
Normal
-0.4
342
Normal
-0.4
368
Normal
-0.4
817
Tumor
-0.4
271
Tumor
-0.4
447
Tumor
-0.4
951
Tumor
-0.4
297
Tumor
-0.4
285
Tumor
-0.5
956
Normal
-0.5
641
Tumor
-0.5
433
Tumor
-0.5
492
Normal
-0.5
1044
Normal
-0.5
1022
Normal
-0.5
976
Normal
-0.5
696
Normal
-0.5
721
Tumor
-0.5
331
Tumor
-0.5
713
Tumor
-0.6
493
Tumor
-0.6
344
Normal
-0.6
536
Normal
-0.6
467
Tumor
-0.6
813
Tumor
-0.6
395
Tumor
-0.6
785
Tumor
-0.6
425
Tumor
-0.6
497
Tumor
-0.6
744
Normal
-0.7
881
Tumor
-0.7
375
Tumor
-0.7
671
Tumor
-0.7
943
Tumor
-0.7
877
Tumor
-0.7
343
Tumor
-0.7
715
Tumor
-0.7
488
Normal
-0.7
383
Tumor
-0.7
131
Tumor
-0.8
814
Normal
-0.8
697
Tumor
-0.9
535
Tumor
-0.9
695
Tumor
-0.9
311
Tumor
-1.1
545
Tumor
-1.1
917
Tumor
-1.1
413
Tumor
-1.2
351
Tumor
-1.2
983
Tumor
-1.3
661
Tumor
-1.3
965
Tumor
-1.4
724
Normal
-1.5
283
Tumor
-1.5
815
Tumor
-1.5
385
Tumor
-1.5
367
Tumor
-1.6
211
Tumor
-1.6
743
Tumor
-1.7
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
