We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMPD1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
39.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
141.2
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
139.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
93.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
93.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
92.9
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
92.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
86.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
86.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
81.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
81.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
80.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
77.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
76.5
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
76.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
75.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
75.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
74.5
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
73.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
70.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
70.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
70.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
70.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
69.9
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
69.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
69.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
69.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
68.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
68.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
65.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
65.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
65.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
64.7
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
64.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
63.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
63.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
63.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
62.5
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
62.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
61.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
61.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
61.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
61.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
60.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
60.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
59.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
59.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
59.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
59.1
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
58.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
57.7
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
57.5
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
57.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
57.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
57.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
56.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
56.3
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
56.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
55.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
55.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
55.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
55.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
55.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
54.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
54.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
54.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
54.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
54.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
54.0
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
53.9
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
53.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
53.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
53.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
53.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
53.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
52.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
52.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
51.8
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
51.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
50.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
49.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
49.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
49.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
48.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
48.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
48.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
48.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
48.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
47.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
47.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
47.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
47.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
47.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
47.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
46.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
46.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
46.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
46.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
46.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
46.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
46.4
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
46.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
46.2
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
45.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
45.7
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
45.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
45.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
45.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
45.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
45.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
45.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
45.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
45.0
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
44.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
44.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
44.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
44.6
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
44.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
44.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
44.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
44.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
44.3
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
44.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
44.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
43.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
43.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
43.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
43.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
43.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
43.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
43.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
43.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
43.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
42.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
42.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
42.8
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
42.6
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
42.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
42.4
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
42.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
41.9
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
41.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
41.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
41.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
40.9
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
40.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
40.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
40.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
40.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
40.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
40.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
40.2
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
40.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
40.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
39.8
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
39.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
39.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
39.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
39.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
39.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
39.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
39.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
39.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
38.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
38.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
38.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
38.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
38.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
38.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
38.1
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
38.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
37.9
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
37.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
37.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
37.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
37.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
37.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
37.3
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
37.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
37.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
36.9
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
36.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
36.8
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
36.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
36.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
36.4
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
36.0
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
36.0
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
35.9
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
35.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
35.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
35.9
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
35.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
35.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
35.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
35.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
35.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
35.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
34.9
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
34.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
34.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
34.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
34.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
34.4
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
34.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
34.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
34.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
33.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
33.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
33.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
33.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
33.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
33.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
33.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
32.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
32.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
32.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
32.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
32.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
32.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
32.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
32.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
32.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
32.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
32.1
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
32.1
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
32.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
31.9
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
31.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
31.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
31.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
31.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
31.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
30.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
30.8
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
30.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
30.6
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
30.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
30.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
30.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
30.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
30.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
30.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
30.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
29.9
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
29.7
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
29.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
29.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
29.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
29.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
29.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
29.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
28.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
28.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
28.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
28.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
28.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
28.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
28.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
28.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
28.4
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
28.4
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
28.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
28.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
28.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
28.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
28.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
27.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
27.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
27.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
27.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
27.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
27.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
27.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
27.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
27.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
26.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
26.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
26.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
26.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
26.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
26.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
26.5
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
26.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
26.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
26.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
25.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
25.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
25.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
25.5
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
25.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
25.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
25.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
25.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
25.2
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
25.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
25.1
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
24.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
24.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
24.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
24.0
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
24.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
23.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
23.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
23.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
23.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
23.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
23.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
22.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
22.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
22.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
22.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
22.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
22.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
22.4
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
22.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
22.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
21.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
21.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
21.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
21.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
21.7
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
21.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
21.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
21.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
20.8
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
20.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
20.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
20.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
20.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
20.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
19.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
19.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
19.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
19.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
19.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
19.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
18.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
18.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
18.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
18.3
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
17.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
17.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
17.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
17.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
16.9
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
16.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
15.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
15.4
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
15.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
15.1
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
14.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
14.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
13.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
13.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
12.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
12.4
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
11.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
9.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
8.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
7.6
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
7.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMPD1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.6
Number of samples
231
Samples
Sample
Description
TPM
DO45179
0 years, female, NA, stage:2, alive, 600 days
58.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
52.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
48.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
46.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
44.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
39.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
38.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
38.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
38.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
38.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
38.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
37.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
36.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
36.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
36.4
DO50774
0 years, female, NA, stage:2, alive, 720 days
36.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
35.6
DO45275
0 years, male, NA, stage:3, dead, 10 days
35.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
35.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
34.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
34.4
DO45191
0 years, female, NA, stage:2, alive, 1200 days
34.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
34.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
33.5
DO45185
0 years, male, NA, stage:2, alive, 600 days
33.4
DO23532
0 years, female, NA, stage:1, alive, 960 days
33.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
32.1
DO50776
0 years, male, NA, stage:1, alive, 690 days
31.6
DO45289
0 years, female, NA, stage:3, alive, 360 days
31.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
31.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
31.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
31.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
31.1
DO45159
0 years, male, NA, stage:3, alive, 1470 days
30.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
30.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
30.7
DO45255
0 years, male, NA, stage:3, alive, 720 days
30.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
30.3
DO45303
0 years, female, NA, stage:3, alive, 990 days
30.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
30.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
30.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
30.1
DO48704
0 years, female, NA, stage:3, alive, 750 days
30.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
29.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
29.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
29.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
28.8
DO227643
0 years, male, NA, stage:2, alive, 1260 days
28.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
28.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
28.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
27.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
27.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
27.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
27.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
27.6
DO45139
0 years, male, NA, stage:3, alive, 1320 days
27.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
27.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
26.6
DO45149
0 years, female, NA, stage:2, alive, 1260 days
26.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
26.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
26.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
26.0
DO48725
0 years, male, NA, stage:1, alive, 780 days
26.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
25.7
DO45195
0 years, male, NA, stage:1, alive, 390 days
25.7
DO45181
0 years, female, NA, stage:2, alive, 1200 days
25.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
25.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
25.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
25.6
DO48761
0 years, male, NA, stage:2, alive, 870 days
25.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
24.9
DO45173
0 years, male, NA, stage:3, alive, 1170 days
24.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
24.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
24.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
24.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
24.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
24.3
DO23518
0 years, male, NA, stage:2, alive, 1320 days
24.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
24.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
24.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
24.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
23.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
23.8
DO23525
0 years, male, NA, stage:4, alive, 1050 days
23.7
DO48743
0 years, female, NA, stage:2, alive, 570 days
23.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
23.5
DO45233
0 years, male, NA, stage:3, alive, 900 days
23.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
23.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
23.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
23.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
23.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
23.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
22.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
22.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
22.6
DO45285
0 years, male, NA, stage:3, alive, 480 days
22.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
22.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
22.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
22.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
22.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
22.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
21.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
21.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
21.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
21.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
21.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
21.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
21.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
21.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
20.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
20.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
20.5
DO45161
0 years, male, NA, stage:2, dead, 540 days
20.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
20.4
DO23541
0 years, male, NA, stage:2, alive, 930 days
20.1
DO23510
0 years, female, NA, stage:2, alive, 870 days
20.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
20.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
19.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
19.8
DO48693
0 years, male, NA, stage:2, alive, 900 days
19.7
DO45215
0 years, male, NA, stage:2, alive, 1170 days
19.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
19.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
19.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
19.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
19.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
19.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
19.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
19.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
18.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
18.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
18.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
18.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
18.6
DO48737
0 years, male, NA, stage:1, alive, 720 days
18.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
18.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
18.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
18.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
18.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
18.3
DO45241
0 years, male, NA, stage:1, alive, 1080 days
18.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
18.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
18.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
17.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
17.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
17.6
DO50778
0 years, male, NA, stage:4, alive, 630 days
17.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
17.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
17.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
17.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
17.2
DO45243
0 years, female, NA, stage:3, alive, 930 days
17.1
DO45129
0 years, male, NA, stage:3, alive, 1470 days
17.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
17.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
17.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
17.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
16.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
16.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
16.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
16.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
16.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
16.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
16.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
16.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
16.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
16.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
16.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
16.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
16.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
16.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
16.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
16.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
16.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
15.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
15.8
DO48677
0 years, male, NA, stage:3, alive, 1140 days
15.7
DO48723
0 years, male, NA, stage:1, alive, 600 days
15.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
15.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
15.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
14.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
14.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
14.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
14.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
14.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
14.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
14.1
DO48672
0 years, male, NA, stage:2, alive, 450 days
13.9
DO45281
0 years, male, NA, stage:4, alive, 750 days
13.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
13.7
DO45251
0 years, female, NA, stage:2, alive, 900 days
13.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
13.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
13.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
13.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
13.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
13.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
13.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
13.1
DO45091
0 years, male, NA, stage:2, dead, 1320 days
12.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
12.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
12.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
12.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
12.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
12.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
12.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
11.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
11.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
11.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
11.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
11.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
10.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
10.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
10.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
10.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
10.3
DO23521
0 years, male, NA, stage:3, alive, 1110 days
10.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
10.1
DO50785
0 years, male, NA, stage:4, dead, 90 days
10.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
9.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
9.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
9.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
9.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
9.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
8.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
8.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
8.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
8.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
8.3
DO45211
0 years, male, NA, stage:3, alive, 240 days
7.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
7.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
5.4
DO45145
0 years, male, NA, stage:3, dead, 60 days
5.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
1.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
451
Tumor
1.3
227
Tumor
0.8
636
Normal
0.8
1043
Tumor
0.8
257
Tumor
0.7
1027
Tumor
0.7
617
Tumor
0.7
558
Normal
0.6
113
Tumor
0.6
628
Normal
0.6
258
Normal
0.6
981
Tumor
0.6
553
Tumor
0.6
214
Normal
0.6
147
Tumor
0.6
635
Tumor
0.6
923
Tumor
0.6
222
Normal
0.5
218
Normal
0.5
722
Normal
0.5
642
Normal
0.5
327
Tumor
0.5
755
Tumor
0.5
641
Tumor
0.5
863
Tumor
0.5
616
Normal
0.5
414
Normal
0.5
426
Normal
0.5
517
Tumor
0.5
533
Tumor
0.5
937
Tumor
0.5
538
Normal
0.5
171
Tumor
0.5
452
Normal
0.5
463
Tumor
0.4
232
Normal
0.4
188
Normal
0.4
128
Normal
0.4
618
Normal
0.4
187
Tumor
0.4
627
Tumor
0.4
272
Normal
0.4
944
Normal
0.4
114
Normal
0.4
224
Normal
0.4
1044
Normal
0.4
728
Normal
0.4
568
Normal
0.4
137
Tumor
0.4
172
Normal
0.3
358
Normal
0.3
468
Normal
0.3
395
Tumor
0.3
268
Normal
0.3
954
Normal
0.3
196
Normal
0.3
574
Normal
0.3
737
Tumor
0.3
443
Tumor
0.3
1045
Tumor
0.3
271
Tumor
0.3
564
Normal
0.3
368
Normal
0.3
1028
Normal
0.3
444
Normal
0.3
195
Tumor
0.3
723
Tumor
0.3
162
Normal
0.3
777
Tumor
0.3
342
Normal
0.3
878
Normal
0.3
223
Tumor
0.3
925
Tumor
0.3
912
Normal
0.3
123
Tumor
0.3
132
Normal
0.3
466
Normal
0.3
545
Tumor
0.3
142
Normal
0.3
286
Normal
0.3
186
Normal
0.3
615
Tumor
0.3
434
Normal
0.3
713
Tumor
0.3
422
Normal
0.3
924
Normal
0.3
384
Normal
0.2
191
Tumor
0.2
436
Normal
0.2
514
Normal
0.2
425
Tumor
0.2
743
Tumor
0.2
394
Normal
0.2
686
Normal
0.2
526
Normal
0.2
138
Normal
0.2
396
Normal
0.2
344
Normal
0.2
421
Tumor
0.2
217
Tumor
0.2
356
Normal
0.2
388
Normal
0.2
477
Tumor
0.2
698
Normal
0.2
148
Normal
0.2
136
Normal
0.2
858
Normal
0.2
563
Tumor
0.2
277
Tumor
0.2
284
Normal
0.2
464
Normal
0.2
435
Tumor
0.2
141
Tumor
0.2
314
Normal
0.2
262
Normal
0.2
572
Normal
0.2
918
Normal
0.2
474
Normal
0.2
864
Normal
0.2
353
Tumor
0.2
916
Normal
0.2
126
Normal
0.2
778
Normal
0.2
112
Tumor
0.2
745
Tumor
0.2
851
Tumor
0.2
124
Normal
0.2
515
Tumor
0.2
161
Tumor
0.2
331
Tumor
0.2
471
Tumor
0.2
432
Normal
0.2
984
Normal
0.2
392
Normal
0.2
332
Normal
0.2
746
Normal
0.2
145
Tumor
0.2
921
Tumor
0.1
424
Normal
0.1
362
Normal
0.1
528
Normal
0.1
297
Tumor
0.1
428
Normal
0.1
352
Normal
0.1
738
Normal
0.1
363
Tumor
0.1
744
Normal
0.1
724
Normal
0.1
557
Tumor
0.1
982
Normal
0.1
915
Tumor
0.1
423
Tumor
0.1
696
Normal
0.1
852
Normal
0.1
446
Normal
0.1
817
Tumor
0.1
498
Normal
0.1
127
Tumor
0.1
386
Normal
0.1
285
Tumor
0.1
111
Normal
0.1
354
Normal
0.1
516
Normal
0.1
1021
Tumor
0.1
824
Normal
0.1
956
Normal
0.1
914
Normal
0.1
525
Tumor
0.1
1046
Normal
0.1
518
Normal
0.1
185
Tumor
0.1
461
Tumor
0.1
884
Normal
0.1
341
Tumor
0.1
527
Tumor
0.0
727
Tumor
0.0
1022
Normal
0.0
393
Tumor
0.0
228
Normal
0.0
695
Tumor
0.0
1031
Tumor
0.0
1032
Normal
0.0
1026
Normal
0.0
911
Tumor
0.0
467
Tumor
0.0
482
Normal
0.0
278
Normal
0.0
492
Normal
0.0
481
Tumor
0.0
524
Normal
0.0
328
Normal
0.0
554
Normal
0.0
938
Normal
0.0
313
Tumor
0.0
513
Tumor
0.0
966
Normal
0.0
546
Normal
0.0
343
Tumor
0.0
456
Normal
0.0
913
Tumor
0.0
465
Tumor
0.0
361
Tumor
0.0
978
Normal
0.0
955
Tumor
0.0
742
Normal
0.0
818
Normal
0.0
922
Normal
0.0
445
Tumor
0.0
721
Tumor
0.0
478
Normal
0.0
212
Normal
0.0
484
Normal
0.0
814
Normal
0.0
536
Normal
0.0
1014
Normal
0.0
261
Tumor
0.0
487
Tumor
0.0
494
Normal
0.0
857
Tumor
0.0
146
Normal
0.0
868
Normal
0.0
952
Normal
0.0
785
Tumor
0.0
462
Normal
0.0
192
Normal
0.0
364
Normal
0.0
968
Normal
0.0
786
Normal
-0.1
672
Normal
-0.1
131
Tumor
-0.1
1016
Normal
-0.1
756
Normal
-0.1
741
Tumor
-0.1
366
Normal
-0.1
882
Normal
-0.1
865
Tumor
-0.1
415
Tumor
-0.1
1041
Tumor
-0.1
448
Normal
-0.1
917
Tumor
-0.1
312
Normal
-0.1
926
Normal
-0.1
387
Tumor
-0.1
573
Tumor
-0.1
427
Tumor
-0.1
523
Tumor
-0.1
433
Tumor
-0.1
416
Normal
-0.1
376
Normal
-0.1
648
Normal
-0.1
311
Tumor
-0.1
411
Tumor
-0.1
472
Normal
-0.1
537
Tumor
-0.1
221
Tumor
-0.1
298
Normal
-0.1
213
Tumor
-0.1
267
Tumor
-0.1
1025
Tumor
-0.1
862
Normal
-0.1
816
Normal
-0.1
455
Tumor
-0.1
571
Tumor
-0.1
714
Normal
-0.2
964
Normal
-0.2
874
Normal
-0.2
958
Normal
-0.2
881
Tumor
-0.2
975
Tumor
-0.2
976
Normal
-0.2
815
Tumor
-0.2
125
Tumor
-0.2
861
Tumor
-0.2
866
Normal
-0.2
488
Normal
-0.2
447
Tumor
-0.2
534
Normal
-0.2
383
Tumor
-0.2
867
Tumor
-0.2
883
Tumor
-0.2
357
Tumor
-0.2
391
Tumor
-0.2
412
Normal
-0.2
1042
Normal
-0.2
967
Tumor
-0.2
951
Tumor
-0.2
977
Tumor
-0.3
135
Tumor
-0.3
1015
Tumor
-0.3
473
Tumor
-0.3
873
Tumor
-0.3
697
Tumor
-0.3
716
Normal
-0.3
943
Tumor
-0.3
715
Tumor
-0.3
665
Tumor
-0.3
823
Tumor
-0.3
431
Tumor
-0.3
231
Tumor
-0.3
953
Tumor
-0.3
493
Tumor
-0.3
813
Tumor
-0.4
664
Normal
-0.4
666
Normal
-0.4
662
Normal
-0.4
283
Tumor
-0.4
491
Tumor
-0.4
1013
Tumor
-0.4
535
Tumor
-0.4
567
Tumor
-0.4
957
Tumor
-0.4
497
Tumor
-0.5
685
Tumor
-0.5
983
Tumor
-0.5
365
Tumor
-0.5
963
Tumor
-0.5
647
Tumor
-0.5
413
Tumor
-0.5
355
Tumor
-0.5
671
Tumor
-0.5
483
Tumor
-0.6
375
Tumor
-0.6
211
Tumor
-0.6
877
Tumor
-0.6
663
Tumor
-0.6
367
Tumor
-0.7
965
Tumor
-0.7
385
Tumor
-0.7
661
Tumor
-0.7
351
Tumor
-0.8
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.