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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LARP6 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
88.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
79.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
61.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
45.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
39.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
24.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
24.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
23.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
19.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
17.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
16.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
16.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
14.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
12.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
12.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
12.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
10.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
10.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
10.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
9.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
9.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
9.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
9.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
8.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
7.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
7.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
6.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
6.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
6.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
6.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
6.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
6.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
5.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
5.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
5.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
5.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
4.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
4.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
4.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
4.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
4.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
4.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
4.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
3.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
3.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
3.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
2.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
2.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
2.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
2.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
2.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
2.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
2.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
1.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
1.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
1.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
1.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
1.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
1.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LARP6 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
78.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
62.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
58.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
58.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
56.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
53.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
41.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
41.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
40.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
40.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
40.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
39.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
38.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
38.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
37.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
36.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
36.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
36.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
35.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
34.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
34.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
34.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
34.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
33.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
33.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
31.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
31.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
30.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
30.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
29.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
29.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
29.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
29.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
29.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
28.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
28.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
28.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
27.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
27.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
27.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
27.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
27.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
27.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
27.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
27.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
27.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
26.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
26.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
26.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
26.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
26.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
26.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
25.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
25.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
25.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
25.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
25.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
25.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
25.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
24.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
24.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
24.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
24.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
24.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
23.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
23.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
23.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
23.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
23.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
23.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
23.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
23.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
23.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
23.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
22.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
22.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
22.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
22.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
22.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
22.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
22.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
22.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
22.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
22.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
21.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
21.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
21.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
21.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
21.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
21.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
21.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
21.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
21.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
21.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
21.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
21.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
21.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
21.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
21.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
21.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
21.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
21.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
21.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
21.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
21.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
20.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
20.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
20.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
20.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
20.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
20.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
20.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
20.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
20.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
19.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
19.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
19.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
19.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
19.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
19.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
19.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
19.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
19.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
19.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
19.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
19.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
19.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
19.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
19.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
19.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
19.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
19.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
19.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
19.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
19.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
19.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
19.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
18.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
18.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
18.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
18.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
18.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
18.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
18.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
18.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
18.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
18.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
18.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
18.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
18.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
18.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
18.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
18.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
18.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
17.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
17.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
17.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
17.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
17.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
17.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
17.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
17.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
17.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
17.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
17.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
17.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
17.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
17.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
17.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
17.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
17.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
17.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
17.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
17.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
17.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
17.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
17.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
17.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
17.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
17.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
17.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
17.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
16.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
16.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
16.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
16.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
16.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
16.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
16.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
16.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
16.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
16.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
16.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
16.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
16.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
16.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
16.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
16.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
16.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
16.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
16.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
16.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
15.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
15.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
15.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
15.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
15.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
15.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
15.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
15.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
15.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
15.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
15.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
15.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
15.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
15.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
15.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
15.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
15.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
15.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
15.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
15.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
15.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
15.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
15.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
15.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
15.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
15.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
15.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
15.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
15.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
15.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
15.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
15.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
15.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
15.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
15.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
14.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
14.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
14.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
14.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
14.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
14.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
14.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
14.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
14.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
14.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
14.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
14.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
14.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
14.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
14.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
14.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
14.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
14.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
14.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
14.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
14.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
14.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
14.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
14.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
14.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
14.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
14.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
14.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
14.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
14.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
14.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
14.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
14.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
13.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
13.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
13.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
13.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
13.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
13.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
13.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
13.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
13.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
13.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
13.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
13.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
13.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
13.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
13.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
13.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
13.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
13.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
13.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
13.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
13.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
13.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
13.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
13.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
13.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
13.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
13.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
13.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
13.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
13.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
13.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
13.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
12.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
12.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
12.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
12.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
12.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
12.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
12.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
12.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
12.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
12.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
12.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
12.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
12.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
12.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
12.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
12.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
12.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
12.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
12.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
12.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
12.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
12.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
12.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
12.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
11.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
11.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
11.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
11.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
11.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
11.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
11.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
11.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
11.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
11.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
11.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
11.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
11.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
11.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
11.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
11.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
11.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
11.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
11.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
11.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
11.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
11.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
11.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
11.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
11.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
11.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
11.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
10.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
10.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
10.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
10.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
10.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
10.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
10.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
10.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
10.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
10.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
10.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
10.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
10.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
10.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
10.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
10.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
10.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
10.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
10.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
10.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
10.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
10.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
10.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
10.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
10.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
10.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
10.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
10.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
10.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
10.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
10.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
10.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
9.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
9.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
9.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
9.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
9.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
9.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
9.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
9.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
9.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
9.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
9.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
9.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
9.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
9.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
9.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
9.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
9.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
9.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
9.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
9.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
9.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
9.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
9.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
9.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
9.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
8.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
8.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
8.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
8.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
8.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
8.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
8.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
8.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
8.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
8.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
8.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
8.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
8.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
8.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
8.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
8.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
8.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
8.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
8.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
8.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
8.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
8.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
7.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
7.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
7.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
7.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
7.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
7.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
7.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
7.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
7.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
7.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
7.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
7.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
7.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
7.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
7.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
7.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
7.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
7.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
7.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
6.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
6.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
6.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
6.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
6.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
6.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
6.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
6.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
6.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
6.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
6.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
6.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
6.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
6.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
6.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
6.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
5.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
5.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
5.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
5.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
5.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
5.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
5.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
5.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
5.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
5.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
5.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
5.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
4.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
4.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
4.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
4.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
4.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
4.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
4.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
4.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
4.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
4.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
3.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
3.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
3.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
3.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
3.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
3.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
3.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
3.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
2.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
2.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
2.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
2.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
1.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LARP6 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
64.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
58.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
44.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
40.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
36.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
35.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
33.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
31.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
31.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
31.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
30.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
30.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
29.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
29.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
29.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
28.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
28.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
28.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
26.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
25.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
25.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
25.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
24.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
24.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
24.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
24.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
23.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
23.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
23.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
23.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
23.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
22.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
22.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
22.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
22.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
21.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
21.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
21.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
20.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
20.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
20.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
19.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
19.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
19.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
19.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
19.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
19.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
18.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
18.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
17.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
17.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
17.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
17.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
17.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
17.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
17.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
17.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
16.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
16.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
16.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
16.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
15.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
15.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
15.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
15.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
15.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
14.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
14.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
14.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
14.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
13.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
13.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
13.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
12.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
12.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
12.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
12.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
12.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
12.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
12.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
11.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
11.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
11.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
10.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
10.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
10.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
9.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
9.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
9.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
8.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
8.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
8.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
6.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
6.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
6.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
5.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
5.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LARP6 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
66.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
63.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
62.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
60.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
58.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
57.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
55.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
54.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
51.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
46.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
46.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
46.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
45.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
44.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
43.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
42.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
42.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
42.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
41.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
39.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
38.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
38.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
38.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
37.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
36.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
36.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
36.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
36.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
35.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
35.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
35.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
34.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
34.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
34.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
33.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
33.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
33.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
32.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
32.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
32.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
31.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
31.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
31.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
31.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
31.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
30.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
30.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
30.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
30.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
30.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
30.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
29.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
29.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
28.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
28.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
28.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
27.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
27.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
27.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
27.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
27.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
26.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
26.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
26.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
26.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
26.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
26.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
25.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
25.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
25.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
25.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
25.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
25.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
25.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
24.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
24.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
24.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
24.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
24.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
24.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
23.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
23.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
23.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
23.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
23.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
23.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
22.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
22.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
22.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
22.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
22.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
22.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
22.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
22.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
22.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
22.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
21.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
21.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
21.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
21.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
21.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
21.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
21.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
21.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
21.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
20.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
19.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
19.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
19.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
19.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
19.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
19.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
19.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
19.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
19.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
19.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
19.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
18.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
18.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
18.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
18.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
18.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
18.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
18.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
18.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
18.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
18.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
18.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
17.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
17.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
17.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
17.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
17.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
17.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
17.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
17.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
17.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
17.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
17.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
17.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
17.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
17.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
17.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
17.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
16.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
16.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
16.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
16.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
16.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
16.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
16.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
16.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
16.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
16.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
16.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
16.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
16.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
16.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
15.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
15.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
15.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
15.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
15.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
15.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
15.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
15.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
15.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
14.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
14.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
14.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
14.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
14.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
14.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
14.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
14.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
14.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
14.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
14.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
14.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
13.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
13.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
13.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
13.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
13.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
13.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
13.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
13.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
13.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
13.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
13.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
13.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
13.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
13.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
12.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
12.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
12.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
12.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
12.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
12.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
12.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
12.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
12.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
12.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
12.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
12.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
12.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
12.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
11.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
11.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
11.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
11.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
11.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
11.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
11.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
11.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
11.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
11.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
10.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
10.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
10.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
10.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
10.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
10.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
10.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
10.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
10.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
10.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
9.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
9.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
9.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
9.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
9.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
9.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
9.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
8.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
8.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
8.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
8.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
8.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
8.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
8.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
8.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
8.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
8.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
8.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
7.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
7.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
7.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
7.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
7.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
7.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
7.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
6.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
6.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
6.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
6.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
6.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
6.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
6.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
5.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
5.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
5.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
5.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
5.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
4.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
4.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
3.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
3.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
3.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
3.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
3.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
2.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
2.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
2.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
2.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
1.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
1.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088970003
Tumor
0.9
CPT0063320003
Tumor
0.8
CPT0000640003
Tumor
0.8
CPT0092290003
Tumor
0.8
CPT0081880003
Tumor
0.6
CPT0089460004
Tumor
0.5
CPT0088630003
Tumor
0.5
CPT0026420001
Normal
0.4
CPT0064370003
Tumor
0.4
CPT0066430001
Normal
0.3
CPT0092190003
Normal
0.3
CPT0020020001
Normal
0.3
CPT0014160003
Tumor
0.3
CPT0011410003
Tumor
0.2
CPT0088780001
Normal
0.2
CPT0063630003
Tumor
0.2
CPT0006530001
Normal
0.2
CPT0010160003
Tumor
0.2
CPT0088640003
Normal
0.2
CPT0025170003
Tumor
0.2
CPT0025060001
Normal
0.2
CPT0010170001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0001230001
Normal
0.1
CPT0078930003
Tumor
0.1
CPT0001180009
Tumor
0.1
CPT0088710001
Normal
0.1
CPT0065690003
Tumor
0.1
CPT0071150004
Tumor
0.0
CPT0078940001
Normal
0.0
CPT0088760003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0014130001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0064400001
Normal
-0.1
CPT0065930003
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0081990003
Tumor
-0.1
CPT0001220008
Tumor
-0.1
CPT0026410003
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0001190001
Normal
-0.2
CPT0025350003
Tumor
-0.2
CPT0092160003
Tumor
-0.2
CPT0025050003
Tumor
-0.2
CPT0086890003
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0015910003
Tumor
-0.2
CPT0002350011
Tumor
-0.3
CPT0088690003
Tumor
-0.3
CPT0086870003
Tumor
-0.3
CPT0086950003
Tumor
-0.3
CPT0082010001
Normal
-0.4
CPT0006440003
Tumor
-0.4
CPT0025290003
Tumor
-0.4
CPT0066470004
Tumor
-0.6
CPT0025110003
Tumor
-0.6
CPT0019990003
Tumor
-0.7
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0001550001
Normal
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0007470001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0078670001
Normal
N/A
CPT0007320003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0079510001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0075170001
Normal
N/A
CPT0065870003
Tumor
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0075130003
Tumor
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
