We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMCO4 is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
32.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
186.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
132.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
89.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
88.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
75.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
64.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
60.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
59.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
57.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
53.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
48.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
47.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
45.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
44.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
44.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
42.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
41.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
40.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
39.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
38.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
38.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
36.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
35.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
32.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
31.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
31.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
29.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
28.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
27.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
26.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
25.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
25.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
24.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
24.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
24.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
23.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
22.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
21.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
20.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
20.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
20.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
17.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
16.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
14.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
14.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
13.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
13.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
11.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
11.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
11.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
10.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
10.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
10.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
9.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
7.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
7.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
6.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
6.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
6.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
6.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
4.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
3.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
3.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMCO4 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
49.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
235.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
233.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
181.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
177.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
161.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
148.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
145.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
143.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
143.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
141.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
139.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
127.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
127.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
126.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
126.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
125.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
125.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
122.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
120.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
119.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
116.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
116.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
114.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
113.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
112.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
112.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
110.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
109.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
107.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
105.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
104.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
104.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
103.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
99.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
98.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
97.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
97.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
96.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
95.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
94.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
93.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
92.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
92.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
91.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
89.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
89.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
89.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
89.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
86.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
85.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
85.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
82.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
82.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
82.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
81.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
80.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
80.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
79.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
79.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
79.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
78.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
78.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
78.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
77.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
77.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
77.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
77.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
76.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
76.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
75.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
75.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
74.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
74.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
74.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
74.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
73.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
73.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
73.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
72.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
72.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
72.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
72.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
72.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
71.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
71.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
71.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
70.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
70.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
69.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
69.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
69.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
69.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
68.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
68.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
68.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
68.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
68.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
68.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
66.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
66.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
66.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
66.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
65.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
65.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
65.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
65.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
65.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
64.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
64.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
64.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
64.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
64.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
63.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
63.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
62.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
62.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
62.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
62.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
62.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
62.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
62.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
61.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
61.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
61.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
61.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
60.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
60.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
60.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
60.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
60.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
60.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
60.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
60.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
59.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
59.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
59.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
59.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
59.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
58.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
58.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
58.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
57.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
57.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
57.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
57.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
57.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
56.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
56.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
56.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
56.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
56.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
55.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
55.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
55.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
55.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
55.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
54.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
54.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
54.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
54.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
54.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
54.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
54.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
53.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
53.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
53.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
53.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
53.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
53.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
53.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
53.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
53.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
53.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
53.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
52.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
52.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
52.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
52.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
52.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
52.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
52.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
51.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
51.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
51.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
51.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
51.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
51.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
51.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
50.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
50.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
50.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
50.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
49.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
49.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
49.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
49.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
49.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
49.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
48.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
48.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
48.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
48.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
48.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
48.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
47.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
47.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
47.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
47.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
47.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
47.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
47.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
47.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
47.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
47.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
46.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
46.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
46.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
46.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
46.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
46.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
46.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
46.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
45.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
45.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
45.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
45.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
45.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
45.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
45.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
45.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
45.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
45.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
45.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
44.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
44.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
44.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
44.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
44.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
44.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
44.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
44.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
44.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
44.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
43.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
43.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
43.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
43.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
43.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
43.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
43.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
43.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
43.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
43.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
43.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
42.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
42.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
42.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
42.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
42.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
42.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
42.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
42.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
42.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
42.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
42.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
42.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
42.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
42.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
42.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
42.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
42.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
42.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
41.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
41.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
41.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
41.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
41.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
41.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
41.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
41.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
41.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
40.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
40.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
40.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
40.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
40.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
40.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
40.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
39.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
39.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
39.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
39.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
39.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
39.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
39.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
39.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
39.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
39.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
39.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
39.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
38.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
38.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
38.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
38.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
38.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
38.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
38.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
38.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
38.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
38.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
38.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
38.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
37.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
37.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
37.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
37.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
37.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
37.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
37.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
37.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
37.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
37.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
36.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
36.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
36.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
36.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
36.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
36.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
36.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
36.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
36.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
36.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
35.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
35.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
35.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
35.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
35.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
35.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
35.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
35.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
35.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
35.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
35.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
35.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
35.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
34.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
34.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
34.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
34.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
34.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
34.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
34.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
34.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
34.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
34.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
34.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
34.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
33.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
33.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
33.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
33.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
33.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
33.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
33.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
33.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
33.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
33.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
33.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
33.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
32.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
32.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
32.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
32.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
32.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
32.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
32.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
32.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
32.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
31.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
31.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
31.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
31.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
31.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
31.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
31.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
31.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
31.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
31.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
30.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
30.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
30.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
30.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
30.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
30.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
30.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
29.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
29.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
29.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
29.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
29.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
29.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
29.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
29.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
29.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
29.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
29.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
28.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
28.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
28.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
28.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
28.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
28.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
28.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
28.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
28.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
28.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
27.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
27.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
27.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
27.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
27.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
27.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
27.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
27.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
27.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
27.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
27.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
27.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
26.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
26.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
26.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
26.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
26.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
26.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
26.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
26.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
26.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
26.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
26.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
25.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
25.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
25.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
25.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
25.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
25.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
25.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
24.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
24.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
24.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
24.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
24.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
24.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
24.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
24.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
24.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
23.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
23.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
23.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
23.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
23.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
22.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
22.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
22.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
22.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
22.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
22.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
22.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
21.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
21.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
21.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
21.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
20.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
20.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
20.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
20.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
20.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
20.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
20.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
19.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
19.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
18.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
18.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
18.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
18.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
18.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
18.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
18.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
18.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
17.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
17.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
17.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
17.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
17.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
17.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
16.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
16.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
16.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
15.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
15.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
15.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
15.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
15.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
14.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
14.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
13.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
13.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
13.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
12.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
11.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
11.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
11.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
11.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
8.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
8.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
8.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
7.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
7.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
4.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMCO4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
54.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
281.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
172.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
150.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
142.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
131.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
126.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
123.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
106.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
98.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
94.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
92.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
89.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
89.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
83.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
83.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
78.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
74.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
72.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
69.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
69.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
67.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
65.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
65.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
62.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
62.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
61.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
61.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
59.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
59.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
58.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
57.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
56.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
56.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
55.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
54.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
53.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
53.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
53.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
53.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
51.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
51.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
49.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
48.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
48.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
47.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
47.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
47.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
46.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
46.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
44.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
43.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
43.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
42.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
42.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
42.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
41.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
41.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
40.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
40.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
39.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
39.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
39.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
38.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
37.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
36.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
36.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
35.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
35.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
35.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
35.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
34.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
34.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
33.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
32.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
32.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
32.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
32.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
32.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
31.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
31.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
31.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
29.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
28.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
28.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
26.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
26.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
25.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
25.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
24.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
24.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
18.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
16.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
16.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
15.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
15.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
14.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
14.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
13.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMCO4 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
156.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
147.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
146.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
124.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
116.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
112.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
111.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
110.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
107.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
95.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
94.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
88.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
88.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
84.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
76.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
75.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
74.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
73.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
72.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
70.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
67.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
65.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
64.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
64.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
63.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
63.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
62.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
62.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
60.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
60.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
60.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
57.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
56.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
55.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
54.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
54.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
51.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
50.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
50.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
49.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
48.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
47.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
45.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
44.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
43.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
43.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
43.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
42.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
42.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
42.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
41.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
41.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
39.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
39.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
39.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
37.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
37.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
37.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
36.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
36.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
36.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
35.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
35.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
35.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
34.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
34.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
34.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
34.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
34.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
32.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
32.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
32.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
32.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
32.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
31.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
31.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
31.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
31.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
31.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
30.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
29.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
29.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
29.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
29.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
29.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
29.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
28.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
28.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
28.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
28.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
28.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
28.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
28.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
28.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
27.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
27.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
27.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
27.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
26.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
26.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
26.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
26.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
26.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
26.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
26.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
26.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
26.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
25.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
25.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
25.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
25.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
25.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
25.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
25.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
25.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
25.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
24.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
24.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
24.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
24.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
24.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
23.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
23.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
23.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
23.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
23.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
22.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
22.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
22.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
21.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
21.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
21.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
21.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
21.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
21.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
21.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
21.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
21.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
21.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
21.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
21.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
21.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
21.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
21.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
20.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
20.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
20.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
20.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
20.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
20.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
20.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
20.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
20.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
20.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
19.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
19.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
19.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
19.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
19.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
19.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
19.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
19.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
19.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
19.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
19.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
19.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
19.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
19.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
19.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
19.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
18.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
18.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
18.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
18.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
18.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
18.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
18.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
18.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
18.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
18.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
18.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
18.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
17.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
17.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
17.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
17.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
17.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
17.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
17.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
17.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
17.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
17.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
16.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
16.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
16.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
16.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
16.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
16.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
16.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
16.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
16.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
16.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
16.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
15.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
15.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
15.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
15.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
15.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
15.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
15.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
15.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
15.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
14.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
14.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
14.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
14.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
14.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
14.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
14.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
14.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
14.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
14.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
14.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
14.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
14.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
14.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
13.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
13.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
13.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
13.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
13.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
13.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
13.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
13.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
13.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
12.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
12.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
12.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
12.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
12.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
11.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
11.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
11.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
11.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
11.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
11.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
11.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
10.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
10.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
10.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
10.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
10.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
9.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
9.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
8.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
8.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
8.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
8.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
7.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
7.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
7.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
7.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
7.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
6.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
6.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
6.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
6.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
5.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
5.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
5.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
4.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
4.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
4.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
Show allShow less
RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
