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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FAM204A is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
42.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
25.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
25.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
24.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
23.5
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
23.3
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
23.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
23.2
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
22.4
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
21.4
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
21.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
21.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
20.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
19.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
18.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
18.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
18.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
18.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
18.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
18.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
18.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
17.9
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
17.8
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
17.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
17.6
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
17.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
17.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
17.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
17.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
17.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
17.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
16.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
16.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
16.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
16.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
16.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
15.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
15.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
15.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
15.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
15.6
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
15.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
15.4
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
15.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
15.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
15.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
15.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
15.1
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
15.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
14.9
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
14.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
14.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
14.8
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
14.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
14.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
14.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
14.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
14.5
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
14.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
14.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
14.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
14.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
14.3
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
14.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
14.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
14.2
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
14.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
14.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
14.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
14.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
14.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
13.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
13.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
13.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
13.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
13.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
13.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
13.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
13.7
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
13.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
13.7
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
13.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
13.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
13.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
13.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
13.5
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
13.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
13.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
13.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
13.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
13.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
13.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
13.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
13.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
13.1
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
13.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
13.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
13.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
12.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
12.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
12.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
12.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
12.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
12.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
12.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
12.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
12.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
12.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
12.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
12.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
12.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
12.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
12.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
12.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
12.3
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
12.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
12.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
12.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
12.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
11.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
11.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
11.8
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
11.8
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
11.8
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
11.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
11.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
11.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
11.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
11.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
11.7
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
11.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
11.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
11.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
11.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
11.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
11.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
11.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
11.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
11.4
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
11.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
11.3
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
11.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
11.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
11.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
11.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
11.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
11.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
11.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
11.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
10.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
10.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
10.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
10.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
10.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
10.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
10.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
10.8
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
10.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
10.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
10.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
10.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
10.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
10.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
10.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
10.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
10.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
10.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
10.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
10.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
10.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
10.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
10.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
10.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
10.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
10.3
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
10.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
10.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
10.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
10.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
10.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
10.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
10.1
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
10.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
10.0
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
10.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
10.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
10.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
9.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
9.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
9.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
9.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
9.9
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
9.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
9.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
9.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
9.7
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
9.7
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
9.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
9.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
9.6
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
9.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
9.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
9.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
9.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
9.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
9.4
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
9.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
9.4
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
9.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
9.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
9.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
9.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
9.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
9.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
9.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
9.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
9.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
8.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
8.9
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
8.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
8.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
8.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
8.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
8.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
8.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
8.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
8.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
8.6
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
8.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
8.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
8.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
8.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
8.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
8.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
8.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
8.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
8.4
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
8.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
8.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
8.4
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
8.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
8.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
8.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
8.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
8.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
8.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
8.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
8.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
8.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
8.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
8.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
8.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
8.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
8.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
8.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
7.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
7.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
7.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
7.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
7.8
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
7.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
7.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
7.7
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
7.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
7.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
7.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
7.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
7.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
7.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
7.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
7.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
7.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
7.5
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
7.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
7.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
7.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
7.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
7.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
7.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
7.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
7.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
7.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
7.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
7.3
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
7.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
7.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
7.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
7.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
7.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
7.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
7.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
7.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
7.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
7.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
6.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
6.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
6.9
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
6.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
6.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
6.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
6.6
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
6.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
6.5
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
6.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
6.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
6.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
6.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
6.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
6.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
6.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
6.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
6.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
6.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
6.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
6.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
6.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
6.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
5.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
5.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5.9
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
5.9
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
5.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
5.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
5.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
5.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
5.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
5.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
5.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
5.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
5.5
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
5.4
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
5.4
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
5.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
5.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
5.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
5.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
5.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
5.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
5.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
4.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
4.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
4.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
4.5
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
4.4
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
4.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
4.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
4.1
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
4.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
3.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
3.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
3.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
3.4
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
3.2
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
3.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
2.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
2.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2.2
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FAM204A is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.5
Number of samples
231
Samples
Sample
Description
TPM
DO45305
0 years, male, NA, stage:4, alive, 300 days
17.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
17.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
16.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
16.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
15.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
15.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
14.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
14.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
14.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
13.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
13.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
13.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
13.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
12.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
12.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
12.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
11.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
11.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
11.6
DO45092
0 years, male, NA, stage:4, dead, 1200 days
11.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
11.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
11.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
11.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
11.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
10.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
10.9
DO45119
0 years, male, NA, stage:3, dead, 510 days
10.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
10.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
10.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
10.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
10.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
10.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
10.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
10.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
10.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
10.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
10.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
10.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
9.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
9.8
DO45183
0 years, female, NA, stage:2, dead, 570 days
9.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
9.3
DO45221
0 years, female, NA, stage:4, dead, 390 days
9.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
9.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
9.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
9.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
9.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
9.1
DO45159
0 years, male, NA, stage:3, alive, 1470 days
9.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
9.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
9.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
8.9
DO45115
0 years, male, NA, stage:2, alive, 840 days
8.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
8.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
8.7
DO48723
0 years, male, NA, stage:1, alive, 600 days
8.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
8.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
8.7
DO45239
0 years, male, NA, stage:2, alive, 870 days
8.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
8.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
8.6
DO23512
0 years, male, NA, stage:1, alive, 1260 days
8.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
8.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
8.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
8.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
8.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
8.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
8.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
8.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
8.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
8.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
8.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
8.1
DO50776
0 years, male, NA, stage:1, alive, 690 days
8.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
8.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
8.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
8.0
DO48679
0 years, male, NA, stage:2, alive, 1200 days
7.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
7.9
DO45177
0 years, female, NA, stage:3, alive, 1260 days
7.9
DO23535
0 years, male, NA, stage:1, alive, 960 days
7.9
DO50855
0 years, male, NA, stage:2, alive, 570 days
7.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
7.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
7.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
7.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
7.7
DO50845
0 years, male, NA, stage:3, alive, 210 days
7.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
7.7
DO23516
0 years, male, NA, stage:3, dead, 20 days
7.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
7.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
7.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
7.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
7.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
7.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
7.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
7.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
7.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
7.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
7.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
7.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
7.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
7.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
7.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
7.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
7.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
7.3
DO45265
0 years, male, NA, stage:3, alive, 1020 days
7.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
7.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
7.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
7.3
DO45235
0 years, female, NA, stage:1, alive, 900 days
7.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
7.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
7.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
7.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
7.2
DO45257
0 years, male, NA, stage:3, alive, 810 days
7.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
7.2
DO45165
0 years, male, NA, stage:2, alive, 690 days
7.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
7.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
7.1
DO50811
0 years, male, NA, stage:1, alive, 450 days
7.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
7.1
DO23528
0 years, female, NA, stage:2, alive, 1020 days
7.0
DO23545
0 years, male, NA, stage:2, dead, 570 days
7.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
7.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
7.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
6.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
6.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
6.9
DO45281
0 years, male, NA, stage:4, alive, 750 days
6.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
6.9
DO50783
0 years, male, NA, stage:3, alive, 480 days
6.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
6.8
DO50857
0 years, male, NA, stage:2, alive, 210 days
6.8
DO45241
0 years, male, NA, stage:1, alive, 1080 days
6.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
6.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
6.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
6.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
6.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
6.7
DO23543
0 years, male, NA, stage:2, alive, 1020 days
6.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
6.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
6.6
DO45139
0 years, male, NA, stage:3, alive, 1320 days
6.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
6.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
6.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
6.5
DO45123
0 years, female, NA, stage:2, dead, 570 days
6.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
6.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
6.4
DO23538
0 years, male, NA, stage:2, alive, 450 days
6.4
DO45101
0 years, male, NA, stage:2, alive, 1680 days
6.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
6.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
6.3
DO50803
0 years, female, NA, stage:1, alive, 540 days
6.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
6.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
6.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
6.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
6.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
6.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
6.1
DO45091
0 years, male, NA, stage:2, dead, 1320 days
6.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
6.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
6.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
6.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
6.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
6.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
5.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
5.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
5.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
5.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
5.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
5.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
5.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
5.6
DO48715
0 years, female, NA, stage:2, dead, 690 days
5.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
5.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
5.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
5.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
5.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
5.4
DO45107
0 years, female, NA, stage:2, alive, 1710 days
5.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
5.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
5.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
5.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
5.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
5.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
5.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
5.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
5.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
5.2
DO23548
0 years, female, NA, stage:1, alive, 840 days
5.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
5.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
5.2
DO45207
0 years, male, NA, stage:1, alive, 1050 days
5.2
DO50787
0 years, male, NA, stage:3, alive, 480 days
5.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
5.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
5.0
DO45131
0 years, male, NA, stage:4, dead, 360 days
5.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
5.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
4.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
4.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
4.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
4.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
4.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
4.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
4.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
4.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
4.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
4.7
DO23544
0 years, male, NA, stage:2, alive, 960 days
4.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
4.7
DO50791
0 years, female, NA, stage:1, dead, 480 days
4.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
4.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
4.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
4.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
4.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
4.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
4.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
4.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
4.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
4.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
4.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
4.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
4.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
3.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
3.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
3.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
3.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
2.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
2.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
965
Tumor
1.3
743
Tumor
1.1
881
Tumor
1.0
132
Normal
1.0
967
Tumor
1.0
877
Tumor
1.0
957
Tumor
0.9
685
Tumor
0.9
138
Normal
0.8
883
Tumor
0.8
951
Tumor
0.8
661
Tumor
0.7
1025
Tumor
0.7
671
Tumor
0.7
953
Tumor
0.6
136
Normal
0.6
721
Tumor
0.6
741
Tumor
0.5
695
Tumor
0.5
737
Tumor
0.5
648
Normal
0.5
672
Normal
0.5
146
Normal
0.5
666
Normal
0.5
937
Tumor
0.5
211
Tumor
0.5
921
Tumor
0.5
142
Normal
0.5
665
Tumor
0.5
1021
Tumor
0.4
227
Tumor
0.4
647
Tumor
0.4
984
Normal
0.4
1031
Tumor
0.4
981
Tumor
0.4
145
Tumor
0.4
983
Tumor
0.4
662
Normal
0.3
977
Tumor
0.3
715
Tumor
0.3
975
Tumor
0.3
865
Tumor
0.3
923
Tumor
0.3
447
Tumor
0.3
1042
Normal
0.2
911
Tumor
0.2
978
Normal
0.2
664
Normal
0.2
863
Tumor
0.2
926
Normal
0.2
912
Normal
0.2
925
Tumor
0.2
882
Normal
0.2
861
Tumor
0.2
285
Tumor
0.2
922
Normal
0.2
1027
Tumor
0.2
917
Tumor
0.2
918
Normal
0.2
878
Normal
0.2
1016
Normal
0.1
137
Tumor
0.1
1046
Normal
0.1
954
Normal
0.1
1041
Tumor
0.1
943
Tumor
0.1
884
Normal
0.1
982
Normal
0.1
663
Tumor
0.1
866
Normal
0.1
913
Tumor
0.1
963
Tumor
0.1
223
Tumor
0.1
916
Normal
0.0
914
Normal
0.0
698
Normal
0.0
535
Tumor
0.0
864
Normal
0.0
1032
Normal
0.0
938
Normal
0.0
915
Tumor
0.0
924
Normal
0.0
697
Tumor
0.0
944
Normal
-0.1
212
Normal
-0.1
714
Normal
-0.1
958
Normal
-0.1
952
Normal
-0.1
1014
Normal
-0.1
716
Normal
-0.1
874
Normal
-0.1
868
Normal
-0.1
1022
Normal
-0.1
744
Normal
-0.1
727
Tumor
-0.1
966
Normal
-0.1
724
Normal
-0.1
1044
Normal
-0.1
738
Normal
-0.1
862
Normal
-0.1
867
Tumor
-0.1
1043
Tumor
-0.1
964
Normal
-0.1
1028
Normal
-0.1
141
Tumor
-0.1
224
Normal
-0.1
448
Normal
-0.2
696
Normal
-0.2
286
Normal
-0.2
536
Normal
-0.2
686
Normal
-0.2
1026
Normal
-0.2
728
Normal
-0.2
968
Normal
-0.2
956
Normal
-0.2
955
Tumor
-0.2
723
Tumor
-0.2
1045
Tumor
-0.3
713
Tumor
-0.3
742
Normal
-0.3
284
Normal
-0.3
873
Tumor
-0.3
1015
Tumor
-0.3
1013
Tumor
-0.4
283
Tumor
-0.4
228
Normal
-0.4
722
Normal
-0.4
976
Normal
-0.4
135
Tumor
-1.6
131
Tumor
-1.6
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
231
Tumor
N/A
352
Normal
N/A
473
Tumor
N/A
111
Normal
N/A
232
Normal
N/A
353
Tumor
N/A
474
Normal
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
483
Tumor
N/A
363
Tumor
N/A
484
Normal
N/A
364
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
487
Tumor
N/A
125
Tumor
N/A
367
Tumor
N/A
488
Normal
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
494
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
497
Tumor
N/A
498
Normal
N/A
257
Tumor
N/A
258
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
817
Tumor
N/A
818
Normal
N/A
261
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
387
Tumor
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
823
Tumor
N/A
824
Normal
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
278
Normal
N/A
161
Tumor
N/A
162
Normal
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
615
Tumor
N/A
857
Tumor
N/A
616
Normal
N/A
858
Normal
N/A
617
Tumor
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
745
Tumor
N/A
746
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
513
Tumor
N/A
755
Tumor
N/A
514
Normal
N/A
635
Tumor
N/A
756
Normal
N/A
515
Tumor
N/A
636
Normal
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
641
Tumor
N/A
642
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
527
Tumor
N/A
528
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
533
Tumor
N/A
413
Tumor
N/A
534
Normal
N/A
414
Normal
N/A
777
Tumor
N/A
415
Tumor
N/A
778
Normal
N/A
416
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
421
Tumor
N/A
422
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
545
Tumor
N/A
425
Tumor
N/A
546
Normal
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
431
Tumor
N/A
311
Tumor
N/A
432
Normal
N/A
553
Tumor
N/A
312
Normal
N/A
433
Tumor
N/A
554
Normal
N/A
313
Tumor
N/A
434
Normal
N/A
314
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
443
Tumor
N/A
564
Normal
N/A
444
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
567
Tumor
N/A
568
Normal
N/A
327
Tumor
N/A
328
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
331
Tumor
N/A
452
Normal
N/A
573
Tumor
N/A
332
Normal
N/A
574
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
342
Normal
N/A
463
Tumor
N/A
222
Normal
N/A
343
Tumor
N/A
464
Normal
N/A
344
Normal
N/A
465
Tumor
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
