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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
0.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
3.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
1.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
0.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
0.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
0.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
0.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
0.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
0.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
0.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
0.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC16A9 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
347.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
224.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
207.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
173.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
169.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
169.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
167.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
150.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
145.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
134.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
132.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
128.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
125.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
124.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
124.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
118.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
116.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
114.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
114.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
113.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
112.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
111.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
107.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
105.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
103.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
102.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
98.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
97.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
96.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
94.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
94.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
94.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
93.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
92.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
92.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
92.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
90.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
88.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
88.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
88.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
87.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
85.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
85.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
83.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
80.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
80.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
80.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
80.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
80.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
80.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
79.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
76.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
76.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
76.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
76.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
76.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
75.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
74.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
74.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
73.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
73.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
70.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
68.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
68.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
67.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
66.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
64.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
63.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
62.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
62.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
62.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
61.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
61.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
61.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
61.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
61.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
60.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
60.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
59.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
59.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
59.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
58.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
58.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
57.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
57.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
57.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
57.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
56.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
55.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
54.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
53.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
52.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
51.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
50.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
50.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
50.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
49.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
49.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
49.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
48.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
48.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
48.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
47.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
47.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
47.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
46.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
46.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
46.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
46.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
46.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
45.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
45.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
45.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
45.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
44.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
44.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
44.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
44.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
44.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
44.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
43.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
43.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
43.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
43.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
42.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
42.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
41.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
41.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
40.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
39.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
39.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
39.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
39.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
38.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
38.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
38.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
37.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
37.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
37.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
37.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
36.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
36.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
36.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
35.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
35.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
34.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
34.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
34.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
34.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
33.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
33.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
33.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
33.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
33.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
32.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
32.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
32.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
32.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
31.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
31.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
30.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
30.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
30.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
30.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
30.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
29.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
29.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
29.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
29.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
29.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
29.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
29.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
29.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
28.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
28.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
28.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
28.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
28.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
27.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
27.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
27.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
27.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
27.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
27.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
27.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
27.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
27.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
26.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
26.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
25.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
25.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
25.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
25.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
25.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
25.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
25.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
25.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
25.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
25.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
25.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
24.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
24.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
24.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
24.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
24.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
24.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
24.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
24.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
23.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
23.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
23.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
23.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
23.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
23.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
23.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
23.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
23.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
22.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
22.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
22.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
21.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
21.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
21.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
21.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
21.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
21.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
21.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
20.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
20.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
20.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
20.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
20.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
20.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
20.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
20.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
20.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
20.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
20.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
19.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
19.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
19.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
19.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
19.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
19.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
19.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
19.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
19.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
19.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
19.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
19.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
19.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
18.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
18.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
18.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
18.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
18.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
18.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
18.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
18.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
18.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
17.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
17.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
17.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
17.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
17.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
17.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
17.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
16.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
16.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
16.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
16.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
16.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
16.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
16.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
15.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
15.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
15.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
15.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
15.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
15.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
15.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
15.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
15.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
14.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
14.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
14.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
14.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
14.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
14.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
14.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
13.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
13.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
13.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
13.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
13.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
13.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
13.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
13.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
13.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
13.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
13.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
12.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
12.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
12.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
12.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
12.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
12.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
12.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
11.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
11.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
11.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
11.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
11.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
11.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
11.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
10.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
10.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
10.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
10.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
10.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
10.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
10.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
10.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
10.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
9.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
9.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
9.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
9.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
9.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
9.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
9.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
9.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
9.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
9.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
9.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
9.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
9.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
9.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
9.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
9.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
8.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
8.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
8.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
8.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
8.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
8.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
8.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
8.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
8.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
8.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
8.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
8.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
8.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
7.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
7.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
7.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
7.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
7.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
7.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
7.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
7.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
7.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
7.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
7.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
7.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
7.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
6.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
6.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
6.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
6.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
6.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
6.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
6.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
6.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
6.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
6.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
6.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
6.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
6.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
6.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
6.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
6.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
6.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
5.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
5.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
5.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
5.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
5.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
5.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
5.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
5.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
5.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
5.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
5.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
5.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
5.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
5.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
5.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
5.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
4.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
4.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
4.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
4.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
4.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
4.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
4.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
4.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
4.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
4.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
4.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
4.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
4.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
4.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
4.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
4.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
4.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
4.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
4.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
4.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
4.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
3.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
3.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
3.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
3.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
3.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
3.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
3.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
3.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
3.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
3.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
3.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
3.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
3.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
3.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
3.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
3.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
3.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
3.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
2.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
2.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
2.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
2.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
2.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
2.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
2.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
2.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
2.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
2.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
2.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
2.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
2.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
2.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
2.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
2.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
2.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
2.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
2.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
1.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
1.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
1.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
1.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
1.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
1.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
1.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
1.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
1.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
1.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
1.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
1.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
1.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
1.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
1.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
1.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
1.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
1.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
1.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
1.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
1.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
1.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
0.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
0.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
0.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
0.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
0.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
0.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
0.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
0.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
0.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
0.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
0.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
0.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
0.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
0.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
0.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
0.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
0.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
0.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
0.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
0.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
0.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
0.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
0.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC16A9 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
144.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
132.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
131.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
128.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
123.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
106.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
103.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
96.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
88.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
84.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
84.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
83.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
82.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
77.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
66.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
66.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
63.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
58.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
56.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
55.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
54.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
54.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
51.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
50.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
46.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
46.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
45.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
41.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
39.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
37.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
35.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
34.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
32.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
30.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
29.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
28.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
26.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
25.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
24.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
24.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
24.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
23.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
23.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
21.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
20.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
20.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
20.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
20.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
20.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
19.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
18.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
17.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
17.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
16.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
15.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
15.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
13.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
12.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
12.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
12.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
11.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
11.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
11.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
11.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
10.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
10.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
9.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
8.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
8.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
8.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
7.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
7.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
7.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
6.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
6.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
5.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
5.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
5.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
5.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
4.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
4.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
4.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
3.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
3.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
3.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
2.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
2.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
1.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
1.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
1.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
1.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
1.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
0.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
0.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
0.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
0.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
0.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
0.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
0.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC16A9 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
37.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
632.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
329.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
195.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
176.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
169.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
160.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
159.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
141.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
138.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
132.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
129.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
116.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
112.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
109.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
103.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
102.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
100.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
98.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
96.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
94.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
93.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
91.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
89.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
85.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
85.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
84.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
84.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
83.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
78.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
78.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
77.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
77.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
74.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
72.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
70.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
70.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
70.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
70.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
70.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
69.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
68.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
67.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
65.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
65.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
64.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
62.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
62.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
61.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
60.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
60.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
60.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
59.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
57.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
57.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
56.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
56.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
56.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
55.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
55.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
55.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
53.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
52.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
52.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
50.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
50.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
50.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
49.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
48.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
48.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
48.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
47.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
47.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
47.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
45.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
44.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
44.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
44.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
44.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
43.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
43.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
43.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
42.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
42.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
42.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
41.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
41.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
41.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
41.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
40.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
40.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
39.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
39.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
39.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
38.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
38.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
38.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
37.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
37.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
37.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
36.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
35.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
35.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
35.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
35.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
34.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
34.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
33.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
33.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
32.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
32.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
31.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
31.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
31.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
31.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
30.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
29.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
29.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
29.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
29.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
29.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
28.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
28.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
28.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
28.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
27.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
27.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
27.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
27.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
26.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
26.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
26.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
26.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
26.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
25.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
25.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
25.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
25.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
25.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
25.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
25.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
24.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
24.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
24.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
24.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
24.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
24.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
24.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
24.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
24.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
23.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
23.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
23.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
22.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
22.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
21.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
21.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
21.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
21.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
21.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
21.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
21.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
21.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
21.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
20.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
20.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
20.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
20.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
20.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
20.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
20.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
19.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
19.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
19.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
19.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
18.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
18.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
18.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
18.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
18.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
18.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
17.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
17.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
17.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
17.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
17.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
16.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
16.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
16.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
16.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
16.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
15.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
15.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
15.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
14.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
14.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
14.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
13.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
13.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
13.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
13.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
13.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
12.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
12.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
12.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
12.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
12.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
12.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
11.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
11.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
10.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
10.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
10.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
10.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
10.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
9.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
8.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
8.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
8.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
7.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
7.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
6.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
6.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
6.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
5.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
5.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
5.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
5.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
5.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
4.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
4.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
4.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
4.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
4.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
4.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
3.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
3.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
3.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
3.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
3.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
2.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
2.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
2.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
2.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
2.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
2.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
2.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
2.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
1.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
1.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
1.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
1.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
1.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
1.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
1.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
0.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
0.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
0.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
0.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
0.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
0.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
0.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
0.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
0.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
0.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
0.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
0.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
0.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
0.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
0.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
0.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
0.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012770003
Normal
1.4
CPT0012290003
Normal
1.1
CPT0013790003
Normal
1.1
CPT0023710001
Normal
1.0
CPT0087050003
Normal
0.9
CPT0006950001
Normal
0.9
CPT0088640003
Normal
0.9
CPT0023360001
Normal
0.9
CPT0078510003
Tumor
0.9
CPT0086890003
Normal
0.8
CPT0081620001
Normal
0.8
CPT0078840001
Normal
0.8
CPT0092740003
Normal
0.8
CPT0088780001
Normal
0.7
CPT0069010001
Normal
0.7
CPT0006730001
Normal
0.7
CPT0082010001
Normal
0.6
CPT0018250001
Normal
0.6
CPT0026420001
Normal
0.6
CPT0020020001
Normal
0.6
CPT0088710001
Normal
0.6
CPT0007470001
Normal
0.6
CPT0066430001
Normal
0.6
CPT0077500001
Normal
0.5
CPT0014350001
Normal
0.5
CPT0065450001
Normal
0.5
CPT0079000001
Normal
0.5
CPT0000890001
Normal
0.5
CPT0086830003
Normal
0.4
CPT0075570001
Normal
0.4
CPT0012090003
Normal
0.4
CPT0000660001
Normal
0.4
CPT0066470004
Tumor
0.3
CPT0025920001
Normal
0.3
CPT0069190001
Normal
0.3
CPT0000790001
Normal
0.3
CPT0078530001
Normal
0.3
CPT0006530001
Normal
0.2
CPT0024680001
Normal
0.2
CPT0063330001
Normal
0.2
CPT0088500001
Normal
0.2
CPT0078940001
Normal
0.2
CPT0025610001
Normal
0.2
CPT0066520001
Normal
0.1
CPT0066480003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0001550001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0077310003
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0023690003
Tumor
-0.2
CPT0012570003
Normal
-0.2
CPT0079480003
Tumor
-0.2
CPT0000780007
Tumor
-0.3
CPT0002370001
Normal
-0.3
CPT0065870003
Tumor
-0.3
CPT0079430001
Normal
-0.3
CPT0089460004
Tumor
-0.4
CPT0001540009
Tumor
-0.4
CPT0007320003
Tumor
-0.4
CPT0063320003
Tumor
-0.4
CPT0069160003
Tumor
-0.4
CPT0063640001
Normal
-0.5
CPT0065430003
Tumor
-0.5
CPT0087040003
Tumor
-0.6
CPT0086820003
Tumor
-0.6
CPT0078830003
Tumor
-0.6
CPT0006440003
Tumor
-0.6
CPT0014370004
Tumor
-0.6
CPT0084590001
Normal
-0.7
CPT0012640003
Normal
-0.7
CPT0069000003
Tumor
-0.7
CPT0002270011
Tumor
-0.8
CPT0078930003
Tumor
-0.8
CPT0077490003
Tumor
-0.8
CPT0000870016
Tumor
-0.8
CPT0088970003
Tumor
-0.8
CPT0077320001
Normal
-0.9
CPT0006630003
Tumor
-0.9
CPT0019130003
Tumor
-1.0
CPT0084560003
Tumor
-1.0
CPT0088760003
Tumor
-1.0
CPT0075560003
Tumor
-1.0
CPT0088480003
Tumor
-1.0
CPT0006900003
Tumor
-1.0
CPT0078990003
Tumor
-1.1
CPT0088630003
Tumor
-1.1
CPT0012370003
Tumor
-1.1
CPT0012280003
Tumor
-1.1
CPT0023350003
Tumor
-1.1
CPT0012550003
Tumor
-1.2
CPT0092730003
Tumor
-1.2
CPT0025880003
Tumor
-1.2
CPT0002350011
Tumor
-1.2
CPT0011240003
Tumor
-1.2
CPT0079410003
Tumor
-1.3
CPT0088690003
Tumor
-1.3
CPT0079510001
Normal
-1.3
CPT0012080003
Tumor
-1.3
CPT0024670003
Tumor
-1.4
CPT0015910003
Tumor
-1.4
CPT0010110003
Tumor
-1.4
CPT0025580004
Tumor
-1.4
CPT0081990003
Tumor
-1.4
CPT0063630003
Tumor
-1.5
CPT0081600003
Tumor
-1.5
CPT0012670003
Tumor
-1.6
CPT0012180003
Tumor
-1.7
CPT0026410003
Tumor
-1.7
CPT0079180003
Tumor
-1.7
CPT0001180009
Tumor
-1.7
CPT0086870003
Tumor
-1.8
CPT0017850003
Tumor
-1.9
CPT0000640003
Tumor
-3.7
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0076330003
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0007870001
Normal
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0001350001
Normal
N/A
CPT0092190003
Normal
N/A
CPT0088550004
Tumor
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0001510001
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0086950003
Tumor
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0007860003
Tumor
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0009020003
Normal
N/A
CPT0014160003
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0092160003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0014130001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0020130001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0017450001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0078670001
Normal
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0001230001
Normal
N/A
CPT0065810003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0009060003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0086370003
Normal
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
