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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OTUD1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
132.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
77.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
60.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
43.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
38.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
36.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
34.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
30.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
27.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
27.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
25.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
24.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
23.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
23.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
23.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
22.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
21.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
21.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
19.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
18.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
16.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
16.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
15.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
15.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
14.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
14.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
13.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
13.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
12.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
12.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
12.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
11.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
11.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
11.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
11.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
11.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
11.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
10.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
10.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
10.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
10.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
10.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
10.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
10.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
10.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
9.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
9.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
9.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
8.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
8.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
8.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
7.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
6.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
6.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
5.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
5.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
5.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
5.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
5.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
3.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
3.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
2.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OTUD1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
108.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
94.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
47.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
35.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
32.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
32.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
31.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
29.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
28.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
27.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
26.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
25.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
24.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
23.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
23.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
23.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
22.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
22.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
22.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
22.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
22.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
21.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
21.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
21.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
21.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
21.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
20.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
20.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
20.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
20.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
20.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
20.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
20.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
20.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
20.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
20.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
20.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
20.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
19.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
19.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
19.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
19.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
19.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
19.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
19.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
19.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
18.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
18.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
18.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
18.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
18.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
18.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
18.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
18.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
18.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
18.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
18.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
18.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
18.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
17.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
17.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
17.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
17.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
17.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
17.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
17.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
17.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
17.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
17.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
17.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
17.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
17.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
17.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
16.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
16.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
16.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
16.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
16.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
16.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
16.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
16.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
16.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
16.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
16.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
16.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
16.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
16.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
16.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
16.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
16.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
16.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
15.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
15.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
15.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
15.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
15.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
15.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
15.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
15.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
15.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
14.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
14.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
14.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
14.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
14.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
14.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
14.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
14.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
14.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
14.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
14.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
14.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
14.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
14.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
14.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
14.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
14.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
14.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
14.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
14.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
13.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
13.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
13.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
13.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
13.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
13.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
13.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
13.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
13.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
13.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
13.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
13.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
13.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
13.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
13.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
13.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
13.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
13.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
13.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
13.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
13.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
13.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
13.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
13.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
13.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
13.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
13.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
13.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
13.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
13.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
13.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
13.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
13.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
12.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
12.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
12.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
12.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
12.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
12.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
12.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
12.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
12.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
12.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
12.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
12.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
12.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
12.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
12.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
12.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
12.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
12.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
12.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
12.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
12.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
12.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
12.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
12.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
12.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
12.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
11.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
11.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
11.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
11.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
11.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
11.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
11.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
11.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
11.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
11.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
11.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
11.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
11.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
11.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
11.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
11.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
11.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
11.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
11.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
11.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
11.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
11.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
11.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
11.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
11.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
11.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
11.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
11.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
11.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
11.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
11.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
11.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
11.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
11.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
11.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
11.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
11.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
10.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
10.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
10.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
10.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
10.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
10.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
10.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
10.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
10.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
10.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
10.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
10.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
10.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
10.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
10.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
10.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
10.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
10.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
10.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
10.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
10.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
10.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
10.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
10.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
10.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
10.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
10.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
10.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
10.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
10.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
10.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
10.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
10.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
10.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
10.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
10.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
10.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
10.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
10.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
10.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
10.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
9.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
9.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
9.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
9.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
9.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
9.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
9.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
9.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
9.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
9.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
9.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
9.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
9.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
9.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
9.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
9.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
9.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
9.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
9.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
9.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
9.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
9.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
9.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
9.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
9.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
9.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
9.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
9.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
9.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
9.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
9.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
9.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
9.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
9.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
9.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
9.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
9.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
9.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
9.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
9.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
9.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
9.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
9.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
9.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
9.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
9.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
9.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
9.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
9.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
9.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
9.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
9.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
9.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
9.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
8.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
8.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
8.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
8.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
8.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
8.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
8.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
8.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
8.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
8.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
8.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
8.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
8.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
8.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
8.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
8.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
8.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
8.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
8.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
8.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
8.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
8.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
8.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
8.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
8.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
8.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
8.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
8.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
8.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
8.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
8.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
8.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
8.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
8.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
8.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
8.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
8.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
8.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
8.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
7.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
7.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
7.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
7.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
7.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
7.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
7.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
7.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
7.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
7.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
7.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
7.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
7.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
7.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
7.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
7.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
7.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
7.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
7.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
7.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
7.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
7.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
7.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
7.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
7.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
7.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
7.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
7.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
7.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
7.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
7.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
7.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
7.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
7.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
7.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
7.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
7.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
7.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
7.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
7.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
7.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
7.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
7.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
7.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
7.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
7.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
7.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
7.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
7.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
7.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
7.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
7.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
7.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
7.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
6.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
6.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
6.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
6.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
6.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
6.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
6.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
6.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
6.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
6.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
6.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
6.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
6.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
6.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
6.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
6.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
6.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
6.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
6.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
6.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
6.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
6.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
6.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
6.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
6.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
6.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
6.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
6.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
6.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
6.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
6.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
6.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
6.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
6.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
6.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
6.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
6.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
5.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
5.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
5.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
5.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
5.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
5.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
5.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
5.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
5.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
5.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
5.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
5.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
5.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
5.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
5.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
5.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
5.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
5.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
5.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
5.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
5.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
5.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
5.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
5.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
5.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
5.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
5.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
5.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
5.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
5.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
5.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
5.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
4.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
4.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
4.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
4.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
4.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
4.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
4.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
4.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
4.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
4.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
4.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
4.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
4.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
4.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
4.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
4.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
4.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
4.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
4.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
4.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
4.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
4.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
3.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
3.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
3.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
3.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
3.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
3.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
3.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
3.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
3.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
2.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
2.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OTUD1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
31.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
31.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
31.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
30.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
28.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
28.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
26.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
26.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
26.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
26.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
25.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
25.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
23.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
23.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
22.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
22.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
22.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
22.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
22.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
21.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
21.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
21.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
21.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
21.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
20.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
20.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
20.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
20.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
20.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
19.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
19.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
19.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
19.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
19.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
18.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
18.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
18.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
18.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
18.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
17.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
17.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
17.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
16.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
16.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
16.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
16.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
16.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
16.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
16.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
16.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
15.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
15.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
15.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
15.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
15.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
14.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
14.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
13.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
13.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
13.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
13.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
13.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
12.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
12.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
12.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
12.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
12.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
12.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
12.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
11.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
11.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
11.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
11.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
10.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
10.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
10.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
10.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
10.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
10.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
10.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
10.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
9.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
9.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
9.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
9.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
8.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
8.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
8.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
8.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
7.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
7.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
7.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
7.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
7.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
6.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OTUD1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
91.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
78.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
71.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
65.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
64.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
63.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
61.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
55.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
51.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
48.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
45.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
44.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
43.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
43.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
41.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
39.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
37.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
35.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
33.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
32.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
30.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
30.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
29.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
28.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
28.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
24.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
23.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
23.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
22.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
22.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
22.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
21.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
19.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
19.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
19.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
19.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
19.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
19.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
18.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
18.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
18.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
18.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
18.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
18.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
17.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
17.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
17.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
17.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
17.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
17.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
16.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
16.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
16.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
16.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
16.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
16.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
15.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
15.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
15.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
15.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
15.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
14.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
14.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
14.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
14.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
14.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
14.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
14.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
14.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
14.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
13.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
13.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
13.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
13.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
13.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
13.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
13.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
13.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
12.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
12.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
12.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
12.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
12.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
12.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
12.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
12.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
12.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
12.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
12.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
12.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
12.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
12.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
12.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
12.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
11.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
11.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
11.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
11.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
11.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
11.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
11.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
11.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
11.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
11.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
11.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
11.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
11.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
11.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
11.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
11.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
11.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
11.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
10.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
10.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
10.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
10.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
10.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
10.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
10.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
10.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
10.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
10.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
10.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
10.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
10.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
10.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
9.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
9.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
9.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
9.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
9.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
9.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
9.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
9.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
9.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
9.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
9.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
9.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
9.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
9.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
9.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
9.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
9.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
9.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
9.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
9.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
9.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
9.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
9.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
9.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
9.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
9.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
8.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
8.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
8.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
8.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
8.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
8.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
8.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
8.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
8.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
8.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
8.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
8.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
8.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
8.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
8.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
8.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
8.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
8.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
8.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
8.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
8.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
8.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
8.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
8.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
8.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
8.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
8.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
7.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
7.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
7.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
7.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
7.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
7.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
7.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
7.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
7.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
7.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
7.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
7.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
7.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
7.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
7.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
7.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
7.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
7.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
7.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
7.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
7.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
6.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
6.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
6.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
6.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
6.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
6.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
6.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
6.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
6.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
6.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
6.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
6.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
6.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
6.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
6.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
6.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
6.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
6.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
6.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
6.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
6.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
6.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
6.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
6.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
6.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
6.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
6.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
6.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
6.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
5.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
5.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
5.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
5.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
5.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
5.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
5.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
5.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
5.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
5.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
5.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
5.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
5.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
5.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
5.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
5.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
5.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
5.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
5.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
4.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
4.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
4.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
4.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
4.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
4.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
4.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
4.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
4.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
4.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
3.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
3.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
3.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
3.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
3.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
3.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
3.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
3.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
3.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
3.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
3.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
3.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
2.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
2.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
1.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
1.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
1.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002270011
Tumor
2.4
CPT0092290003
Tumor
1.4
CPT0000780007
Tumor
1.2
CPT0006440003
Tumor
0.8
CPT0014160003
Tumor
0.8
CPT0088970003
Tumor
0.8
CPT0001340003
Tumor
0.7
CPT0077490003
Tumor
0.6
CPT0000660001
Normal
0.5
CPT0066480003
Tumor
0.5
CPT0025110003
Tumor
0.5
CPT0079480003
Tumor
0.5
CPT0012770003
Normal
0.4
CPT0084560003
Tumor
0.4
CPT0000640003
Tumor
0.4
CPT0075170001
Normal
0.4
CPT0065870003
Tumor
0.4
CPT0006730001
Normal
0.4
CPT0078530001
Normal
0.4
CPT0006630003
Tumor
0.4
CPT0063320003
Tumor
0.4
CPT0078940001
Normal
0.3
CPT0023360001
Normal
0.3
CPT0010160003
Tumor
0.3
CPT0007870001
Normal
0.3
CPT0088900003
Tumor
0.3
CPT0077310003
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0087050003
Normal
0.3
CPT0075560003
Tumor
0.3
CPT0063640001
Normal
0.3
CPT0006900003
Tumor
0.3
CPT0079270003
Tumor
0.2
CPT0010170001
Normal
0.2
CPT0088780001
Normal
0.2
CPT0007470001
Normal
0.2
CPT0092190003
Normal
0.2
CPT0081990003
Tumor
0.2
CPT0015910003
Tumor
0.2
CPT0088500001
Normal
0.2
CPT0026420001
Normal
0.2
CPT0077320001
Normal
0.2
CPT0077140001
Normal
0.2
CPT0020020001
Normal
0.2
CPT0078830003
Tumor
0.2
CPT0088570001
Normal
0.2
CPT0069190001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0001540009
Tumor
0.1
CPT0011410003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0025920001
Normal
0.1
CPT0025350003
Tumor
0.1
CPT0089480003
Normal
0.1
CPT0078660003
Tumor
0.1
CPT0082010001
Normal
0.1
CPT0066430001
Normal
0.1
CPT0088550004
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0088710001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0092740003
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0006950001
Normal
0.1
CPT0088640003
Normal
0.1
CPT0078840001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0077500001
Normal
0.1
CPT0089040001
Normal
0.1
CPT0079430001
Normal
0.1
CPT0010120001
Normal
0.0
CPT0088630003
Tumor
0.0
CPT0075720003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0088920001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0023690003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0086950003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0063330001
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0065430003
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0081620001
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0079510001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0011240003
Tumor
-0.1
CPT0071150004
Tumor
-0.1
CPT0079180003
Tumor
-0.1
CPT0026410003
Tumor
-0.1
CPT0014450004
Tumor
-0.1
CPT0023350003
Tumor
-0.1
CPT0001180009
Tumor
-0.1
CPT0012290003
Normal
-0.1
CPT0012640003
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0081880003
Tumor
-0.2
CPT0092310003
Normal
-0.2
CPT0086870003
Tumor
-0.2
CPT0025880003
Tumor
-0.2
CPT0076350001
Normal
-0.2
CPT0081600003
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0014130001
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0069000003
Tumor
-0.2
CPT0025050003
Tumor
-0.2
CPT0020120003
Tumor
-0.2
CPT0001260009
Tumor
-0.2
CPT0066520001
Normal
-0.2
CPT0007320003
Tumor
-0.3
CPT0077110003
Tumor
-0.3
CPT0063630003
Tumor
-0.3
CPT0079410003
Tumor
-0.3
CPT0012370003
Tumor
-0.3
CPT0088480003
Tumor
-0.3
CPT0010110003
Tumor
-0.3
CPT0064370003
Tumor
-0.3
CPT0024680001
Normal
-0.3
CPT0089020003
Tumor
-0.3
CPT0066470004
Tumor
-0.3
CPT0012080003
Tumor
-0.4
CPT0000790001
Normal
-0.4
CPT0025170003
Tumor
-0.4
CPT0086830003
Normal
-0.4
CPT0069010001
Normal
-0.4
CPT0012180003
Tumor
-0.4
CPT0018250001
Normal
-0.4
CPT0075130003
Tumor
-0.4
CPT0089460004
Tumor
-0.5
CPT0012550003
Tumor
-0.5
CPT0065450001
Normal
-0.5
CPT0012280003
Tumor
-0.5
CPT0017850003
Tumor
-0.5
CPT0065690003
Tumor
-0.5
CPT0088690003
Tumor
-0.5
CPT0086820003
Tumor
-0.5
CPT0007860003
Tumor
-0.5
CPT0092730003
Tumor
-0.5
CPT0078930003
Tumor
-0.6
CPT0024670003
Tumor
-0.6
CPT0076330003
Tumor
-0.6
CPT0012670003
Tumor
-0.9
CPT0069160003
Tumor
-0.9
CPT0025290003
Tumor
-0.9
CPT0078510003
Tumor
-2.2
CPT0019130003
Tumor
N/A
CPT0065820001
Normal
N/A
CPT0078800003
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0079380003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025230003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0001510001
Normal
N/A
CPT0014350001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0079230003
Tumor
N/A
CPT0009000003
Tumor
N/A
CPT0015810003
Tumor
N/A
CPT0009020003
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0086030003
Tumor
N/A
CPT0017450001
Normal
N/A
CPT0019160001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0085670003
Tumor
N/A
CPT0009060003
Tumor
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
