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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NDUFB6 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
60.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
155.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
154.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
117.6
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
109.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
108.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
105.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
104.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
103.9
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
103.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
102.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
101.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
101.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
101.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
100.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
97.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
96.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
96.4
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
95.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
95.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
95.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
94.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
94.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
93.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
93.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
92.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
92.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
91.8
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
91.7
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
91.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
91.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
91.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
91.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
91.5
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
90.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
90.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
90.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
90.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
89.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
89.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
89.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
88.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
88.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
88.1
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
87.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
87.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
87.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
86.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
85.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
84.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
84.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
84.4
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
84.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
83.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
83.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
82.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
82.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
81.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
81.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
81.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
80.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
80.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
79.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
79.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
79.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
79.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
79.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
78.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
78.4
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
78.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
78.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
77.9
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
77.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
77.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
77.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
76.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
76.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
76.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
75.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
75.8
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
75.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
75.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
74.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
74.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
74.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
74.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
74.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
74.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
74.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
73.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
72.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
72.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
72.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
72.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
72.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
72.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
72.2
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
71.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
71.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
71.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
71.4
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
71.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
70.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
70.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
70.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
70.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
70.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
70.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
70.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
69.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
69.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
68.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
67.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
67.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
66.8
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
66.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
66.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
66.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
66.1
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
65.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
65.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
65.7
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
65.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
65.3
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
65.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
65.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
64.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
64.8
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
64.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
64.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
64.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
64.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
64.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
64.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
64.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
64.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
64.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
64.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
63.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
63.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
63.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
63.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
63.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
63.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
63.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
63.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
63.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
63.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
63.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
62.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
62.5
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
62.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
62.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
62.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
62.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
62.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
62.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
62.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
61.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
61.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
61.3
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
61.3
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
61.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
61.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
60.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
60.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
60.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
60.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
60.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
60.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
60.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
60.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
59.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
59.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
59.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
59.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
59.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
58.8
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
58.7
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
58.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
58.4
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
58.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
58.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
58.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
58.1
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
57.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
57.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
57.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
57.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
57.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
57.4
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
57.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
57.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
57.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
57.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
57.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
56.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
56.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
56.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
56.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
56.3
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
56.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
56.0
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
55.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
55.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
55.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
55.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
55.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
55.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
54.9
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
54.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
54.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
54.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
54.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
54.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
54.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
54.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
54.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
53.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
53.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
53.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
53.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
53.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
53.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
53.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
53.0
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
52.9
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
52.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
52.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
52.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
52.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
52.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
51.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
51.2
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
51.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
51.1
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
51.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
51.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
50.7
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
50.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
50.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
50.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
49.9
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
49.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
49.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
49.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
49.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
49.2
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
49.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
49.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
48.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
48.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
48.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
48.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
48.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
48.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
48.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
48.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
48.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
47.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
47.5
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
47.5
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
47.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
47.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
46.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
46.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
46.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
46.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
46.6
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
46.3
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
46.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
46.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
46.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
45.2
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
44.9
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
44.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
44.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
44.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
44.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
44.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
44.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
44.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
44.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
43.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
43.6
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
43.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
43.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
43.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
42.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
42.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
42.6
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
42.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
42.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
42.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
42.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
42.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
41.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
41.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
41.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
41.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
41.4
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
41.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
41.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
40.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
40.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
40.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
40.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
39.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
39.8
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
39.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
39.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
39.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
38.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
38.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
37.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
37.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
37.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
37.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
36.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
36.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
36.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
36.5
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
36.4
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
36.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
36.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
36.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
35.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
35.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
35.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
35.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
35.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
35.3
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
35.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
34.9
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
34.7
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
34.4
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
34.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
32.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
32.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
32.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
32.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
31.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
30.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
30.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
30.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
29.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
28.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
28.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
28.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
28.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
27.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
27.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
27.4
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
27.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
26.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
25.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
24.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
22.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
22.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
20.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
18.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
15.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NDUFB6 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
46.5
Number of samples
231
Samples
Sample
Description
TPM
DO48701
0 years, male, NA, stage:2, alive, 780 days
197.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
193.6
DO23508
0 years, female, NA, stage:2, alive, 390 days
120.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
105.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
94.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
90.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
88.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
88.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
81.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
81.8
DO23525
0 years, male, NA, stage:4, alive, 1050 days
81.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
80.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
79.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
77.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
74.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
70.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
70.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
70.2
DO48741
0 years, male, NA, stage:3, alive, 240 days
69.8
DO45183
0 years, female, NA, stage:2, dead, 570 days
69.6
DO50791
0 years, female, NA, stage:1, dead, 480 days
68.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
66.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
65.7
DO50857
0 years, male, NA, stage:2, alive, 210 days
65.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
64.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
64.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
64.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
64.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
64.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
63.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
63.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
63.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
62.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
62.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
61.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
61.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
61.8
DO50859
0 years, male, NA, stage:2, alive, 180 days
61.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
61.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
61.4
DO48717
0 years, male, NA, stage:4, dead, 180 days
61.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
60.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
59.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
59.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
59.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
59.2
DO23518
0 years, male, NA, stage:2, alive, 1320 days
59.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
58.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
58.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
58.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
57.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
57.4
DO50818
0 years, male, NA, stage:2, alive, 510 days
56.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
56.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
56.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
56.2
DO50814
0 years, male, NA, stage:3, alive, 420 days
56.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
56.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
56.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
55.9
DO45123
0 years, female, NA, stage:2, dead, 570 days
55.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
55.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
55.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
55.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
55.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
55.1
DO45149
0 years, female, NA, stage:2, alive, 1260 days
55.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
55.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
55.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
54.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
54.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
54.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
54.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
54.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
54.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
53.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
53.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
53.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
52.8
DO48725
0 years, male, NA, stage:1, alive, 780 days
52.6
DO48677
0 years, male, NA, stage:3, alive, 1140 days
51.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
51.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
51.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
51.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
50.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
50.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
50.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
50.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
49.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
48.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
48.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
48.3
DO45179
0 years, female, NA, stage:2, alive, 600 days
48.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
48.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
47.9
DO50804
0 years, male, NA, stage:2, alive, 720 days
47.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
47.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
47.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
46.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
46.1
DO50811
0 years, male, NA, stage:1, alive, 450 days
45.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
45.7
DO45127
0 years, male, NA, stage:3, dead, 420 days
45.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
45.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
44.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
44.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
44.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
44.4
DO50805
0 years, male, NA, stage:2, alive, 690 days
44.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
44.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
43.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
43.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
42.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
42.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
42.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
42.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
42.7
DO48700
0 years, female, NA, stage:2, alive, 810 days
42.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
42.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
42.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
41.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
41.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
41.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
41.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
41.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
41.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
41.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
40.9
DO45159
0 years, male, NA, stage:3, alive, 1470 days
40.8
DO48693
0 years, male, NA, stage:2, alive, 900 days
40.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
40.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
40.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
40.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
40.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
39.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
39.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
38.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
38.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
38.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
38.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
38.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
37.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
37.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
36.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
36.8
DO23550
0 years, male, NA, stage:1, alive, 990 days
36.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
36.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
36.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
36.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
36.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
36.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
36.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
36.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
35.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
35.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
35.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
35.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
35.4
DO50800
0 years, male, NA, stage:2, alive, 510 days
35.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
35.1
DO50785
0 years, male, NA, stage:4, dead, 90 days
35.0
DO23542
0 years, male, NA, stage:3, alive, 960 days
34.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
34.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
34.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
34.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
34.2
DO45223
0 years, male, NA, stage:4, alive, 1020 days
34.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
34.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
34.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
34.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
33.9
DO48730
0 years, female, NA, stage:2, alive, 630 days
33.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
33.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
33.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
32.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
32.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
32.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
32.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
32.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
31.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
31.1
DO45215
0 years, male, NA, stage:2, alive, 1170 days
31.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
30.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
30.4
DO50816
0 years, male, NA, stage:2, alive, 390 days
30.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
30.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
30.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
29.9
DO23517
0 years, male, NA, stage:2, alive, 1200 days
29.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
29.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
29.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
29.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
29.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
28.7
DO45105
0 years, male, NA, stage:1, alive, 1680 days
28.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
27.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
27.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
27.5
DO45267
0 years, male, NA, stage:3, dead, 570 days
27.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
27.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
26.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
26.6
DO45283
0 years, male, NA, stage:3, alive, 510 days
26.5
DO45273
0 years, male, NA, stage:2, alive, 480 days
25.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
25.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
25.3
DO45137
0 years, male, NA, stage:1, alive, 1320 days
25.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
25.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
24.7
DO45189
0 years, female, NA, stage:2, alive, 1200 days
24.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
24.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
24.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
24.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
23.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
23.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
23.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
23.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
22.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
21.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
20.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
20.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
19.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
19.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
18.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
18.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
18.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
18.1
DO48733
0 years, male, NA, stage:2, alive, 600 days
18.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
17.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
16.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
12.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
1041
Tumor
1.1
514
Normal
0.7
484
Normal
0.7
473
Tumor
0.7
944
Normal
0.7
1043
Tumor
0.7
915
Tumor
0.7
356
Normal
0.7
922
Normal
0.7
571
Tumor
0.7
981
Tumor
0.6
327
Tumor
0.6
958
Normal
0.6
627
Tumor
0.6
1014
Normal
0.6
448
Normal
0.6
128
Normal
0.6
615
Tumor
0.6
494
Normal
0.6
1032
Normal
0.6
926
Normal
0.6
756
Normal
0.6
1046
Normal
0.6
278
Normal
0.6
698
Normal
0.5
314
Normal
0.5
231
Tumor
0.5
516
Normal
0.5
466
Normal
0.5
982
Normal
0.5
1022
Normal
0.5
482
Normal
0.5
738
Normal
0.5
212
Normal
0.5
487
Tumor
0.5
328
Normal
0.5
918
Normal
0.5
864
Normal
0.5
954
Normal
0.5
488
Normal
0.5
616
Normal
0.5
728
Normal
0.5
451
Tumor
0.5
564
Normal
0.5
528
Normal
0.5
171
Tumor
0.5
742
Normal
0.5
518
Normal
0.5
388
Normal
0.5
722
Normal
0.5
526
Normal
0.5
861
Tumor
0.5
964
Normal
0.4
412
Normal
0.4
938
Normal
0.4
648
Normal
0.4
984
Normal
0.4
1028
Normal
0.4
866
Normal
0.4
364
Normal
0.4
415
Tumor
0.4
162
Normal
0.4
714
Normal
0.4
642
Normal
0.4
912
Normal
0.4
312
Normal
0.4
628
Normal
0.4
232
Normal
0.4
666
Normal
0.4
267
Tumor
0.4
462
Normal
0.4
416
Normal
0.4
858
Normal
0.4
464
Normal
0.4
132
Normal
0.4
723
Tumor
0.4
636
Normal
0.4
664
Normal
0.4
914
Normal
0.4
358
Normal
0.4
713
Tumor
0.4
916
Normal
0.4
1042
Normal
0.4
878
Normal
0.4
446
Normal
0.4
491
Tumor
0.4
258
Normal
0.4
818
Normal
0.4
546
Normal
0.4
913
Tumor
0.4
865
Tumor
0.4
824
Normal
0.3
696
Normal
0.3
716
Normal
0.3
816
Normal
0.3
554
Normal
0.3
524
Normal
0.3
778
Normal
0.3
111
Normal
0.3
114
Normal
0.3
394
Normal
0.3
396
Normal
0.3
572
Normal
0.3
426
Normal
0.3
1031
Tumor
0.3
355
Tumor
0.3
148
Normal
0.3
272
Normal
0.3
228
Normal
0.3
393
Tumor
0.3
1044
Normal
0.3
172
Normal
0.3
956
Normal
0.3
697
Tumor
0.3
284
Normal
0.3
911
Tumor
0.3
558
Normal
0.3
376
Normal
0.3
432
Normal
0.3
262
Normal
0.3
474
Normal
0.3
686
Normal
0.3
222
Normal
0.3
952
Normal
0.3
978
Normal
0.3
481
Tumor
0.3
424
Normal
0.3
468
Normal
0.3
924
Normal
0.3
852
Normal
0.3
1027
Tumor
0.3
968
Normal
0.3
1026
Normal
0.2
786
Normal
0.2
286
Normal
0.2
568
Normal
0.2
497
Tumor
0.2
472
Normal
0.2
456
Normal
0.2
868
Normal
0.2
422
Normal
0.2
362
Normal
0.2
1016
Normal
0.2
342
Normal
0.2
366
Normal
0.2
695
Tumor
0.2
112
Tumor
0.2
196
Normal
0.2
436
Normal
0.2
136
Normal
0.2
1021
Tumor
0.2
965
Tumor
0.2
662
Normal
0.2
478
Normal
0.2
214
Normal
0.2
746
Normal
0.2
785
Tumor
0.2
617
Tumor
0.2
138
Normal
0.2
127
Tumor
0.2
146
Normal
0.2
493
Tumor
0.2
357
Tumor
0.2
955
Tumor
0.2
145
Tumor
0.2
452
Normal
0.2
618
Normal
0.2
534
Normal
0.2
392
Normal
0.2
862
Normal
0.2
298
Normal
0.1
538
Normal
0.1
976
Normal
0.1
126
Normal
0.1
525
Tumor
0.1
268
Normal
0.1
663
Tumor
0.1
414
Normal
0.1
1045
Tumor
0.1
188
Normal
0.1
536
Normal
0.1
882
Normal
0.1
344
Normal
0.1
423
Tumor
0.1
195
Tumor
0.1
498
Normal
0.1
224
Normal
0.1
352
Normal
0.1
966
Normal
0.1
142
Normal
0.1
386
Normal
0.1
874
Normal
0.1
937
Tumor
0.1
755
Tumor
0.1
411
Tumor
0.1
492
Normal
0.1
428
Normal
0.1
354
Normal
0.1
574
Normal
0.1
923
Tumor
0.1
715
Tumor
0.1
227
Tumor
0.0
963
Tumor
0.0
1015
Tumor
0.0
953
Tumor
0.0
721
Tumor
0.0
341
Tumor
0.0
332
Normal
0.0
977
Tumor
0.0
483
Tumor
0.0
647
Tumor
0.0
261
Tumor
0.0
533
Tumor
0.0
867
Tumor
0.0
218
Normal
0.0
527
Tumor
0.0
444
Normal
0.0
1025
Tumor
0.0
672
Normal
0.0
434
Normal
0.0
967
Tumor
0.0
124
Normal
0.0
557
Tumor
0.0
257
Tumor
-0.1
975
Tumor
-0.1
553
Tumor
-0.1
477
Tumor
-0.1
873
Tumor
-0.1
1013
Tumor
-0.1
957
Tumor
-0.1
943
Tumor
-0.1
384
Normal
-0.1
135
Tumor
-0.1
857
Tumor
-0.1
823
Tumor
-0.1
313
Tumor
-0.1
641
Tumor
-0.1
113
Tumor
-0.1
161
Tumor
-0.1
223
Tumor
-0.1
368
Normal
-0.1
884
Normal
-0.1
517
Tumor
-0.1
745
Tumor
-0.1
186
Normal
-0.1
741
Tumor
-0.1
363
Tumor
-0.1
463
Tumor
-0.1
221
Tumor
-0.1
192
Normal
-0.1
724
Normal
-0.1
271
Tumor
-0.2
743
Tumor
-0.2
815
Tumor
-0.2
635
Tumor
-0.2
361
Tumor
-0.2
285
Tumor
-0.2
573
Tumor
-0.2
921
Tumor
-0.2
447
Tumor
-0.2
465
Tumor
-0.2
567
Tumor
-0.2
744
Normal
-0.2
461
Tumor
-0.2
413
Tumor
-0.2
365
Tumor
-0.2
217
Tumor
-0.2
563
Tumor
-0.2
445
Tumor
-0.2
191
Tumor
-0.2
467
Tumor
-0.2
877
Tumor
-0.2
523
Tumor
-0.3
863
Tumor
-0.3
515
Tumor
-0.3
817
Tumor
-0.3
187
Tumor
-0.3
277
Tumor
-0.3
141
Tumor
-0.3
777
Tumor
-0.3
427
Tumor
-0.3
537
Tumor
-0.3
881
Tumor
-0.3
917
Tumor
-0.3
213
Tumor
-0.3
513
Tumor
-0.3
131
Tumor
-0.3
535
Tumor
-0.3
351
Tumor
-0.3
367
Tumor
-0.3
665
Tumor
-0.3
727
Tumor
-0.4
443
Tumor
-0.4
353
Tumor
-0.4
925
Tumor
-0.4
211
Tumor
-0.4
185
Tumor
-0.4
737
Tumor
-0.4
471
Tumor
-0.4
883
Tumor
-0.4
395
Tumor
-0.4
433
Tumor
-0.4
851
Tumor
-0.4
147
Tumor
-0.4
983
Tumor
-0.4
383
Tumor
-0.4
435
Tumor
-0.4
343
Tumor
-0.4
387
Tumor
-0.4
814
Normal
-0.5
421
Tumor
-0.5
685
Tumor
-0.5
391
Tumor
-0.5
137
Tumor
-0.5
123
Tumor
-0.5
951
Tumor
-0.5
431
Tumor
-0.5
375
Tumor
-0.5
545
Tumor
-0.6
385
Tumor
-0.6
311
Tumor
-0.6
331
Tumor
-0.6
125
Tumor
-0.6
671
Tumor
-0.7
813
Tumor
-0.7
283
Tumor
-0.7
455
Tumor
-0.7
297
Tumor
-0.7
661
Tumor
-0.7
425
Tumor
-0.8
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
